Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Other IDs Protein Associated diseases
Entrez ID	203238
Gene name	Coiled-coil domain containing 171
Gene symbol	CCDC171
Synonyms (NCBI Gene)	C9orf93bA536D16.1bA778P13.1
Chromosome	9
Chromosome location	9p22.3

Show/Hide all (62)

miRTarBase ID	miRNA	Experiments	Reference
MIRT624409	hsa-miR-4282	HITS-CLIP	23824327
MIRT624407	hsa-miR-302b-5p	HITS-CLIP	23824327
MIRT624406	hsa-miR-302d-5p	HITS-CLIP	23824327
MIRT624405	hsa-miR-4753-3p	HITS-CLIP	23824327
MIRT624404	hsa-miR-6832-3p	HITS-CLIP	23824327
MIRT659768	hsa-miR-875-5p	HITS-CLIP	23824327
MIRT659767	hsa-miR-25-3p	HITS-CLIP	23824327
MIRT659766	hsa-miR-32-5p	HITS-CLIP	23824327
MIRT659765	hsa-miR-363-3p	HITS-CLIP	23824327
MIRT659764	hsa-miR-367-3p	HITS-CLIP	23824327
MIRT659763	hsa-miR-92a-3p	HITS-CLIP	23824327
MIRT659762	hsa-miR-92b-3p	HITS-CLIP	23824327
MIRT659761	hsa-miR-1306-5p	HITS-CLIP	23824327
MIRT659760	hsa-miR-6801-3p	HITS-CLIP	23824327
MIRT659759	hsa-miR-6810-3p	HITS-CLIP	23824327
MIRT659758	hsa-miR-6892-3p	HITS-CLIP	23824327
MIRT659757	hsa-miR-2276-5p	HITS-CLIP	23824327
MIRT659756	hsa-miR-4469	HITS-CLIP	23824327
MIRT659755	hsa-miR-3130-3p	HITS-CLIP	23824327
MIRT659754	hsa-miR-600	HITS-CLIP	23824327
MIRT659753	hsa-miR-6804-3p	HITS-CLIP	23824327
MIRT659752	hsa-miR-642a-5p	HITS-CLIP	23824327
MIRT659751	hsa-miR-500a-3p	HITS-CLIP	23824327
MIRT659750	hsa-miR-33a-5p	HITS-CLIP	23824327
MIRT659749	hsa-miR-33b-5p	HITS-CLIP	23824327
MIRT624409	hsa-miR-4282	HITS-CLIP	23824327
MIRT624408	hsa-miR-130b-5p	HITS-CLIP	23824327
MIRT624407	hsa-miR-302b-5p	HITS-CLIP	23824327
MIRT624406	hsa-miR-302d-5p	HITS-CLIP	23824327
MIRT624405	hsa-miR-4753-3p	HITS-CLIP	23824327
MIRT624404	hsa-miR-6832-3p	HITS-CLIP	23824327
MIRT624409	hsa-miR-4282	HITS-CLIP	23824327
MIRT624407	hsa-miR-302b-5p	HITS-CLIP	23824327
MIRT624406	hsa-miR-302d-5p	HITS-CLIP	23824327
MIRT624405	hsa-miR-4753-3p	HITS-CLIP	23824327
MIRT624404	hsa-miR-6832-3p	HITS-CLIP	23824327
MIRT659768	hsa-miR-875-5p	HITS-CLIP	23824327
MIRT659767	hsa-miR-25-3p	HITS-CLIP	23824327
MIRT659766	hsa-miR-32-5p	HITS-CLIP	23824327
MIRT659765	hsa-miR-363-3p	HITS-CLIP	23824327
MIRT659764	hsa-miR-367-3p	HITS-CLIP	23824327
MIRT659763	hsa-miR-92a-3p	HITS-CLIP	23824327
MIRT659762	hsa-miR-92b-3p	HITS-CLIP	23824327
MIRT659761	hsa-miR-1306-5p	HITS-CLIP	23824327
MIRT659760	hsa-miR-6801-3p	HITS-CLIP	23824327
MIRT659759	hsa-miR-6810-3p	HITS-CLIP	23824327
MIRT659758	hsa-miR-6892-3p	HITS-CLIP	23824327
MIRT659757	hsa-miR-2276-5p	HITS-CLIP	23824327
MIRT659756	hsa-miR-4469	HITS-CLIP	23824327
MIRT659755	hsa-miR-3130-3p	HITS-CLIP	23824327
MIRT659754	hsa-miR-600	HITS-CLIP	23824327
MIRT659753	hsa-miR-6804-3p	HITS-CLIP	23824327
MIRT659752	hsa-miR-642a-5p	HITS-CLIP	23824327
MIRT659751	hsa-miR-500a-3p	HITS-CLIP	23824327
MIRT659750	hsa-miR-33a-5p	HITS-CLIP	23824327
MIRT659749	hsa-miR-33b-5p	HITS-CLIP	23824327
MIRT624409	hsa-miR-4282	HITS-CLIP	23824327
MIRT624408	hsa-miR-130b-5p	HITS-CLIP	23824327
MIRT624407	hsa-miR-302b-5p	HITS-CLIP	23824327
MIRT624406	hsa-miR-302d-5p	HITS-CLIP	23824327
MIRT624405	hsa-miR-4753-3p	HITS-CLIP	23824327
MIRT624404	hsa-miR-6832-3p	HITS-CLIP	23824327

