DDB1 (damage specific DNA binding protein 1)

Gene

• Entrez ID: 1642
• Gene name: Damage specific DNA binding protein 1
• Gene symbol: DDB1
• Synonyms (NCBI Gene): DDBA, UV-DDB1, WHIKERS, XAP1, XPCE, XPE, XPE-BF
• Chromosome: 11
• Chromosome location: 11q12.2
• Summary: The protein encoded by this gene is the large subunit (p127) of the heterodimeric DNA damage-binding (DDB) complex while another protein (p48) forms the small subunit. This protein complex functions in nucleotide-excision repair and binds to DNA following

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT016411	hsa-miR-193b-3p	Proteomics	21512034
MIRT050184	hsa-miR-26a-5p	CLASH	23622248
MIRT047942	hsa-miR-30c-5p	CLASH	23622248
MIRT045485	hsa-miR-149-5p	CLASH	23622248
MIRT045270	hsa-miR-186-5p	CLASH	23622248
MIRT036583	hsa-miR-941	CLASH	23622248
MIRT052820	hsa-miR-3200-3p	CLASH	23622248
MIRT611538	hsa-miR-8485	HITS-CLIP	23824327
MIRT611537	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT611536	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT611535	hsa-miR-603	HITS-CLIP	23824327
MIRT611534	hsa-miR-4789-3p	HITS-CLIP	23824327
MIRT611533	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT611532	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT611531	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT611530	hsa-miR-3941	HITS-CLIP	23824327
MIRT611538	hsa-miR-8485	HITS-CLIP	23824327
MIRT611533	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT611532	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT611531	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT611538	hsa-miR-8485	HITS-CLIP	23824327
MIRT611537	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT611536	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT611535	hsa-miR-603	HITS-CLIP	23824327
MIRT611534	hsa-miR-4789-3p	HITS-CLIP	23824327
MIRT611530	hsa-miR-3941	HITS-CLIP	23824327
MIRT611538	hsa-miR-8485	HITS-CLIP	23824327
MIRT611537	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT611536	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT611535	hsa-miR-603	HITS-CLIP	23824327
MIRT611533	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT611532	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT611531	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT611530	hsa-miR-3941	HITS-CLIP	23824327
MIRT611538	hsa-miR-8485	HITS-CLIP	23824327
MIRT611537	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT611536	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT611535	hsa-miR-603	HITS-CLIP	23824327
MIRT611533	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT611532	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT611531	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT611530	hsa-miR-3941	HITS-CLIP	23824327
MIRT611538	hsa-miR-8485	HITS-CLIP	23824327
MIRT611533	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT611532	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT611531	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT611538	hsa-miR-8485	HITS-CLIP	23824327
MIRT611537	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT611536	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT611535	hsa-miR-603	HITS-CLIP	23824327
MIRT611533	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT611532	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT611531	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT611530	hsa-miR-3941	HITS-CLIP	23824327
MIRT611538	hsa-miR-8485	HITS-CLIP	23824327
MIRT611537	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT611536	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT611535	hsa-miR-603	HITS-CLIP	23824327
MIRT611533	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT611532	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT611531	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT611530	hsa-miR-3941	HITS-CLIP	23824327
MIRT611538	hsa-miR-8485	HITS-CLIP	23824327
MIRT611537	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT611536	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT611535	hsa-miR-603	HITS-CLIP	23824327
MIRT611534	hsa-miR-4789-3p	HITS-CLIP	23824327
MIRT611533	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT611532	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT611531	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT611530	hsa-miR-3941	HITS-CLIP	23824327
MIRT490005	hsa-miR-548n	PAR-CLIP	23592263
MIRT490004	hsa-miR-548a-5p	PAR-CLIP	23592263
MIRT490003	hsa-miR-548ab	PAR-CLIP	23592263
MIRT490002	hsa-miR-548ad-5p	PAR-CLIP	23592263
