Gene Gene information from NCBI Gene database.
Entrez ID 1991
Gene name Elastase, neutrophil expressed
Gene symbol ELANE
Synonyms (NCBI Gene)
ELA2GEHLEHNENEPMN-ESCN1
Chromosome 19
Chromosome location 19p13.3
Summary Elastases form a subfamily of serine proteases that hydrolyze many proteins in addition to elastin. Humans have six elastase genes which encode structurally similar proteins. The encoded preproprotein is proteolytically processed to generate the active pr
SNPs SNP information provided by dbSNP.
40
SNP ID Visualize variation Clinical significance Consequence
rs28931611 T>C Pathogenic Coding sequence variant, missense variant
rs57246956 G>A,T Pathogenic Coding sequence variant, missense variant
rs137854445 G>A,C Pathogenic Coding sequence variant, missense variant
rs137854446 G>C,T Pathogenic, likely-pathogenic Coding sequence variant, missense variant
rs137854447 C>A,G,T Pathogenic Coding sequence variant, missense variant
Transcription factors Transcription factors information provided by TRRUST V2 database.
8
Transcription factor Regulation Reference
CEBPA Activation 19620402
CEBPA Unknown 16247445
GFI1 Unknown 18328744
LEF1 Activation 14594802;19620402
MYB Unknown 16247445
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
65
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IMP 19506020
GO:0001878 Process Response to yeast IEA
GO:0002020 Function Protease binding IPI 6980881
GO:0002438 Process Acute inflammatory response to antigenic stimulus IBA
GO:0002438 Process Acute inflammatory response to antigenic stimulus IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
130130 3309 ENSG00000197561
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P08246
Protein name Neutrophil elastase (EC 3.4.21.37) (Bone marrow serine protease) (Elastase-2) (Human leukocyte elastase) (HLE) (Medullasin) (PMN elastase)
Protein function Serine protease that modifies the functions of natural killer cells, monocytes and granulocytes. Inhibits C5a-dependent neutrophil enzyme release and chemotaxis (PubMed:15140022). Promotes cleavage of GSDMB, thereby inhibiting pyroptosis (PubMed
PDB 1B0F , 1H1B , 1HNE , 1PPF , 1PPG , 2RG3 , 2Z7F , 3Q76 , 3Q77 , 4NZL , 4WVP , 5A09 , 5A0A , 5A0B , 5A0C , 5A8X , 5A8Y , 5A8Z , 5ABW , 6E69 , 6F5M , 6SMA , 7CBK , 7WHU , 8D4Q , 8D4U , 8D7I , 8D7K , 8G24 , 8G25 , 8G26 , 8QGX , 8VK5 , 9ASS , 9ASX , 9ATK , 9ATU
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00089 Trypsin 30 242 Trypsin Domain
Tissue specificity TISSUE SPECIFICITY: Bone marrow cells. Neutrophil (PubMed:10947984). {ECO:0000269|PubMed:10947984}.
Sequence
Sequence length 267
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Neutrophil extracellular trap formation
Transcriptional misregulation in cancer
Systemic lupus erythematosus
  Degradation of the extracellular matrix
Activation of Matrix Metalloproteinases
Neutrophil degranulation
Antimicrobial peptides
Regulation of Complement cascade
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
16
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Autoinflammatory syndrome Likely pathogenic; Pathogenic rs2145144118, rs2145143911, rs137854447 RCV002264613
RCV002264621
RCV002262567
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Cyclical neutropenia Likely pathogenic; Pathogenic rs2035673569, rs2035675760, rs2145149815, rs879253882, rs2145149748, rs2145142832, rs762470485, rs1429051935, rs2145144144, rs2145149526, rs200752339, rs730880095, rs2512164486, rs2512164614, rs137854448
View all (28 more)
RCV001796439
RCV001796457
RCV001796460
RCV001796472
RCV001796473
View all (43 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Decreased total neutrophil count Likely pathogenic; Pathogenic rs2512168136, rs879253882 RCV002466859
RCV001003809
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
ELANE-related disorder Pathogenic; Likely pathogenic rs1555710005, rs1131691882, rs1599290793, rs1064793108, rs745455816 RCV003919992
RCV003391363
RCV003416669
RCV003401512
RCV003392305
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acute myeloid leukemia Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTOSOMAL DOMINANT SEVERE CONGENITAL NEUTROPENIA Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CYCLIC HEMATOPOIESIS GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CYCLIC NEUTROPENIA CTD, Disgenet, HPO, Orphanet
CTD, Disgenet, HPO, Orphanet
CTD, Disgenet, HPO, Orphanet
CTD, Disgenet, HPO, Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute lymphocytic leukemia Lymphocytic Leukemia BEFREE 29200171
★☆☆☆☆
Found in Text Mining only
Acute monocytic leukemia Monocytic Leukemia BEFREE 29200171
★☆☆☆☆
Found in Text Mining only
Acute monocytic leukemia Monocytic Leukemia HPO_DG
★☆☆☆☆
Found in Text Mining only
Acute pancreatitis Pancreatitis BEFREE 29511434, 30455353, 30690339
★☆☆☆☆
Found in Text Mining only
Acute Promyelocytic Leukemia Promyelocytic Leukemia BEFREE 14636558, 20647568, 26081156, 27499693, 27840989, 28849126
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma BEFREE 28814946, 29782949
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Of Esophagus Esophageal Cancer BEFREE 31509954
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of lung (disorder) Lung adenocarcinoma BEFREE 22507634
★☆☆☆☆
Found in Text Mining only
Adenoma Adenoma BEFREE 27065323
★☆☆☆☆
Found in Text Mining only
Adrenoleukodystrophy Adrenoleukodystrophy BEFREE 21438592, 29020055
★☆☆☆☆
Found in Text Mining only