Gene Gene information from NCBI Gene database.
Entrez ID 170692
Gene name ADAM metallopeptidase with thrombospondin type 1 motif 18
Gene symbol ADAMTS18
Synonyms (NCBI Gene)
ADAMTS21KNO2MMCAT
Chromosome 16
Chromosome location 16q23.1
Summary This gene encodes a member of the ADAMTS (a disintegrin and metalloproteinase with thrombospondin motifs) protein family. ADAMTS family members share several distinct protein modules, including a propeptide region, a metalloproteinase domain, a disintegri
SNPs SNP information provided by dbSNP.
4
SNP ID Visualize variation Clinical significance Consequence
rs148319220 G>A,C Pathogenic Coding sequence variant, missense variant, synonymous variant
rs397515467 C>A,T Pathogenic Missense variant, coding sequence variant, stop gained
rs397515468 A>G Pathogenic Missense variant, 5 prime UTR variant, coding sequence variant
rs397515469 G>A Pathogenic 5 prime UTR variant, coding sequence variant, genic upstream transcript variant, stop gained
miRNA miRNA information provided by mirtarbase database.
82
miRTarBase ID miRNA Experiments Reference
MIRT648906 hsa-miR-3662 HITS-CLIP 23824327
MIRT648905 hsa-miR-3163 HITS-CLIP 23824327
MIRT648904 hsa-miR-645 HITS-CLIP 23824327
MIRT648903 hsa-miR-517-5p HITS-CLIP 23824327
MIRT648902 hsa-miR-1251-5p HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
16
GO ID Ontology Definition Evidence Reference
GO:0001654 Process Eye development IMP 23818446
GO:0004222 Function Metalloendopeptidase activity IBA
GO:0004222 Function Metalloendopeptidase activity IEA
GO:0005576 Component Extracellular region IEA
GO:0006508 Process Proteolysis IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
607512 17110 ENSG00000140873
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q8TE60
Protein name A disintegrin and metalloproteinase with thrombospondin motifs 18 (ADAM-TS 18) (ADAM-TS18) (ADAMTS-18) (EC 3.4.24.-)
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01562 Pep_M12B_propep 62 203 Reprolysin family propeptide Family
PF01421 Reprolysin 294 498 Reprolysin (M12B) family zinc metalloprotease Domain
PF17771 ADAM_CR_2 511 578 ADAM cysteine-rich domain Domain
PF00090 TSP_1 593 643 Thrombospondin type 1 domain Domain
PF05986 ADAM_spacer1 749 861 ADAM-TS Spacer 1 Family
PF19030 TSP1_ADAMTS 935 991 Domain
PF19030 TSP1_ADAMTS 995 1048 Domain
PF19030 TSP1_ADAMTS 1056 1115 Domain
PF19030 TSP1_ADAMTS 1127 1177 Domain
PF08686 PLAC 1188 1218 PLAC (protease and lacunin) domain Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in fetal lung, liver, and kidney and in adult brain, prostate, submaxillary gland, and endothelium.