MIRT490001	hsa-miR-548ae-5p	PAR-CLIP	23592263
MIRT490000	hsa-miR-548ak	PAR-CLIP	23592263
MIRT489999	hsa-miR-548am-5p	PAR-CLIP	23592263
MIRT489998	hsa-miR-548ap-5p	PAR-CLIP	23592263
MIRT489997	hsa-miR-548aq-5p	PAR-CLIP	23592263
MIRT489996	hsa-miR-548ar-5p	PAR-CLIP	23592263
MIRT489995	hsa-miR-548as-5p	PAR-CLIP	23592263
MIRT489994	hsa-miR-548au-5p	PAR-CLIP	23592263
MIRT489993	hsa-miR-548ay-5p	PAR-CLIP	23592263
MIRT489992	hsa-miR-548b-5p	PAR-CLIP	23592263
MIRT489991	hsa-miR-548bb-5p	PAR-CLIP	23592263
MIRT489990	hsa-miR-548c-5p	PAR-CLIP	23592263
MIRT489989	hsa-miR-548d-5p	PAR-CLIP	23592263
MIRT489988	hsa-miR-548h-5p	PAR-CLIP	23592263
MIRT489987	hsa-miR-548i	PAR-CLIP	23592263
MIRT489986	hsa-miR-548j-5p	PAR-CLIP	23592263
MIRT489985	hsa-miR-548o-5p	PAR-CLIP	23592263
MIRT489984	hsa-miR-548w	PAR-CLIP	23592263
MIRT489983	hsa-miR-548y	PAR-CLIP	23592263
MIRT489982	hsa-miR-559	PAR-CLIP	23592263
MIRT489980	hsa-miR-5197-3p	PAR-CLIP	23592263
MIRT489981	hsa-miR-4476	PAR-CLIP	23592263
MIRT489979	hsa-miR-6876-5p	PAR-CLIP	23592263
MIRT489978	hsa-miR-6847-5p	PAR-CLIP	23592263
MIRT489977	hsa-miR-4257	PAR-CLIP	23592263
MIRT489976	hsa-miR-1304-3p	PAR-CLIP	23592263
MIRT489975	hsa-miR-4330	PAR-CLIP	23592263
MIRT489974	hsa-miR-493-3p	PAR-CLIP	23592263
MIRT611538	hsa-miR-8485	HITS-CLIP	23824327
MIRT611537	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT611536	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT611535	hsa-miR-603	HITS-CLIP	23824327
MIRT611534	hsa-miR-4789-3p	HITS-CLIP	23824327
MIRT611533	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT611532	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT611531	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT611530	hsa-miR-3941	HITS-CLIP	23824327
MIRT611538	hsa-miR-8485	HITS-CLIP	23824327
MIRT611533	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT611532	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT611531	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT611538	hsa-miR-8485	HITS-CLIP	23824327
MIRT611537	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT611536	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT611535	hsa-miR-603	HITS-CLIP	23824327
MIRT611534	hsa-miR-4789-3p	HITS-CLIP	23824327
MIRT611530	hsa-miR-3941	HITS-CLIP	23824327
MIRT611538	hsa-miR-8485	HITS-CLIP	23824327
MIRT611537	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT611536	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT611535	hsa-miR-603	HITS-CLIP	23824327
MIRT611533	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT611532	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT611531	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT611530	hsa-miR-3941	HITS-CLIP	23824327
MIRT611538	hsa-miR-8485	HITS-CLIP	23824327
MIRT611537	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT611536	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT611535	hsa-miR-603	HITS-CLIP	23824327
MIRT611533	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT611532	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT611531	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT611530	hsa-miR-3941	HITS-CLIP	23824327
MIRT611538	hsa-miR-8485	HITS-CLIP	23824327
MIRT611533	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT611532	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT611531	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT611538	hsa-miR-8485	HITS-CLIP	23824327
MIRT611537	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT611536	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT611535	hsa-miR-603	HITS-CLIP	23824327
MIRT611533	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT611532	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT611531	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT611530	hsa-miR-3941	HITS-CLIP	23824327
MIRT611538	hsa-miR-8485	HITS-CLIP	23824327
MIRT611537	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT611536	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT611535	hsa-miR-603	HITS-CLIP	23824327
MIRT611533	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT611532	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT611531	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT611530	hsa-miR-3941	HITS-CLIP	23824327
MIRT611538	hsa-miR-8485	HITS-CLIP	23824327
MIRT611537	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT611536	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT611535	hsa-miR-603	HITS-CLIP	23824327
MIRT611534	hsa-miR-4789-3p	HITS-CLIP	23824327
