Gene Gene information from NCBI Gene database.
Entrez ID 163351
Gene name Guanylate binding protein family member 6
Gene symbol GBP6
Synonyms (NCBI Gene)
-
Chromosome 1
Chromosome location 1p22.2
Summary Guanylate-binding proteins, such as GBP6, are induced by interferon and hydrolyze GTP to both GDP and GMP (Olszewski et al., 2006 [PubMed 16689661]).[supplied by OMIM, Dec 2008]
miRNA miRNA information provided by mirtarbase database.
352
miRTarBase ID miRNA Experiments Reference
MIRT645870 hsa-miR-3664-5p HITS-CLIP 23824327
MIRT645869 hsa-miR-4639-3p HITS-CLIP 23824327
MIRT645868 hsa-miR-3155a HITS-CLIP 23824327
MIRT645867 hsa-miR-3155b HITS-CLIP 23824327
MIRT645866 hsa-miR-484 HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
18
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0002376 Process Immune system process IEA
GO:0003924 Function GTPase activity IBA
GO:0003924 Function GTPase activity IEA
GO:0005515 Function Protein binding IPI 28514442, 33961781
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
612467 25395 ENSG00000183347
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q6ZN66
Protein name Guanylate-binding protein 6 (EC 3.6.5.-) (GTP-binding protein 6) (GBP-6) (Guanine nucleotide-binding protein 6)
Protein function Interferon (IFN)-inducible GTPase that plays important roles in innate immunity against a diverse range of bacterial, viral and protozoan pathogens, such as bacterial pathogens Listeria monocytogenes and Mycobacterium bovis BCG as well as the pr
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02263 GBP 18 281 Guanylate-binding protein, N-terminal domain Domain
PF02841 GBP_C 283 579 Guanylate-binding protein, C-terminal domain Domain
Sequence
Sequence length 633
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Interferon gamma signaling
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
1
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
TYPE 2 DIABETES MELLITUS GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Malignant Neoplasms Malignant Neoplasm BEFREE 31707626
★☆☆☆☆
Found in Text Mining only
Squamous cell carcinoma Carcinoma BEFREE 31707626
★☆☆☆☆
Found in Text Mining only
Squamous Cell Carcinoma of Head and Neck Squamous cell carcinoma Pubtator 19861202, 32269280 Associate
★☆☆☆☆
Found in Text Mining only
Squamous cell carcinoma of lip Carcinoma of Lip BEFREE 31707626
★☆☆☆☆
Found in Text Mining only
Squamous cell carcinoma of tongue Tongue carcinoma BEFREE 31707626
★☆☆☆☆
Found in Text Mining only
Stomach Neoplasms Stomach neoplasms Pubtator 31959204 Associate
★☆☆☆☆
Found in Text Mining only