Gene Gene information from NCBI Gene database.
Entrez ID 1604
Gene name CD55 molecule (Cromer blood group)
Gene symbol CD55
Synonyms (NCBI Gene)
CHAPLECRCROMDAFTC
Chromosome 1
Chromosome location 1q32.2
Summary This gene encodes a glycoprotein involved in the regulation of the complement cascade. Binding of the encoded protein to complement proteins accelerates their decay, thereby disrupting the cascade and preventing damage to host cells. Antigens present on t
SNPs SNP information provided by dbSNP.
9
SNP ID Visualize variation Clinical significance Consequence
rs121909603 G>A Affects Stop gained, non coding transcript variant, coding sequence variant
rs869312818 G>A Affects Missense variant, coding sequence variant, non coding transcript variant
rs1114167430 C>- Pathogenic Frameshift variant, coding sequence variant, non coding transcript variant
rs1131690771 C>A Affects Stop gained, coding sequence variant, non coding transcript variant
rs1135402914 C>T Pathogenic Missense variant, coding sequence variant, non coding transcript variant
miRNA miRNA information provided by mirtarbase database.
239
miRTarBase ID miRNA Experiments Reference
MIRT021757 hsa-miR-132-3p Microarray 17612493
MIRT022237 hsa-miR-124-3p Proteomics;Microarray 18668037
MIRT031474 hsa-miR-16-5p Proteomics 18668040
MIRT052481 hsa-let-7a-5p CLASH 23622248
MIRT507832 hsa-miR-548m HITS-CLIP 21572407
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
37
GO ID Ontology Definition Evidence Reference
GO:0000139 Component Golgi membrane TAS
GO:0001618 Function Virus receptor activity IDA 7525274
GO:0001618 Function Virus receptor activity IEA
GO:0002376 Process Immune system process IEA
GO:0002706 Process Regulation of lymphocyte mediated immunity IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
125240 2665 ENSG00000196352
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P08174
Protein name Complement decay-accelerating factor (CD antigen CD55)
Protein function This protein recognizes C4b and C3b fragments that condense with cell-surface hydroxyl or amino groups when nascent C4b and C3b are locally generated during C4 and c3 activation. Interaction of daf with cell-associated C4b and C3b polypeptides i
PDB 1H03 , 1H04 , 1H2P , 1H2Q , 1M11 , 1NWV , 1OJV , 1OJW , 1OJY , 1OK1 , 1OK2 , 1OK3 , 1OK9 , 1UOT , 1UPN , 2C8I , 2QZD , 2QZF , 2QZH , 3IYP , 3J24 , 5FOA , 6ILJ , 6ILK , 6LA5 , 7C9W , 7DO4 , 7VY5 , 7VY6 , 8B8R , 8K9R , 8K9T
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00084 Sushi 36 94 Sushi repeat (SCR repeat) Domain
PF00084 Sushi 98 158 Sushi repeat (SCR repeat) Domain
PF00084 Sushi 163 220 Sushi repeat (SCR repeat) Domain
PF00084 Sushi 225 283 Sushi repeat (SCR repeat) Domain
Tissue specificity TISSUE SPECIFICITY: Expressed on the plasma membranes of all cell types that are in intimate contact with plasma complement proteins. It is also found on the surfaces of epithelial cells lining extracellular compartments, and variants of the molecule are
Sequence
Sequence length 381
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Complement and coagulation cascades
Hematopoietic cell lineage
Viral myocarditis
  Class B/2 (Secretin family receptors)
Neutrophil degranulation
COPI-mediated anterograde transport
Regulation of Complement cascade
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
18
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
CD55-related disorder Likely pathogenic rs376304458, rs1458492476, rs2526922942 RCV003418346
RCV003404348
RCV003397538
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Complement hyperactivation-angiopathic thrombosis-protein-losing enteropathy syndrome Likely pathogenic; Pathogenic rs752360687, rs773074921, rs1114167430, rs1135402914, rs1135402915, rs1135402916, rs1135402917, rs1135402918 RCV002499775
RCV003989924
RCV004577333
RCV004999542
RCV004577334
View all (3 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Cromer blood group system Likely pathogenic; Pathogenic rs752360687, rs121909603 RCV002499775
RCV000018367
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
CROMER BLOOD GROUP SYSTEM, Dr(a-) PHENOTYPE Pathogenic rs1135402914 RCV000497258
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acute myeloid leukemia Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ALZHEIMER DISEASE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AMPHETAMINE OR RELATED ACTING SYMPATHOMIMETIC ABUSE Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AMPHETAMINE-RELATED DISORDERS CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute leukemia Leukemia BEFREE 9238050
★☆☆☆☆
Found in Text Mining only
Acute lymphocytic leukemia Lymphocytic Leukemia BEFREE 10680700
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma BEFREE 28008159
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Of Esophagus Esophageal Cancer BEFREE 26202380
★☆☆☆☆
Found in Text Mining only
Adenomatous Polyposis Coli Multiple polyposis syndrome BEFREE 7745323
★☆☆☆☆
Found in Text Mining only
Adult Acute Lymphocytic Leukemia Lymphocytic Leukemia BEFREE 10680700
★☆☆☆☆
Found in Text Mining only
Age related macular degeneration Age-related macular degeneration BEFREE 20688727, 22024702
★☆☆☆☆
Found in Text Mining only
Alzheimer Disease Alzheimer disease Pubtator 31216356 Associate
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Alzheimer Disease, Late Onset Alzheimer disease BEFREE 31216356
★☆☆☆☆
Found in Text Mining only
Amyloidosis Amyloidosis BEFREE 28119052, 30365103, 30905309
★☆☆☆☆
Found in Text Mining only