MIRT611533	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT611532	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT611531	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT611530	hsa-miR-3941	HITS-CLIP	23824327
MIRT490005	hsa-miR-548n	PAR-CLIP	23592263
MIRT490004	hsa-miR-548a-5p	PAR-CLIP	23592263
MIRT490003	hsa-miR-548ab	PAR-CLIP	23592263
MIRT490002	hsa-miR-548ad-5p	PAR-CLIP	23592263
MIRT490001	hsa-miR-548ae-5p	PAR-CLIP	23592263
MIRT490000	hsa-miR-548ak	PAR-CLIP	23592263
MIRT489999	hsa-miR-548am-5p	PAR-CLIP	23592263
MIRT489998	hsa-miR-548ap-5p	PAR-CLIP	23592263
MIRT489997	hsa-miR-548aq-5p	PAR-CLIP	23592263
MIRT489996	hsa-miR-548ar-5p	PAR-CLIP	23592263
MIRT489995	hsa-miR-548as-5p	PAR-CLIP	23592263
MIRT489994	hsa-miR-548au-5p	PAR-CLIP	23592263
MIRT489993	hsa-miR-548ay-5p	PAR-CLIP	23592263
MIRT489992	hsa-miR-548b-5p	PAR-CLIP	23592263
MIRT489991	hsa-miR-548bb-5p	PAR-CLIP	23592263
MIRT489990	hsa-miR-548c-5p	PAR-CLIP	23592263
MIRT489989	hsa-miR-548d-5p	PAR-CLIP	23592263
MIRT489988	hsa-miR-548h-5p	PAR-CLIP	23592263
MIRT489987	hsa-miR-548i	PAR-CLIP	23592263
MIRT489986	hsa-miR-548j-5p	PAR-CLIP	23592263
MIRT489985	hsa-miR-548o-5p	PAR-CLIP	23592263
MIRT489984	hsa-miR-548w	PAR-CLIP	23592263
MIRT489983	hsa-miR-548y	PAR-CLIP	23592263
MIRT489982	hsa-miR-559	PAR-CLIP	23592263
MIRT489980	hsa-miR-5197-3p	PAR-CLIP	23592263
MIRT489981	hsa-miR-4476	PAR-CLIP	23592263
MIRT489979	hsa-miR-6876-5p	PAR-CLIP	23592263
MIRT489978	hsa-miR-6847-5p	PAR-CLIP	23592263
MIRT489977	hsa-miR-4257	PAR-CLIP	23592263
MIRT489976	hsa-miR-1304-3p	PAR-CLIP	23592263
MIRT489975	hsa-miR-4330	PAR-CLIP	23592263
MIRT489974	hsa-miR-493-3p	PAR-CLIP	23592263
MIRT928725	hsa-miR-1224-3p	CLIP-seq
MIRT928726	hsa-miR-1248	CLIP-seq
MIRT928727	hsa-miR-1260	CLIP-seq
MIRT928728	hsa-miR-1260b	CLIP-seq
MIRT928729	hsa-miR-1280	CLIP-seq
MIRT928730	hsa-miR-185	CLIP-seq
MIRT928731	hsa-miR-18a	CLIP-seq
MIRT928732	hsa-miR-18b	CLIP-seq
MIRT928733	hsa-miR-2467-3p	CLIP-seq
MIRT928734	hsa-miR-2682	CLIP-seq
MIRT928735	hsa-miR-27a	CLIP-seq
MIRT928736	hsa-miR-27b	CLIP-seq
MIRT928737	hsa-miR-3124-3p	CLIP-seq
MIRT928738	hsa-miR-3165	CLIP-seq
MIRT928739	hsa-miR-3185	CLIP-seq
MIRT928740	hsa-miR-323-5p	CLIP-seq
MIRT928741	hsa-miR-326	CLIP-seq
MIRT928742	hsa-miR-329	CLIP-seq
MIRT928743	hsa-miR-330-5p	CLIP-seq
MIRT928744	hsa-miR-3591-3p	CLIP-seq
MIRT928745	hsa-miR-3607-5p	CLIP-seq
MIRT928746	hsa-miR-3616-3p	CLIP-seq
MIRT928747	hsa-miR-3652	CLIP-seq
MIRT928748	hsa-miR-3672	CLIP-seq
MIRT928749	hsa-miR-3678-3p	CLIP-seq
MIRT928750	hsa-miR-3692	CLIP-seq
MIRT928751	hsa-miR-3714	CLIP-seq
MIRT928752	hsa-miR-3922-5p	CLIP-seq
MIRT928753	hsa-miR-3925-3p	CLIP-seq
MIRT928754	hsa-miR-3926	CLIP-seq
MIRT928755	hsa-miR-4270	CLIP-seq
MIRT928756	hsa-miR-4306	CLIP-seq
MIRT928757	hsa-miR-4318	CLIP-seq
MIRT928758	hsa-miR-4430	CLIP-seq
MIRT928759	hsa-miR-4441	CLIP-seq
MIRT928760	hsa-miR-4446-3p	CLIP-seq
MIRT928761	hsa-miR-4463	CLIP-seq
MIRT928762	hsa-miR-4471	CLIP-seq
MIRT928763	hsa-miR-4474-3p	CLIP-seq
MIRT928764	hsa-miR-4488	CLIP-seq
MIRT928765	hsa-miR-4490	CLIP-seq
MIRT928766	hsa-miR-449c	CLIP-seq
MIRT928767	hsa-miR-4505	CLIP-seq
MIRT928768	hsa-miR-4521	CLIP-seq
MIRT928769	hsa-miR-4644	CLIP-seq
MIRT928770	hsa-miR-4659a-3p	CLIP-seq
MIRT928771	hsa-miR-4659b-3p	CLIP-seq
MIRT928772	hsa-miR-4667-5p	CLIP-seq
MIRT928773	hsa-miR-4668-3p	CLIP-seq
MIRT928774	hsa-miR-4671-5p	CLIP-seq
MIRT928775	hsa-miR-4675	CLIP-seq
MIRT928776	hsa-miR-4685-5p	CLIP-seq
MIRT928777	hsa-miR-4697-5p	CLIP-seq
MIRT928778	hsa-miR-4700-5p	CLIP-seq
MIRT928779	hsa-miR-4716-3p	CLIP-seq
MIRT928780	hsa-miR-4723-5p	CLIP-seq
MIRT928781	hsa-miR-4728-5p	CLIP-seq
MIRT928782	hsa-miR-4735-3p	CLIP-seq
MIRT928783	hsa-miR-4741	CLIP-seq
MIRT928784	hsa-miR-4778-3p	CLIP-seq
MIRT928785	hsa-miR-4779	CLIP-seq
MIRT928786	hsa-miR-486-3p	CLIP-seq
MIRT928787	hsa-miR-493	CLIP-seq
MIRT928788	hsa-miR-513a-5p	CLIP-seq
MIRT928789	hsa-miR-532-3p	CLIP-seq
MIRT928790	hsa-miR-548c-3p	CLIP-seq
MIRT928791	hsa-miR-548h	CLIP-seq
MIRT928792	hsa-miR-548j	CLIP-seq
MIRT928793	hsa-miR-548s	CLIP-seq
MIRT928794	hsa-miR-601	CLIP-seq
MIRT928795	hsa-miR-637	CLIP-seq
MIRT928796	hsa-miR-660	CLIP-seq
MIRT928797	hsa-miR-760	CLIP-seq
MIRT928798	hsa-miR-766	CLIP-seq
MIRT928799	hsa-miR-876-3p	CLIP-seq
MIRT1975057	hsa-miR-1207-3p	CLIP-seq
MIRT1975058	hsa-miR-3153	CLIP-seq
MIRT1975059	hsa-miR-3162-5p	CLIP-seq
MIRT928741	hsa-miR-326	CLIP-seq
MIRT928742	hsa-miR-329	CLIP-seq
MIRT928743	hsa-miR-330-5p	CLIP-seq
MIRT928757	hsa-miR-4318	CLIP-seq
MIRT928762	hsa-miR-4471	CLIP-seq
