LYSMD4 (LysM domain containing 4)

Gene

• Entrez ID: 145748
• Gene name: LysM domain containing 4
• Gene symbol: LYSMD4
• Synonyms (NCBI Gene): -
• Chromosome: 15
• Chromosome location: 15q26.3

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT1124223	hsa-miR-128	CLIP-seq
MIRT1124224	hsa-miR-1539	CLIP-seq
MIRT1124225	hsa-miR-1827	CLIP-seq
MIRT1124226	hsa-miR-193a-3p	CLIP-seq
MIRT1124227	hsa-miR-193b	CLIP-seq
MIRT1124228	hsa-miR-1972	CLIP-seq
MIRT1124229	hsa-miR-1976	CLIP-seq
MIRT1124230	hsa-miR-2277-3p	CLIP-seq
MIRT1124231	hsa-miR-2467-3p	CLIP-seq
MIRT1124232	hsa-miR-25	CLIP-seq
MIRT1124233	hsa-miR-27a	CLIP-seq
MIRT1124234	hsa-miR-27b	CLIP-seq
MIRT1124235	hsa-miR-2861	CLIP-seq
MIRT1124236	hsa-miR-302f	CLIP-seq
MIRT1124237	hsa-miR-3065-3p	CLIP-seq
MIRT1124238	hsa-miR-3178	CLIP-seq
MIRT1124239	hsa-miR-3193	CLIP-seq
MIRT1124240	hsa-miR-32	CLIP-seq
MIRT1124241	hsa-miR-320a	CLIP-seq
MIRT1124242	hsa-miR-320b	CLIP-seq
MIRT1124243	hsa-miR-320c	CLIP-seq
MIRT1124244	hsa-miR-320d	CLIP-seq
MIRT1124245	hsa-miR-320e	CLIP-seq
MIRT1124246	hsa-miR-337-3p	CLIP-seq
MIRT1124247	hsa-miR-3545-3p	CLIP-seq
MIRT1124248	hsa-miR-363	CLIP-seq
MIRT1124249	hsa-miR-367	CLIP-seq
MIRT1124250	hsa-miR-3678-3p	CLIP-seq
MIRT1124251	hsa-miR-421	CLIP-seq
MIRT1124252	hsa-miR-4429	CLIP-seq
MIRT1124253	hsa-miR-4435	CLIP-seq
MIRT1124254	hsa-miR-4486	CLIP-seq
MIRT1124255	hsa-miR-455-3p	CLIP-seq
MIRT1124256	hsa-miR-4639-5p	CLIP-seq
MIRT1124257	hsa-miR-4649-3p	CLIP-seq
MIRT1124258	hsa-miR-4650-5p	CLIP-seq
MIRT1124259	hsa-miR-4709-5p	CLIP-seq
MIRT1124260	hsa-miR-4756-3p	CLIP-seq
MIRT1124261	hsa-miR-512-3p	CLIP-seq
MIRT1124262	hsa-miR-615-5p	CLIP-seq
MIRT1124263	hsa-miR-92a	CLIP-seq
MIRT1124264	hsa-miR-92b	CLIP-seq
MIRT2035114	hsa-miR-150	CLIP-seq
MIRT1124225	hsa-miR-1827	CLIP-seq
MIRT2035115	hsa-miR-29a	CLIP-seq
MIRT2035116	hsa-miR-29b	CLIP-seq
MIRT2035117	hsa-miR-29c	CLIP-seq
MIRT1124237	hsa-miR-3065-3p	CLIP-seq
MIRT2035118	hsa-miR-4436b-3p	CLIP-seq
MIRT1124257	hsa-miR-4649-3p	CLIP-seq
MIRT2265532	hsa-miR-1229	CLIP-seq
MIRT2265533	hsa-miR-1912	CLIP-seq
MIRT1124237	hsa-miR-3065-3p	CLIP-seq
MIRT2265534	hsa-miR-4263	CLIP-seq
MIRT2265535	hsa-miR-4521	CLIP-seq
MIRT2265536	hsa-miR-4633-3p	CLIP-seq
MIRT2265537	hsa-miR-4639-3p	CLIP-seq
MIRT2265538	hsa-miR-4671-5p	CLIP-seq
MIRT2265539	hsa-miR-4761-3p	CLIP-seq
MIRT2265540	hsa-miR-516b	CLIP-seq
MIRT2564839	hsa-miR-1202	CLIP-seq