MIM	HGNC	e!Ensembl
HGNC	N/A	HGNC

Q6TFL3

Protein name

Coiled-coil domain-containing protein 171

Family and domains

Sequence

MNLNTSSNTGDTQRLKIASLDVKQILKNETELDITDNLRKKLHWAKKEKLEITTKHNAEL
ASYESQIAKLRSEVEKGEALRQSLEYDLAVARKEAGLGRRAAEERLAEAHRIQEKLCAQN
SELQAKTNETEKAFQTSQQKWKEECRRFEHDLEERDNMIQNCNREYDLLMKEKSRLEKTL
QEALEKHQREKNEMESHIRETALEEFRLQEEQWEAERRELQFIVQEQDTAVQNMHKKVEK
LETEHMDCSDLLRRQTSELEFSTQREERLRKEFEATTLRVRKLEENIEAERAAHLESKFN
SEIIQLRIRDLEGALQVEKASQAEAVADLEIIKNEFKEVESAYEREKHNAQESFAKLNLL
EKEYFSKNKKLNEDIEEQKKVIIDLSKRLQYNEKSCSELQEELVMAKKHQAFLVETCENN
VKELESILDSFTVSGQWTSGIHKDKDKPPSFSVVLERLRRTLTDYQNKLEDASNEEKACN
ELDSTKQKIDSHTKNIKELQDKLADVNKELSHLHTKCADREALISTLKVELQNVLHCWEK
EKAQAAQSESELQKLSQAFHKDAEEKLTFLHTLYQHLVAGCVLIKQPEGMLDKFSWSELC
AVLQENVDALIADLNRANEKIRHLEYICKNKSDTMRELQQTQEDTFTKVAEQIKAQESCW
HRQKKELELQYSELFLEVQKRAQKFQEIAEKNMEKLNHIEKSHEQLVLENSHFKKLLSQT
QREQMSLLAACALMAGALYPLYSRSCALSTQRDFLQEQVNTFELFKLEIRTLAQALSTVE
EKKQEEAKMKKKTFKGLIRIFRKGVIAVLAANRLKILGQSCASLFTWMESFKEGIGMLVC
TGEPQDKHKFPKHQKEQLRCLQALSWLTSSDLLAAIISSMAELQDVIGKADPNSRICGHL
LIGAAKNSFAKLMDKISLVMECIPLHSSRSITYVEKDSLVQRLAHGLHKVNTLALKYGLR
GHVPITKSTASLQKQILGFTQRLHAAEVERRSLRLEVTEFKRSVNEMKKELDKAQGLQMQ
LNEFKQSKLITHEKFESACEELNNALLREEQAQMLLNEQAQQLQELNYKLELHSSEEADK
NQTLGEAVKSLSEAKMELRRKDQSLRQLNRHLTQLEQDKRRLEENIHDAESALRMAAKDK
ECVANHMRAVENTLHKVRDQISLSWSAASRNDFTLQLPKLHLETFAMEGLKGGPEVVACQ
AMIKSFMDVYQLASTRIMTLEKEMTSHRSHIAALKSELHTACLRENASLQSIGSRDHSNL
SIPSRAPLPADTTGIGDFLPLKAELDTTYTFLKETFINTVPHALTSSHSSPVTMSANANR
PTQIGL

Sequence length

1326

Interactions

View interactions

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Unknown Diseases (16)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
ALZHEIMER DISEASE	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
ATRIAL FIBRILLATION	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
ATTENTION DEFICIT HYPERACTIVITY DISORDER	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
BRAIN ANEURYSM	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
BREAST CANCER	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
BREAST CARCINOMA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
COLOR VISION DISORDER	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
DEMENTIA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
DYSLEXIA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
HEART FAILURE	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
LUMINAL A BREAST CARCINOMA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
METABOLIC SYNDROME	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Ovarian serous cystadenocarcinoma	Uncertain significance	ClinVar	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Prostate cancer	Uncertain significance	ClinVar	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
SCOLIOSIS	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
TYPE 2 DIABETES MELLITUS	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Show/Hide Text Mining Associations (1)

Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Associations from Text Mining Disease associations identified through text mining
Obesity	Obesity	BEFREE	29477148		★★★★★ ★☆☆☆☆ Found in Text Mining only

CCDC171 (coiled-coil domain containing 171)