MIRT928763	hsa-miR-4474-3p	CLIP-seq
MIRT928764	hsa-miR-4488	CLIP-seq
MIRT928772	hsa-miR-4667-5p	CLIP-seq
MIRT928777	hsa-miR-4697-5p	CLIP-seq
MIRT928778	hsa-miR-4700-5p	CLIP-seq
MIRT928786	hsa-miR-486-3p	CLIP-seq
MIRT928795	hsa-miR-637	CLIP-seq
MIRT928797	hsa-miR-760	CLIP-seq
MIRT928731	hsa-miR-18a	CLIP-seq
MIRT928732	hsa-miR-18b	CLIP-seq
MIRT2210457	hsa-miR-23a	CLIP-seq
MIRT2210458	hsa-miR-23b	CLIP-seq
MIRT2210459	hsa-miR-23c	CLIP-seq
MIRT2210460	hsa-miR-3128	CLIP-seq
MIRT2210461	hsa-miR-3133	CLIP-seq
MIRT2210462	hsa-miR-3157-5p	CLIP-seq
MIRT2210463	hsa-miR-3173-3p	CLIP-seq
MIRT928740	hsa-miR-323-5p	CLIP-seq
MIRT928742	hsa-miR-329	CLIP-seq
MIRT928744	hsa-miR-3591-3p	CLIP-seq
MIRT928745	hsa-miR-3607-5p	CLIP-seq
MIRT928747	hsa-miR-3652	CLIP-seq
MIRT2210464	hsa-miR-3667-3p	CLIP-seq
MIRT928750	hsa-miR-3692	CLIP-seq
MIRT928752	hsa-miR-3922-5p	CLIP-seq
MIRT928753	hsa-miR-3925-3p	CLIP-seq
MIRT928755	hsa-miR-4270	CLIP-seq
MIRT2210465	hsa-miR-4286	CLIP-seq
MIRT928758	hsa-miR-4430	CLIP-seq
MIRT928759	hsa-miR-4441	CLIP-seq
MIRT928767	hsa-miR-4505	CLIP-seq
MIRT2210466	hsa-miR-4511	CLIP-seq
MIRT928768	hsa-miR-4521	CLIP-seq
MIRT2210467	hsa-miR-4533	CLIP-seq
MIRT928773	hsa-miR-4668-3p	CLIP-seq
MIRT928776	hsa-miR-4685-5p	CLIP-seq
MIRT2210468	hsa-miR-4691-3p	CLIP-seq
MIRT2210469	hsa-miR-4707-3p	CLIP-seq
MIRT2210470	hsa-miR-4707-5p	CLIP-seq
MIRT928782	hsa-miR-4735-3p	CLIP-seq
MIRT2210471	hsa-miR-4758-3p	CLIP-seq
MIRT2210472	hsa-miR-4786-3p	CLIP-seq
MIRT2210473	hsa-miR-500a	CLIP-seq
MIRT2210474	hsa-miR-5096	CLIP-seq
MIRT928790	hsa-miR-548c-3p	CLIP-seq
MIRT2210475	hsa-miR-549	CLIP-seq
MIRT928794	hsa-miR-601	CLIP-seq
MIRT928796	hsa-miR-660	CLIP-seq
MIRT928798	hsa-miR-766	CLIP-seq
MIRT928799	hsa-miR-876-3p	CLIP-seq
MIRT928742	hsa-miR-329	CLIP-seq
MIRT1975057	hsa-miR-1207-3p	CLIP-seq
MIRT928725	hsa-miR-1224-3p	CLIP-seq
MIRT2514434	hsa-miR-1236	CLIP-seq
MIRT928726	hsa-miR-1248	CLIP-seq
MIRT928727	hsa-miR-1260	CLIP-seq
MIRT928728	hsa-miR-1260b	CLIP-seq
MIRT928729	hsa-miR-1280	CLIP-seq
MIRT928730	hsa-miR-185	CLIP-seq
MIRT928731	hsa-miR-18a	CLIP-seq
MIRT928732	hsa-miR-18b	CLIP-seq
MIRT2514435	hsa-miR-2110	CLIP-seq
MIRT2514436	hsa-miR-214	CLIP-seq
MIRT2514437	hsa-miR-2355-5p	CLIP-seq
MIRT2210457	hsa-miR-23a	CLIP-seq
MIRT2210458	hsa-miR-23b	CLIP-seq
MIRT2210459	hsa-miR-23c	CLIP-seq
MIRT928733	hsa-miR-2467-3p	CLIP-seq
MIRT928734	hsa-miR-2682	CLIP-seq
MIRT2514438	hsa-miR-296-5p	CLIP-seq
MIRT928737	hsa-miR-3124-3p	CLIP-seq
MIRT2210460	hsa-miR-3128	CLIP-seq
MIRT2210461	hsa-miR-3133	CLIP-seq
MIRT2514439	hsa-miR-3150a-3p	CLIP-seq
MIRT1975058	hsa-miR-3153	CLIP-seq
MIRT2210462	hsa-miR-3157-5p	CLIP-seq
MIRT2514440	hsa-miR-3162-3p	CLIP-seq
MIRT1975059	hsa-miR-3162-5p	CLIP-seq
MIRT928738	hsa-miR-3165	CLIP-seq
MIRT2210463	hsa-miR-3173-3p	CLIP-seq
MIRT2514441	hsa-miR-3175	CLIP-seq
MIRT928739	hsa-miR-3185	CLIP-seq
MIRT928740	hsa-miR-323-5p	CLIP-seq
MIRT928741	hsa-miR-326	CLIP-seq
MIRT928742	hsa-miR-329	CLIP-seq
MIRT928743	hsa-miR-330-5p	CLIP-seq
MIRT928744	hsa-miR-3591-3p	CLIP-seq
MIRT928745	hsa-miR-3607-5p	CLIP-seq
MIRT928746	hsa-miR-3616-3p	CLIP-seq
MIRT2514442	hsa-miR-3619-5p	CLIP-seq
MIRT928747	hsa-miR-3652	CLIP-seq
MIRT2514443	hsa-miR-3659	CLIP-seq
MIRT2210464	hsa-miR-3667-3p	CLIP-seq
MIRT928748	hsa-miR-3672	CLIP-seq
MIRT928749	hsa-miR-3678-3p	CLIP-seq
MIRT928750	hsa-miR-3692	CLIP-seq
MIRT928751	hsa-miR-3714	CLIP-seq
MIRT928752	hsa-miR-3922-5p	CLIP-seq
MIRT928753	hsa-miR-3925-3p	CLIP-seq
MIRT928754	hsa-miR-3926	CLIP-seq
MIRT2514444	hsa-miR-4260	CLIP-seq
MIRT2210465	hsa-miR-4286	CLIP-seq
MIRT2514445	hsa-miR-4301	CLIP-seq
MIRT928756	hsa-miR-4306	CLIP-seq
MIRT2514446	hsa-miR-4313	CLIP-seq
MIRT928757	hsa-miR-4318	CLIP-seq
MIRT928758	hsa-miR-4430	CLIP-seq
MIRT2514447	hsa-miR-4436b-3p	CLIP-seq
MIRT928760	hsa-miR-4446-3p	CLIP-seq
MIRT2514448	hsa-miR-4450	CLIP-seq
MIRT928761	hsa-miR-4463	CLIP-seq
MIRT928762	hsa-miR-4471	CLIP-seq
MIRT928763	hsa-miR-4474-3p	CLIP-seq
MIRT928764	hsa-miR-4488	CLIP-seq
MIRT928766	hsa-miR-449c	CLIP-seq
MIRT928767	hsa-miR-4505	CLIP-seq
MIRT2210466	hsa-miR-4511	CLIP-seq
MIRT928768	hsa-miR-4521	CLIP-seq
MIRT2210467	hsa-miR-4533	CLIP-seq
MIRT2514449	hsa-miR-4643	CLIP-seq
MIRT928769	hsa-miR-4644	CLIP-seq
MIRT2514450	hsa-miR-4658	CLIP-seq
MIRT928770	hsa-miR-4659a-3p	CLIP-seq
MIRT928771	hsa-miR-4659b-3p	CLIP-seq
MIRT2514451	hsa-miR-466	CLIP-seq
MIRT2514452	hsa-miR-4667-3p	CLIP-seq
MIRT928772	hsa-miR-4667-5p	CLIP-seq
MIRT928773	hsa-miR-4668-3p	CLIP-seq
MIRT928774	hsa-miR-4671-5p	CLIP-seq
MIRT928775	hsa-miR-4675	CLIP-seq