MIRT2564840	hsa-miR-1291	CLIP-seq
MIRT2564841	hsa-miR-141	CLIP-seq
MIRT2564842	hsa-miR-200a	CLIP-seq
MIRT1124237	hsa-miR-3065-3p	CLIP-seq
MIRT2564843	hsa-miR-3121-5p	CLIP-seq
MIRT2564844	hsa-miR-3125	CLIP-seq
MIRT2564845	hsa-miR-3166	CLIP-seq
MIRT2564846	hsa-miR-3173-3p	CLIP-seq
MIRT2564847	hsa-miR-328	CLIP-seq
MIRT2564848	hsa-miR-335	CLIP-seq
MIRT2564849	hsa-miR-3622b-5p	CLIP-seq
MIRT2564850	hsa-miR-3667-3p	CLIP-seq
MIRT2564851	hsa-miR-3692	CLIP-seq
MIRT2564852	hsa-miR-3914	CLIP-seq
MIRT2564853	hsa-miR-3916	CLIP-seq
MIRT2564854	hsa-miR-3928	CLIP-seq
MIRT2564855	hsa-miR-3972	CLIP-seq
MIRT2564856	hsa-miR-4276	CLIP-seq
MIRT2564857	hsa-miR-4480	CLIP-seq
MIRT2564858	hsa-miR-4514	CLIP-seq
MIRT2564859	hsa-miR-451b	CLIP-seq
MIRT2265537	hsa-miR-4639-3p	CLIP-seq
MIRT2564860	hsa-miR-4645-5p	CLIP-seq
MIRT2564861	hsa-miR-4673	CLIP-seq
MIRT2564862	hsa-miR-4692	CLIP-seq
MIRT2564863	hsa-miR-4755-3p	CLIP-seq
MIRT2564864	hsa-miR-4776-3p	CLIP-seq
MIRT2564865	hsa-miR-4793-5p	CLIP-seq
MIRT2564866	hsa-miR-542-3p	CLIP-seq
MIRT2564867	hsa-miR-642b	CLIP-seq
MIRT2564868	hsa-miR-649	CLIP-seq
MIRT2564869	hsa-miR-663b	CLIP-seq
MIRT2564870	hsa-miR-668	CLIP-seq
MIRT2564871	hsa-miR-877	CLIP-seq
MIRT2684386	hsa-miR-1185	CLIP-seq
MIRT2684387	hsa-miR-3120-3p	CLIP-seq
MIRT2564848	hsa-miR-335	CLIP-seq
MIRT2684388	hsa-miR-3605-5p	CLIP-seq
MIRT2684389	hsa-miR-3679-5p	CLIP-seq
MIRT2564859	hsa-miR-451b	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0016020	Component	Membrane	IEA

Other IDs

• MIM: HGNC
• HGNC: N/A
• e!Ensembl: HGNC

Protein

• UniProt ID: Q5XG99
• Protein name: LysM and putative peptidoglycan-binding domain-containing protein 4
• Sequence:

  MRHEELLTKTFQGPAVVCGTPTSHVYMFKNGSGDSGDSSEEESHRVVLRPRGKERHKSGV
  HQPPQAGAGDVVLLQRELAQEDSLNKLALQYGCKVADIKKVNNFIREQDLYALKSVKIPV
  RNHGILMETHKELKPLLSPSSETTVTVELPEADRAGAGTGAQAGQLMGFFKGIDQDIERA
  VQSEIFLHESYCMDTSHQPLLPAPPKTPMDGADCGIQWWNAVFIMLLIGIVLPVFYLVYF
  KIQASGETPNSLNTTVIPNGSMAMGTVPGQAPRLAVAVPAVTSADSQFSQTTQAGS

• Sequence length: 296

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Evidence Score
MAJOR DEPRESSIVE DISORDER	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Associations from Text Mining
Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Chronic Obstructive Airway Disease	Chronic Obstructive Pulmonary Disease	GWASCAT_DG	26634245		★☆☆☆☆ Found in Text Mining only