Gene Gene information from NCBI Gene database.
Entrez ID 199857
Gene name ALG14 UDP-N-acetylglucosaminyltransferase subunit
Gene symbol ALG14
Synonyms (NCBI Gene)
CMS15IDDEBFMEPCA
Chromosome 1
Chromosome location 1p21.3
Summary This gene is a member of the glycosyltransferase 1 family. The encoded protein and ALG13 are thought to be subunits of UDP-GlcNAc transferase, which catalyzes the first two committed steps in endoplasmic reticulum N-linked glycosylation. Mutations in this
SNPs SNP information provided by dbSNP.
1
SNP ID Visualize variation Clinical significance Consequence
rs139521179 C>A,T Conflicting-interpretations-of-pathogenicity Non coding transcript variant, missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
228
miRTarBase ID miRNA Experiments Reference
MIRT705779 hsa-miR-6502-3p HITS-CLIP 23313552
MIRT705778 hsa-miR-6888-5p HITS-CLIP 23313552
MIRT705777 hsa-miR-128-3p HITS-CLIP 23313552
MIRT705776 hsa-miR-216a-3p HITS-CLIP 23313552
MIRT705775 hsa-miR-3681-3p HITS-CLIP 23313552
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
13
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 36200043
GO:0005783 Component Endoplasmic reticulum IEA
GO:0005789 Component Endoplasmic reticulum membrane IEA
GO:0005789 Component Endoplasmic reticulum membrane TAS
GO:0006487 Process Protein N-linked glycosylation IDA 36200043
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
612866 28287 ENSG00000172339
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q96F25
Protein name UDP-N-acetylglucosamine transferase subunit ALG14 (Asparagine-linked glycosylation 14 homolog)
Protein function Part of the UDP-N-acetylglucosamine transferase complex that operates in the biosynthetic pathway of dolichol-linked oligosaccharides, the glycan precursors employed in protein asparagine (N)-glycosylation. The assembly of dolichol-linked oligos
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF08660 Alg14 39 215 Oligosaccharide biosynthesis protein Alg14 like Family
Sequence
Sequence length 216
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  N-Glycan biosynthesis
Various types of N-glycan biosynthesis
Metabolic pathways
  Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
Defective ALG14 causes congenital myasthenic syndrome (ALG14-CMS)
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
24
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Congenital myasthenic syndrome 15 Pathogenic rs730882050 RCV000161136
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ALG14-related disorder Likely benign; Uncertain significance; Conflicting classifications of pathogenicity; Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BIPOLAR DISORDER GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cholangiocarcinoma Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Chronic lymphocytic leukemia/small lymphocytic lymphoma Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Blepharoptosis Ptosis HPO_DG
★☆☆☆☆
Found in Text Mining only
Byzanthine arch palate High palate HPO_DG
★☆☆☆☆
Found in Text Mining only
Clumsiness - motor delay Motor delay HPO_DG
★☆☆☆☆
Found in Text Mining only
Congenital Disorders of Glycosylation Congenital disorder of glycosylation Pubtator 28733338, 35327592 Associate
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Congenital myasthenic syndromes with glycosylation defect Congenital Myasthenic Syndromes With Glycosylation Defect Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Congenital Myasthenic Syndromes, Postsynaptic Myasthenic Syndrome CTD_human_DG
★☆☆☆☆
Found in Text Mining only
Congenital Myasthenic Syndromes, Presynaptic Myasthenic Syndrome CTD_human_DG
★☆☆☆☆
Found in Text Mining only
Epilepsy Epilepsy Pubtator 28733338 Associate
★☆☆☆☆
Found in Text Mining only
Facial paralysis Facial paralysis HPO_DG
★☆☆☆☆
Found in Text Mining only
Intellectual Disability Mental retardation GENOMICS_ENGLAND_DG 28733338
★☆☆☆☆
Found in Text Mining only