MIRT2210468	hsa-miR-4691-3p	CLIP-seq
MIRT928777	hsa-miR-4697-5p	CLIP-seq
MIRT928778	hsa-miR-4700-5p	CLIP-seq
MIRT2210470	hsa-miR-4707-5p	CLIP-seq
MIRT928779	hsa-miR-4716-3p	CLIP-seq
MIRT928780	hsa-miR-4723-5p	CLIP-seq
MIRT928781	hsa-miR-4728-5p	CLIP-seq
MIRT928782	hsa-miR-4735-3p	CLIP-seq
MIRT928783	hsa-miR-4741	CLIP-seq
MIRT928784	hsa-miR-4778-3p	CLIP-seq
MIRT928785	hsa-miR-4779	CLIP-seq
MIRT2514453	hsa-miR-4799-5p	CLIP-seq
MIRT928786	hsa-miR-486-3p	CLIP-seq
MIRT2514454	hsa-miR-491-5p	CLIP-seq
MIRT2210473	hsa-miR-500a	CLIP-seq
MIRT928789	hsa-miR-532-3p	CLIP-seq
MIRT2514455	hsa-miR-545	CLIP-seq
MIRT928793	hsa-miR-548s	CLIP-seq
MIRT2210475	hsa-miR-549	CLIP-seq
MIRT2514456	hsa-miR-574-5p	CLIP-seq
MIRT2514457	hsa-miR-583	CLIP-seq
MIRT928794	hsa-miR-601	CLIP-seq
MIRT928795	hsa-miR-637	CLIP-seq
MIRT928797	hsa-miR-760	CLIP-seq
MIRT2514458	hsa-miR-761	CLIP-seq
MIRT928798	hsa-miR-766	CLIP-seq
MIRT928799	hsa-miR-876-3p	CLIP-seq
MIRT2514459	hsa-miR-939	CLIP-seq
MIRT1975057	hsa-miR-1207-3p	CLIP-seq
MIRT928725	hsa-miR-1224-3p	CLIP-seq
MIRT2514434	hsa-miR-1236	CLIP-seq
MIRT928726	hsa-miR-1248	CLIP-seq
MIRT928727	hsa-miR-1260	CLIP-seq
MIRT928728	hsa-miR-1260b	CLIP-seq
MIRT928729	hsa-miR-1280	CLIP-seq
MIRT928730	hsa-miR-185	CLIP-seq
MIRT928731	hsa-miR-18a	CLIP-seq
MIRT928732	hsa-miR-18b	CLIP-seq
MIRT2514435	hsa-miR-2110	CLIP-seq
MIRT2514436	hsa-miR-214	CLIP-seq
MIRT2514437	hsa-miR-2355-5p	CLIP-seq
MIRT2210457	hsa-miR-23a	CLIP-seq
MIRT2210458	hsa-miR-23b	CLIP-seq
MIRT2210459	hsa-miR-23c	CLIP-seq
MIRT928733	hsa-miR-2467-3p	CLIP-seq
MIRT928734	hsa-miR-2682	CLIP-seq
MIRT928737	hsa-miR-3124-3p	CLIP-seq
MIRT2210460	hsa-miR-3128	CLIP-seq
MIRT2210461	hsa-miR-3133	CLIP-seq
MIRT2514439	hsa-miR-3150a-3p	CLIP-seq
MIRT1975058	hsa-miR-3153	CLIP-seq
MIRT2210462	hsa-miR-3157-5p	CLIP-seq
MIRT2514440	hsa-miR-3162-3p	CLIP-seq
MIRT1975059	hsa-miR-3162-5p	CLIP-seq
MIRT928738	hsa-miR-3165	CLIP-seq
MIRT2210463	hsa-miR-3173-3p	CLIP-seq
MIRT2514441	hsa-miR-3175	CLIP-seq
MIRT928739	hsa-miR-3185	CLIP-seq
MIRT928740	hsa-miR-323-5p	CLIP-seq
MIRT928741	hsa-miR-326	CLIP-seq
MIRT928742	hsa-miR-329	CLIP-seq
MIRT928743	hsa-miR-330-5p	CLIP-seq
MIRT928744	hsa-miR-3591-3p	CLIP-seq
MIRT928746	hsa-miR-3616-3p	CLIP-seq
MIRT2514442	hsa-miR-3619-5p	CLIP-seq
MIRT928747	hsa-miR-3652	CLIP-seq
MIRT2514443	hsa-miR-3659	CLIP-seq
MIRT2210464	hsa-miR-3667-3p	CLIP-seq
MIRT928749	hsa-miR-3678-3p	CLIP-seq
MIRT928750	hsa-miR-3692	CLIP-seq
MIRT928751	hsa-miR-3714	CLIP-seq
MIRT928752	hsa-miR-3922-5p	CLIP-seq
MIRT928753	hsa-miR-3925-3p	CLIP-seq
MIRT928754	hsa-miR-3926	CLIP-seq
MIRT2514444	hsa-miR-4260	CLIP-seq
MIRT2210465	hsa-miR-4286	CLIP-seq
MIRT2514445	hsa-miR-4301	CLIP-seq
MIRT928756	hsa-miR-4306	CLIP-seq
MIRT928757	hsa-miR-4318	CLIP-seq
MIRT928758	hsa-miR-4430	CLIP-seq
MIRT2514447	hsa-miR-4436b-3p	CLIP-seq
MIRT928760	hsa-miR-4446-3p	CLIP-seq
MIRT2514448	hsa-miR-4450	CLIP-seq
MIRT928762	hsa-miR-4471	CLIP-seq
MIRT928763	hsa-miR-4474-3p	CLIP-seq
MIRT928764	hsa-miR-4488	CLIP-seq
MIRT928766	hsa-miR-449c	CLIP-seq
MIRT928767	hsa-miR-4505	CLIP-seq
MIRT2210466	hsa-miR-4511	CLIP-seq
MIRT928768	hsa-miR-4521	CLIP-seq
MIRT2210467	hsa-miR-4533	CLIP-seq
MIRT2514449	hsa-miR-4643	CLIP-seq
MIRT928769	hsa-miR-4644	CLIP-seq
MIRT2514450	hsa-miR-4658	CLIP-seq
MIRT928770	hsa-miR-4659a-3p	CLIP-seq
MIRT928771	hsa-miR-4659b-3p	CLIP-seq
MIRT2514451	hsa-miR-466	CLIP-seq
MIRT2514452	hsa-miR-4667-3p	CLIP-seq
MIRT928772	hsa-miR-4667-5p	CLIP-seq
MIRT928773	hsa-miR-4668-3p	CLIP-seq
MIRT928774	hsa-miR-4671-5p	CLIP-seq
MIRT928775	hsa-miR-4675	CLIP-seq
MIRT2210468	hsa-miR-4691-3p	CLIP-seq
MIRT928777	hsa-miR-4697-5p	CLIP-seq
MIRT928778	hsa-miR-4700-5p	CLIP-seq
MIRT2210470	hsa-miR-4707-5p	CLIP-seq
MIRT928779	hsa-miR-4716-3p	CLIP-seq
MIRT928780	hsa-miR-4723-5p	CLIP-seq
MIRT928781	hsa-miR-4728-5p	CLIP-seq
MIRT928782	hsa-miR-4735-3p	CLIP-seq
MIRT928783	hsa-miR-4741	CLIP-seq
MIRT928784	hsa-miR-4778-3p	CLIP-seq
MIRT928785	hsa-miR-4779	CLIP-seq
MIRT2514453	hsa-miR-4799-5p	CLIP-seq
MIRT928786	hsa-miR-486-3p	CLIP-seq
MIRT2514454	hsa-miR-491-5p	CLIP-seq
MIRT2210473	hsa-miR-500a	CLIP-seq
MIRT928789	hsa-miR-532-3p	CLIP-seq
MIRT2514455	hsa-miR-545	CLIP-seq
MIRT928793	hsa-miR-548s	CLIP-seq
MIRT2210475	hsa-miR-549	CLIP-seq
MIRT2514456	hsa-miR-574-5p	CLIP-seq
MIRT2514457	hsa-miR-583	CLIP-seq
MIRT928794	hsa-miR-601	CLIP-seq
MIRT928795	hsa-miR-637	CLIP-seq
MIRT928797	hsa-miR-760	CLIP-seq
MIRT2514458	hsa-miR-761	CLIP-seq
MIRT928798	hsa-miR-766	CLIP-seq
MIRT928799	hsa-miR-876-3p	CLIP-seq
MIRT2514459	hsa-miR-939	CLIP-seq