Sequence
MECALLLACAFPAAGSGPPRGLAGLGRVAKALQLCCLCCASVAAALASDSSSGASGLNDD
YVFVTPVEVDSAGSYISHDILHNGRKKRSAQNARSSLHYRFSAFGQELHLELKPSAILSS
HFIVQVLGKDGASETQKPEVQQCFYQGFIRNDSSSSVAVSTCAGLSGLIRTRKNEFLISP
LPQLLAQEHNYSSPAGHHPHVLY
KRTAEEKIQRYRGYPGSGRNYPGYSPSHIPHASQSRE
TEYHHRRLQKQHFCGRRKKYAPKPPTEDTYLRFDEYGSSGRPRRSAGKSQKGLNVETLVV
ADKKMVEKHGKGNVTTYILTVMNMVSGLFKDGTIGSDINVVVVSLILLEQEPGGLLINHH
ADQSLNSFCQWQSALIGKNGKRHDHAILLTGFDICSWKNEPCDTLGFAPISGMCSKYRSC
TINEDTGLGLAFTIAHESGHNFGMIHDGEGNPCRKAEGNIMSPTLTGNNGVFSWSSCSRQ
YLKKFLSTPQAGCLVDEP
KQAGQYKYPDKLPGQIYDADTQCKWQFGAKAKLCSLGFVKDI
CKSLWCHRVGHRCETKFMPAAEGTVCGLSMWCRQGQCV
KFGELGPRPIHGQWSAWSKWSE
CSRTCGGGVKFQERHCNNPKPQYGGLFCPGSSRIYQLCNINPC
NENSLDFRAQQCAEYNS
KPFRGWFYQWKPYTKVEEEDRCKLYCKAENFEFFFAMSGKVKDGTPCSPNKNDVCIDGVC
ELVGCDHELGSKAVSDACGVCKGDNSTCKFYKGLYLNQHKANEYYPVVLIPAGARSIEIQ
ELQVSSSYLAVRSLSQKYYLTGGWSIDWPGEFPFAGTTFEYQRSFNRPERLYAPGPTNET
LVFEILMQGKNPGIAWKYALP
KVMNGTPPATKRPAYTWSIVQSECSVSCGGGYINVKAIC
LRDQNTQVNSSFCSAKTKPVTEPKICNAFSCPAYWMPGEWSTCSKACAGGQQSRKIQCVQ
KKPFQKEEAVLHSLCPVSTPTQVQACNSHAC
PPQWSLGPWSQCSKTCGRGVRKRELLCKG
SAAETLPESQCTSLPRPELQEGCVLGRC
PKNSRLQWVASSWSECSATCGLGVRKREMKCS
EKGFQGKLITFPERRCRNIKKPNLDLEETCNRRAC
PAHPVYNMVAGWYSLPWQQCTVTCG
GGVQTRSVHCVQQGRPSSSCLLHQKPPVLRACNTNFC
PAPEKREDPSCVDFFNWCHLVPQ
HGVCNHKFYGKQCCKSCT
RKI
Sequence length 1221
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Defective B3GALTL causes Peters-plus syndrome (PpS)
O-glycosylation of TSR domain-containing proteins
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
29
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
ADAMTS18-related disorder Likely pathogenic; Pathogenic rs935159456, rs777218145 RCV003407874
RCV003402406
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Familial cancer of breast Likely pathogenic rs201570714 RCV005922459
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Microcornea-myopic chorioretinal atrophy Likely pathogenic; Pathogenic rs139516327, rs776870884, rs1011453043, rs397515467, rs397515468, rs397515469 RCV001785815
RCV003223421
RCV005439042
RCV000056279
RCV000056280
View all (1 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Retinal disorder Likely pathogenic; Pathogenic rs139516327 RCV006270241
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ALZHEIMER DISEASE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ANDROGENETIC ALOPECIA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTISM SPECTRUM DISORDER CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTISM SPECTRUM DISORDERS Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Arteriosclerosis Arteriosclerosis BEFREE 29169989
★☆☆☆☆
Found in Text Mining only
Atherosclerosis Atherosclerosis BEFREE 29169989
★☆☆☆☆
Found in Text Mining only
Breast Carcinoma Breast Carcinoma BEFREE 28503860
★☆☆☆☆
Found in Text Mining only
Carcinoma Carcinoma BEFREE 17546048, 28503860
★☆☆☆☆
Found in Text Mining only
Carcinoma of lung Lung carcinoma BEFREE 30417422
★☆☆☆☆
Found in Text Mining only
Carcinoma Renal Cell Renal cell carcinoma Pubtator 25569086, 40649942 Associate
★☆☆☆☆
Found in Text Mining only
Cardiomyopathy, Familial Idiopathic Cardiomyopathy BEFREE 29860265
★☆☆☆☆
Found in Text Mining only
Carotid Artery Thrombosis Carotid Artery Thrombosis BEFREE 29421655
★☆☆☆☆
Found in Text Mining only
Cerebral Infarction Cerebral Infarction BEFREE 29421655
★☆☆☆☆
Found in Text Mining only
cervical cancer Cervical Cancer BEFREE 28362704
★★☆☆☆
Found in Text Mining + Unknown/Other Associations