Gene Gene information from NCBI Gene database.
Entrez ID 190
Gene name Nuclear receptor subfamily 0 group B member 1
Gene symbol NR0B1
Synonyms (NCBI Gene)
AHCAHCHAHXDAX-1DAX1DSSGTDHHGNROB1SRXY2
Chromosome X
Chromosome location Xp21.2
Summary This gene encodes a protein that contains a DNA-binding domain. The encoded protein acts as a dominant-negative regulator of transcription which is mediated by the retinoic acid receptor. This protein also functions as an anti-testis gene by acting antago
SNPs SNP information provided by dbSNP.
68
SNP ID Visualize variation Clinical significance Consequence
rs28935481 T>A,C Pathogenic Coding sequence variant, missense variant
rs28935482 C>G Pathogenic Coding sequence variant, missense variant
rs104894886 C>T Pathogenic Coding sequence variant, stop gained
rs104894887 A>T Pathogenic Coding sequence variant, stop gained
rs104894888 C>G,T Pathogenic Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
1
miRTarBase ID miRNA Experiments Reference
MIRT437448 hsa-miR-561-3p Luciferase reporter assay 24104199
Transcription factors Transcription factors information provided by TRRUST V2 database.
5
Transcription factor Regulation Reference
ESRRG Activation 16314306
EWSR1 Unknown 18591936
NR5A1 Activation 11990799
NR5A1 Unknown 7677767
SF1 Unknown 11923472;9232190
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
59
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IBA
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IEA
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IMP 19651776
GO:0000785 Component Chromatin ISA
GO:0003006 Process Developmental process involved in reproduction IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
300473 7960 ENSG00000169297
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P51843
Protein name Nuclear receptor subfamily 0 group B member 1 (DSS-AHC critical region on the X chromosome protein 1) (Nuclear receptor DAX-1)
Protein function Nuclear receptor that lacks a DNA-binding domain and acts as a corepressor that inhibits the transcriptional activity of other nuclear receptors through heterodimeric interactions (PubMed:12482977, PubMed:32433991). Component of a cascade requir
PDB 4RWV
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF14046 NR_Repeat 1 49 Nuclear receptor repeat Family
PF14046 NR_Repeat 68 115 Nuclear receptor repeat Family
PF14046 NR_Repeat 134 181 Nuclear receptor repeat Family
PF14046 NR_Repeat 201 246 Nuclear receptor repeat Family
PF00104 Hormone_recep 249 453 Ligand-binding domain of nuclear hormone receptor Domain
Sequence
Sequence length 470
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Cortisol synthesis and secretion   Nuclear Receptor transcription pathway
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
12
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
46,XY sex reversal 2 Pathogenic; Likely pathogenic rs2147007353, rs2147006209, rs2519049362, rs2519051075, rs2519051933, rs2519049357, rs1214621343, rs2519051723, rs2519051970, rs104894888, rs1569268070, rs1569268976, rs2519051360, rs1191878631, rs2519051604
View all (15 more)
RCV001389323
RCV001899630
RCV003064681
RCV003064682
RCV003041429
View all (25 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Congenital adrenal hypoplasia, X-linked Pathogenic; Likely pathogenic rs2147007353, rs2147007424, rs2147006209, rs2147007005, rs764476639, rs2519052221, rs2519052283, rs2519049304, rs2519049362, rs2519051075, rs2519051933, rs2519049357, rs1214621343, rs2519051723, rs2519051970
View all (75 more)
RCV001389323
RCV002280832
RCV001899630
RCV002052278
RCV002286488
View all (88 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Differences in sex development Likely pathogenic; Pathogenic rs2519049376 RCV005865640
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Nonpapillary renal cell carcinoma Pathogenic rs2147007353 RCV005912656
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
DOSAGE-SENSITIVE SEX REVERSAL CTD, Disgenet
CTD, Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
HYPOGONADISM CTD, Disgenet
CTD, Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Mineralocorticoid deficiency, isolated Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
SWYER SYNDROME Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
46, XX Testicular Disorders of Sex Development 46, XX Gonadal Sex Reversal BEFREE 24149105
★☆☆☆☆
Found in Text Mining only
46, XX Testicular Disorders of Sex Development 46, XX Gonadal Sex Reversal ORPHANET_DG 28483799
★☆☆☆☆
Found in Text Mining only
46,XX testicular disorder of sex development 46, XX Gonadal Sex Reversal Orphanet
★☆☆☆☆
Found in Text Mining only
46,XY complete gonadal dysgenesis 46, XY complete gonadal dysgenesis Orphanet
★☆☆☆☆
Found in Text Mining only
46,XY partial gonadal dysgenesis 46, XY partial gonadal dysgenesis ORPHANET_DG 18384427
★☆☆☆☆
Found in Text Mining only
46,XY partial gonadal dysgenesis 46, XY partial gonadal dysgenesis Orphanet
★☆☆☆☆
Found in Text Mining only
Achondroplasia Achondroplasia Pubtator 25731006 Associate
★☆☆☆☆
Found in Text Mining only
ACTH-Secreting Pituitary Adenoma Pituitary adenoma BEFREE 16061826
★☆☆☆☆
Found in Text Mining only
Addison Disease Addison`s Disease BEFREE 10022408, 12559852, 15841486, 16355812, 18604556, 22768659, 23384712, 25968435, 26448365, 26464492, 28075027, 29087957, 29176027, 30806790, 31610036
View all (1 more)
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma BEFREE 18034892
★☆☆☆☆
Found in Text Mining only