Gene Gene information from NCBI Gene database.
Entrez ID 1400
Gene name Collapsin response mediator protein 1
Gene symbol CRMP1
Synonyms (NCBI Gene)
CRMP-1DPYSL1DRP-1DRP1ULIP-3
Chromosome 4
Chromosome location 4p16.2
Summary This gene encodes a member of a family of cytosolic phosphoproteins expressed exclusively in the nervous system. The encoded protein is thought to be a part of the semaphorin signal transduction pathway implicated in semaphorin-induced growth cone collaps
miRNA miRNA information provided by mirtarbase database.
170
miRTarBase ID miRNA Experiments Reference
MIRT569829 hsa-miR-4781-5p PAR-CLIP 20371350
MIRT569828 hsa-miR-151a-5p PAR-CLIP 20371350
MIRT569827 hsa-miR-151b PAR-CLIP 20371350
MIRT569826 hsa-miR-3150b-3p PAR-CLIP 20371350
MIRT569825 hsa-miR-4784 PAR-CLIP 20371350
Transcription factors Transcription factors information provided by TRRUST V2 database.
3
Transcription factor Regulation Reference
CEBPA Unknown 18524846
NFKB1 Unknown 18782567
SP1 Unknown 18524846
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
31
GO ID Ontology Definition Evidence Reference
GO:0004157 Function Dihydropyrimidinase activity IBA
GO:0005515 Function Protein binding IPI 15383276, 16169070, 21900206, 24722188, 25416956, 32296183, 32814053
GO:0005737 Component Cytoplasm IEA
GO:0005813 Component Centrosome IDA
GO:0005813 Component Centrosome IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
602462 2365 ENSG00000072832
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q14194
Protein name Dihydropyrimidinase-related protein 1 (DRP-1) (Collapsin response mediator protein 1) (CRMP-1) (Inactive dihydropyrimidinase) (Unc-33-like phosphoprotein 3) (ULIP-3)
Protein function Necessary for signaling by class 3 semaphorins and subsequent remodeling of the cytoskeleton (PubMed:25358863). Plays a role in axon guidance (PubMed:25358863). During the axon guidance process, acts downstream of SEMA3A to promote FLNA dissocia
PDB 4B3Z
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01979 Amidohydro_1 64 453 Amidohydrolase family Domain
Tissue specificity TISSUE SPECIFICITY: Brain.
Sequence
Sequence length 572
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    CRMPs in Sema3A signaling
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
7
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ANHEDONIA, SOCIAL Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Clear cell carcinoma of kidney Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
EBV-positive nodal T- and NK-cell lymphoma Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Malignant tumor of esophagus Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adenocarcinoma Adenocarcinoma LHGDN 14996858
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of lung (disorder) Lung adenocarcinoma BEFREE 14996858
★☆☆☆☆
Found in Text Mining only
Adult Medulloblastoma Medulloblastoma BEFREE 26009886, 28025999
★☆☆☆☆
Found in Text Mining only
Amyloidosis Amyloidosis BEFREE 27677309
★☆☆☆☆
Found in Text Mining only
Amyotrophic Lateral Sclerosis Amyotrophic Lateral Sclerosis BEFREE 23713734, 29335339
★☆☆☆☆
Found in Text Mining only
Arteriosclerosis Arteriosclerosis BEFREE 27737949
★☆☆☆☆
Found in Text Mining only
Atherosclerosis Atherosclerosis BEFREE 27737949
★☆☆☆☆
Found in Text Mining only
Bipolar Disorder Bipolar Disorder BEFREE 29666369
★☆☆☆☆
Found in Text Mining only
Bipolar Disorder Bipolar disorder Pubtator 29666369 Associate
★☆☆☆☆
Found in Text Mining only
Brain Infarction Brain Infarction BEFREE 24758576
★☆☆☆☆
Found in Text Mining only