Gene Gene information from NCBI Gene database.
Entrez ID 1917
Gene name Eukaryotic translation elongation factor 1 alpha 2
Gene symbol EEF1A2
Synonyms (NCBI Gene)
DEE33EEF1ALEF-1-alpha-2EF1AEIEE33HS1MRD38STNSTNL
Chromosome 20
Chromosome location 20q13.33
Summary This gene encodes an isoform of the alpha subunit of the elongation factor-1 complex, which is responsible for the enzymatic delivery of aminoacyl tRNAs to the ribosome. This isoform (alpha 2) is expressed in brain, heart and skeletal muscle, and the othe
SNPs SNP information provided by dbSNP.
17
SNP ID Visualize variation Clinical significance Consequence
rs587777162 C>T Pathogenic Coding sequence variant, missense variant
rs757556226 G>A Likely-pathogenic Coding sequence variant, missense variant
rs786205865 C>G Not-provided, pathogenic Missense variant, coding sequence variant
rs879255373 TTCTGCGCC>-,TTCTGCGCCTTCTGCGCC Likely-pathogenic, uncertain-significance Coding sequence variant, inframe insertion, inframe deletion
rs886039346 G>A Likely-pathogenic, uncertain-significance, pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
100
miRTarBase ID miRNA Experiments Reference
MIRT020876 hsa-miR-155-5p Proteomics 18668040
MIRT024775 hsa-miR-215-5p Microarray 19074876
MIRT026692 hsa-miR-192-5p Microarray 19074876
MIRT043720 hsa-miR-342-3p CLASH 23622248
MIRT054492 hsa-miR-663a Luciferase reporter assayWestern blotqRT-PCR 23695020
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
32
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0003746 Function Translation elongation factor activity IBA
GO:0003746 Function Translation elongation factor activity IEA
GO:0003746 Function Translation elongation factor activity ISS
GO:0003924 Function GTPase activity IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
602959 3192 ENSG00000101210
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q05639
Protein name Elongation factor 1-alpha 2 (EF-1-alpha-2) (EC 3.6.5.-) (Eukaryotic elongation factor 1 A-2) (eEF1A-2) (Statin-S1)
Protein function Translation elongation factor that catalyzes the GTP-dependent binding of aminoacyl-tRNA (aa-tRNA) to the A-site of ribosomes during the elongation phase of protein synthesis. Base pairing between the mRNA codon and the aa-tRNA anticodon promote
PDB 3C5J , 8B6Z
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00009 GTP_EFTU 5 238 Elongation factor Tu GTP binding domain Domain
PF03144 GTP_EFTU_D2 260 327 Elongation factor Tu domain 2 Domain
PF03143 GTP_EFTU_D3 333 442 Elongation factor Tu C-terminal domain Domain
Tissue specificity TISSUE SPECIFICITY: Brain, heart, and skeletal muscle.
Sequence
Sequence length 463
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG 
  Nucleocytoplasmic transport
Legionellosis
Leishmaniasis
 
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
33
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Complex neurodevelopmental disorder Pathogenic rs587777162 RCV006249589
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Developmental and epileptic encephalopathy, 33 Pathogenic; Likely pathogenic rs2082414178, rs587777162, rs2145946848, rs2145938177, rs2516786992, rs786205866, rs2516783448, rs2516773213, rs886039346, rs886042041, rs886041197, rs1057521655, rs1555883505, rs1555883384, rs1555883869
View all (5 more)
RCV001318268
RCV000087144
RCV002005428
RCV001975239
RCV002466321
View all (15 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
EEF1A2-related developmental and degenerative epileptic-dyskinetic encephalopathy Pathogenic; Likely pathogenic rs587777162, rs786205866, rs886041197, rs1555883505, rs1555883384, rs2082362479, rs1359844902 RCV001030061
RCV001030064
RCV001030062
RCV001030066
RCV001030067
View all (2 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
EEF1A2-related disorder Pathogenic; Likely pathogenic rs587777162, rs786205865, rs1555883505, rs1600908420 RCV003894943
RCV003397436
RCV004527627
RCV004545821
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Autism Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTISM SPECTRUM DISORDER GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTISTIC DISORDER Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Autosomal dominant epilepsy Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Ablepharon Ablepharon BEFREE 28493348
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma LHGDN 16369491
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of lung (disorder) Lung adenocarcinoma BEFREE 16369491
★☆☆☆☆
Found in Text Mining only
Akinesia Akinesia BEFREE 30616868
★☆☆☆☆
Found in Text Mining only
Anxiety Anxiety Disorder BEFREE 28528805
★☆☆☆☆
Found in Text Mining only
Anxiety Disorders Anxiety Disorder BEFREE 28528805
★☆☆☆☆
Found in Text Mining only
Arthritis Rheumatoid Rheumatoid arthritis Pubtator 18952640 Associate
★☆☆☆☆
Found in Text Mining only
Attention deficit hyperactivity disorder Attention Deficit Hyperactivity Disorder HPO_DG
★☆☆☆☆
Found in Text Mining only
Autism Spectrum Disorders Autism Spectrum Disorder BEFREE 31477274
★☆☆☆☆
Found in Text Mining only
Autistic Disorder Autism HPO_DG
★★☆☆☆
Found in Text Mining + Unknown/Other Associations