Transcription factors

Transcription factor	Regulation	Reference
MYCN	Unknown	12527763
NF1	Unknown	12527763
SP1	Unknown	12527763
TP53	Activation	16357511
TP53	Repression	19382146

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000781	Component	Chromosome, telomeric region	HDA	19135898
GO:0003676	Function	Nucleic acid binding	IEA
GO:0003677	Function	DNA binding	IEA
GO:0003677	Function	DNA binding	TAS	8798680
GO:0003684	Function	Damaged DNA binding	IDA	22334663
GO:0003684	Function	Damaged DNA binding	TAS	8407967
GO:0005515	Function	Protein binding	IPI	9418871, 10777491, 12732143, 14739464, 16227264, 16473935, 16949367, 16964240, 17041588, 17314515, 17360488, 17932509, 19109893, 19264781, 19651607, 19966799, 20223979, 20562859, 20855601, 21113133, 21145461, 21988832, 22039351, 22157821, 22810585, 22822215, 23238014, 23314863, 2429
GO:0005615	Component	Extracellular space	HDA	22664934
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IDA	10585395, 30111536
GO:0005634	Component	Nucleus	IDA	14751237, 18593899, 20223979
GO:0005634	Component	Nucleus	IEA
GO:0005634	Component	Nucleus	NAS	22118460
GO:0005654	Component	Nucleoplasm	IDA
GO:0005654	Component	Nucleoplasm	TAS
GO:0005730	Component	Nucleolus	IDA	11673459
GO:0005737	Component	Cytoplasm	IDA	18593899, 20223979, 23137809
GO:0005737	Component	Cytoplasm	IEA
GO:0006281	Process	DNA repair	IBA
GO:0006281	Process	DNA repair	IEA
GO:0006281	Process	DNA repair	TAS	8798680
GO:0006289	Process	Nucleotide-excision repair	TAS	8407967
GO:0006511	Process	Ubiquitin-dependent protein catabolic process	IDA	11673459
GO:0006511	Process	Ubiquitin-dependent protein catabolic process	IEA
GO:0006511	Process	Ubiquitin-dependent protein catabolic process	IMP	26431207
GO:0006915	Process	Apoptotic process	IEA
GO:0006974	Process	DNA damage response	EXP	22118460
GO:0006974	Process	DNA damage response	IEA
GO:0006974	Process	DNA damage response	IMP	16949367
GO:0006974	Process	DNA damage response	ISS
GO:0007056	Process	Spindle assembly involved in female meiosis	IDA	31492966
GO:0007056	Process	Spindle assembly involved in female meiosis	IDA	31492966
GO:0010498	Process	Proteasomal protein catabolic process	IMP	25970626
GO:0016055	Process	Wnt signaling pathway	IEA
GO:0016567	Process	Protein ubiquitination	IDA	26431207, 28886238
GO:0016567	Process	Protein ubiquitination	IEA
GO:0016567	Process	Protein ubiquitination	IMP	28437394
GO:0019076	Process	Viral release from host cell	IMP	23137809
GO:0030674	Function	Protein-macromolecule adaptor activity	IPI	14739464
GO:0031464	Component	Cul4A-RING E3 ubiquitin ligase complex	EXP	22118460
GO:0031464	Component	Cul4A-RING E3 ubiquitin ligase complex	IDA	12732143, 14739464, 18794347, 20129063, 20223979
GO:0031464	Component	Cul4A-RING E3 ubiquitin ligase complex	IEA
GO:0031465	Component	Cul4B-RING E3 ubiquitin ligase complex	IDA	18794347, 21628527, 22334663
GO:0032991	Component	Protein-containing complex	IMP	28437394
GO:0034644	Process	Cellular response to UV	EXP	22118460
GO:0034644	Process	Cellular response to UV	IEA
GO:0034644	Process	Cellular response to UV	ISS
GO:0035234	Process	Ectopic germ cell programmed cell death	IEA
GO:0035861	Component	Site of double-strand break	IBA
GO:0042752	Process	Regulation of circadian rhythm	IEA
GO:0043066	Process	Negative regulation of apoptotic process	IEA
GO:0043161	Process	Proteasome-mediated ubiquitin-dependent protein catabolic process	IBA
GO:0043161	Process	Proteasome-mediated ubiquitin-dependent protein catabolic process	IDA	30111536, 31492966
GO:0043161	Process	Proteasome-mediated ubiquitin-dependent protein catabolic process	IDA	30111536, 31492966
GO:0043161	Process	Proteasome-mediated ubiquitin-dependent protein catabolic process	IMP	14739464, 20223979
GO:0044725	Process	Epigenetic programming in the zygotic pronuclei	IDA	30111536
GO:0044725	Process	Epigenetic programming in the zygotic pronuclei	IDA	30111536
GO:0044877	Function	Protein-containing complex binding	IPI	11564863
GO:0045070	Process	Positive regulation of viral genome replication	IMP	23137809
GO:0045722	Process	Positive regulation of gluconeogenesis	IEA
GO:0045722	Process	Positive regulation of gluconeogenesis	ISS
GO:0045732	Process	Positive regulation of protein catabolic process	IDA	11027288, 16482215, 20870715, 27626656
GO:0045732	Process	Positive regulation of protein catabolic process	IDA	14739464, 16949367
GO:0045732	Process	Positive regulation of protein catabolic process	IMP	16949367
GO:0046726	Process	Positive regulation by virus of viral protein levels in host cell	IMP	23137809
GO:0048511	Process	Rhythmic process	IEA
GO:0051093	Process	Negative regulation of developmental process	IEA
GO:0051702	Process	Biological process involved in interaction with symbiont	IDA	23137809
GO:0051898	Process	Negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction	IDA	31492966
GO:0060337	Process	Type I interferon-mediated signaling pathway	IMP	23391734
GO:0070062	Component	Extracellular exosome	HDA	19056867
GO:0070914	Process	UV-damage excision repair	IDA	14751237, 22334663
GO:0071987	Function	WD40-repeat domain binding	IPI	16949367
GO:0080008	Component	Cul4-RING E3 ubiquitin ligase complex	IDA	18381890, 28886238, 31492966, 31686031, 32355176, 34526721
GO:0080008	Component	Cul4-RING E3 ubiquitin ligase complex	IEA
GO:0080008	Component	Cul4-RING E3 ubiquitin ligase complex	IMP	16949367
GO:0097510	Process	Base-excision repair, AP site formation via deaminated base removal	IDA	18973764
GO:0097602	Function	Cullin family protein binding	IDA	10585395
GO:0097602	Function	Cullin family protein binding	IPI	14739464
GO:0160072	Function	Ubiquitin ligase complex scaffold activity	IDA	30111536, 31492966
GO:1901990	Process	Regulation of mitotic cell cycle phase transition	IMP	17088560
GO:2000242	Process	Negative regulation of reproductive process	IEA

