Gene Gene information from NCBI Gene database.
Entrez ID 1901
Gene name Sphingosine-1-phosphate receptor 1
Gene symbol S1PR1
Synonyms (NCBI Gene)
CD363CHEDG1D1S3362ECGF1EDG-1EDG1S1P1
Chromosome 1
Chromosome location 1p21.2
Summary The protein encoded by this gene is structurally similar to G protein-coupled receptors and is highly expressed in endothelial cells. It binds the ligand sphingosine-1-phosphate with high affinity and high specificity, and suggested to be involved in the
miRNA miRNA information provided by mirtarbase database.
251
miRTarBase ID miRNA Experiments Reference
MIRT438751 hsa-miR-148a-3p Hep3B 24798342
MIRT396670 hsa-miR-363-3p Luciferase reporter assayqRT-PCRWestern blot 24631531
MIRT396655 hsa-miR-125b-1-3p Luciferase reporter assayWestern blotqRT-PCR 25251470
MIRT396655 hsa-miR-125b-1-3p Luciferase reporter assayWestern blotqRT-PCR 25251470
MIRT438751 hsa-miR-148a-3p Hep3B 24798342
Transcription factors Transcription factors information provided by TRRUST V2 database.
1
Transcription factor Regulation Reference
STAT3 Activation 21102457
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
68
GO ID Ontology Definition Evidence Reference
GO:0001525 Process Angiogenesis IBA
GO:0001525 Process Angiogenesis IEA
GO:0001525 Process Angiogenesis IEA
GO:0001664 Function G protein-coupled receptor binding IPI 24851274
GO:0001955 Process Blood vessel maturation IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
601974 3165 ENSG00000170989
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P21453
Protein name Sphingosine 1-phosphate receptor 1 (S1P receptor 1) (S1P1) (Endothelial differentiation G-protein coupled receptor 1) (Sphingosine 1-phosphate receptor Edg-1) (S1P receptor Edg-1) (CD antigen CD363)
Protein function G-protein coupled receptor for the bioactive lysosphingolipid sphingosine 1-phosphate (S1P) that seems to be coupled to the G(i) subclass of heteromeric G proteins. Signaling leads to the activation of RAC1, SRC, PTK2/FAK1 and MAP kinases. Plays
PDB 3V2W , 3V2Y , 7EO2 , 7EO4 , 7EVY , 7EVZ , 7EW0 , 7EW7 , 7TD3 , 7TD4 , 7VIE , 7VIF , 7VIG , 7VIH , 7WF7 , 8G94 , 8YIC
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00001 7tm_1 62 311 7 transmembrane receptor (rhodopsin family) Family
Tissue specificity TISSUE SPECIFICITY: Endothelial cells, and to a lesser extent, in vascular smooth muscle cells, fibroblasts, melanocytes, and cells of epithelioid origin.
Sequence
Sequence length 382
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  FoxO signaling pathway
Sphingolipid signaling pathway
Neuroactive ligand-receptor interaction
Efferocytosis
  G alpha (i) signalling events
Lysosphingolipid and LPA receptors
Interleukin-4 and Interleukin-13 signaling
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
5
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
BIPOLAR DISORDER Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CARCINOMA CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
HYPOTHYROIDISM GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
LIVER CIRRHOSIS, EXPERIMENTAL CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adenocarcinoma Of Esophagus Esophageal Cancer BEFREE 15788668
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of lung (disorder) Lung adenocarcinoma BEFREE 23111975, 31558162
★☆☆☆☆
Found in Text Mining only
Adult Diffuse Large B-Cell Lymphoma B-cell Lymphoma BEFREE 27061580
★☆☆☆☆
Found in Text Mining only
Alzheimer Disease Alzheimer disease Pubtator 33788842 Associate
★☆☆☆☆
Found in Text Mining only
Anaplastic carcinoma Anaplastic Carcinoma CTD_human_DG 12376462
★☆☆☆☆
Found in Text Mining only
Anemia Anemia BEFREE 29551975
★☆☆☆☆
Found in Text Mining only
Anemia Aplastic Aplastic anemia Pubtator 30889317 Associate
★☆☆☆☆
Found in Text Mining only
Anemia, Sickle Cell Anemia BEFREE 29401601
★☆☆☆☆
Found in Text Mining only
Arteriosclerosis Arteriosclerosis BEFREE 26268607, 29134505, 29244772, 30627532
★☆☆☆☆
Found in Text Mining only
Arthritis Arthritis BEFREE 22131329, 22992945, 31607926
★☆☆☆☆
Found in Text Mining only