Other IDs

• MIM: 600045
• HGNC: 2717
• e!Ensembl: ENSG00000167986

Protein

• UniProt ID: Q16531
• Protein name: DNA damage-binding protein 1 (DDB p127 subunit) (DNA damage-binding protein a) (DDBa) (Damage-specific DNA-binding protein 1) (HBV X-associated protein 1) (XAP-1) (UV-damaged DNA-binding factor) (UV-damaged DNA-binding protein 1) (UV-DDB 1) (XPE-binding f
• Protein function: Protein, which is both involved in DNA repair and protein ubiquitination, as part of the UV-DDB complex and DCX (DDB1-CUL4-X-box) complexes, respectively (PubMed:14739464, PubMed:15448697, PubMed:16260596, PubMed:16407242, PubMed:16407252, PubMe
• PDB: 2B5L, 2B5M, 2B5N, 2HYE, 3E0C, 3EI1, 3EI2, 3EI3, 3EI4, 3I7H, 3I7K, 3I7L, 3I7N, 3I7O, 3I7P, 3I89, 3I8C, 3I8E, 4A08, 4A09, 4A0A, 4A0B, 4A0K, 4A0L, 4A11, 4CI1, 4CI2, 4CI3, 4E54, 4E5Z, 4TZ4, 5FQD, 5HXB, 5JK7, 5V3O, 6BN7, 6BN8, 6BN9, 6BNB, 6BOY, 6DSZ, 6FCV, 6H0F, 6H0G, 6PAI, 6Q0R, 6Q0V, 6Q0W, 6R8Y, 6R8Z, 6R90
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF10433	MMS1_N	75 → 543		Domain
  PF03178	CPSF_A	788 → 1099	CPSF A subunit region	Family

• Sequence:

  MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
  IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
  IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
  VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
  NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
  RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
  DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE
  TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
  QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
  LDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
  YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
  SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
  PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
  SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
  AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
  TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
  DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
  STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
  KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
  

• Sequence length: 1140

Pathways

KEGG:

Nucleotide excision repair
Ubiquitin mediated proteolysis
Hepatitis B
Human immunodeficiency virus 1 infection
Viral carcinogenesis

Reactome:

Recognition of DNA damage by PCNA-containing replication complex
DNA Damage Recognition in GG-NER
Formation of Incision Complex in GG-NER
Dual Incision in GG-NER
Formation of TC-NER Pre-Incision Complex
Transcription-Coupled Nucleotide Excision Repair (TC-NER)
Dual incision in TC-NER
Gap-filling DNA repair synthesis and ligation in TC-NER
Neddylation

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Causal
Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession	Evidence Score
Neurodevelopmental delay	Likely pathogenic	rs1231861984	RCV002274331	★★★★☆ ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
White-Kernohan syndrome	Pathogenic; Likely pathogenic	rs2134935097, rs2134934938, rs2134916397	RCV001541892 RCV001541893 RCV001541894	★★★★☆ ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Evidence Score
CONGENITAL HEART DEFECTS	—	Disgenet	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
DDB1-related disorder	Uncertain significance; Likely benign	ClinVar	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Heart, malformation of	Uncertain significance	ClinVar	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
STOMACH NEOPLASMS	—	CTD	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Syndromic intellectual disability	Uncertain significance	ClinVar	★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Associations from Text Mining
Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Adenocarcinoma of lung (disorder)	Lung adenocarcinoma	BEFREE	28192407, 28336923		★☆☆☆☆ Found in Text Mining only
Adrenocortical Carcinoma	Adrenocortical carcinoma	Pubtator	20231622	Associate	★☆☆☆☆ Found in Text Mining only
Brachydactyly	Brachydactyly	Pubtator	33743206	Associate	★☆☆☆☆ Found in Text Mining only
Carcinoma Ovarian Epithelial	Epithelial ovarian carcinoma	Pubtator	36934683	Associate	★☆☆☆☆ Found in Text Mining only
Carcinoma Renal Cell	Renal cell carcinoma	Pubtator	36934683	Associate	★☆☆☆☆ Found in Text Mining only
Carcinoma, Ovarian Epithelial	Ovarian Epithelial carcinoma	BEFREE	16357511		★☆☆☆☆ Found in Text Mining only
Colorectal Neoplasms	Colorectal neoplasm	Pubtator	34720086	Associate	★☆☆☆☆ Found in Text Mining only
Coronary Restenosis	Coronary restenosis	Pubtator	35968900	Associate	★☆☆☆☆ Found in Text Mining only
Hereditary Diffuse Gastric Cancer	Gastric Cancer	CTD_human_DG	21364753		★☆☆☆☆ Found in Text Mining only
Hypoxia	Hypoxia	Pubtator	35813480	Associate	★☆☆☆☆ Found in Text Mining only
Infertility Male	Male infertility	Pubtator	39267058	Associate	★☆☆☆☆ Found in Text Mining only
Intellectual Disability	Intellectual developmental disorder	Pubtator	33743206	Associate	★☆☆☆☆ Found in Text Mining only
Liver carcinoma	Liver carcinoma	BEFREE	18781669		★☆☆☆☆ Found in Text Mining only
Lupus Erythematosus Systemic	Systemic lupus erythematosus	Pubtator	27492607	Associate	★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of ovary	Ovarian cancer	BEFREE	16357511		★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of prostate	Prostate cancer	BEFREE	28212551		★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of stomach	Stomach Neoplasms	CTD_human_DG	21364753		★☆☆☆☆ Found in Text Mining only
Malignant tumor of colon	Colonic Neoplasms	BEFREE	23610444		★☆☆☆☆ Found in Text Mining only
Melanoma	Melanoma	Pubtator	23407396, 27487145	Associate	★☆☆☆☆ Found in Text Mining only
melanoma	Melanoma	BEFREE	27487145		★☆☆☆☆ Found in Text Mining only
Multiple Myeloma	Multiple myeloma	BEFREE	25860244		★☆☆☆☆ Found in Text Mining only
Myasthenia Gravis	Myasthenia gravis	Pubtator	35655486	Inhibit	★☆☆☆☆ Found in Text Mining only
Neoplasms	Neoplasms	BEFREE	18324346, 21205828, 2333286		★☆☆☆☆ Found in Text Mining only
Non-Small Cell Lung Carcinoma	Lung carcinoma	BEFREE	24082123		★☆☆☆☆ Found in Text Mining only
Obesity	Obesity	Pubtator	33743206	Associate	★☆☆☆☆ Found in Text Mining only
Oculocerebrorenal Syndrome	Oculocerebrorenal syndrome	Pubtator	16868967	Associate	★☆☆☆☆ Found in Text Mining only
Osteoarthritis	Osteoarthritis	Pubtator	33468167	Associate	★☆☆☆☆ Found in Text Mining only
Osteosarcoma	Osteosarcoma	BEFREE	28446751, 29499938, 31598391		★☆☆☆☆ Found in Text Mining only
Osteosarcoma	Osteosarcoma	Pubtator	28446751	Associate	★☆☆☆☆ Found in Text Mining only
ovarian neoplasm	Ovarian neoplasm	BEFREE	16357511		★☆☆☆☆ Found in Text Mining only
Ovarian Neoplasms	Ovarian neoplasm	Pubtator	28122348, 36934683	Associate	★☆☆☆☆ Found in Text Mining only
Prostate carcinoma	Prostate cancer	BEFREE	28212551		★☆☆☆☆ Found in Text Mining only
Prostatic Neoplasms	Prostatic neoplasm	Pubtator	28212551	Associate	★☆☆☆☆ Found in Text Mining only
Squamous Cell Carcinoma of Head and Neck	Squamous cell carcinoma	Pubtator	28379545	Inhibit	★☆☆☆☆ Found in Text Mining only
Squamous Cell Carcinoma of Head and Neck	Squamous cell carcinoma	Pubtator	36359803	Associate	★☆☆☆☆ Found in Text Mining only
Squamous cell carcinoma of the head and neck	Carcinoma Of The Head And Neck	BEFREE	28379545		★☆☆☆☆ Found in Text Mining only
Stomach Neoplasms	Stomach Neoplasms	CTD_human_DG	21364753		★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Syndactyly	Syndactyly	Pubtator	33743206	Associate	★☆☆☆☆ Found in Text Mining only
Urinary Bladder Neoplasms	Urinary bladder neoplasms	Pubtator	40524221	Associate	★☆☆☆☆ Found in Text Mining only
Vitelliform Macular Dystrophy	Vitelliform macular dystrophy	Pubtator	9445487	Associate	★☆☆☆☆ Found in Text Mining only
Vitelliform Macular Dystrophy	Vitelliform Macular Dystrophy	BEFREE	9781049		★☆☆☆☆ Found in Text Mining only
Xeroderma Pigmentosum	Xeroderma pigmentosum	Pubtator	11564863, 2333286, 30251654, 7523888	Associate	★☆☆☆☆ Found in Text Mining only
Xeroderma Pigmentosum	Xeroderma Pigmentosum	BEFREE	2333286, 30251654		★☆☆☆☆ Found in Text Mining only
Xeroderma Pigmentosum Complementation Group E	Xeroderma pigmentosum	Pubtator	16473935, 22334663	Associate	★☆☆☆☆ Found in Text Mining only
XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP E	Xeroderma Pigmentosum	BEFREE	16473935		★☆☆☆☆ Found in Text Mining only