TMEM42 (transmembrane protein 42)

Gene

• Entrez ID: 131616
• Gene name: Transmembrane protein 42
• Gene symbol: TMEM42
• Synonyms (NCBI Gene): -
• Chromosome: 3
• Chromosome location: 3p21.31

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT038913	hsa-miR-93-3p	CLASH	23622248
MIRT1437360	hsa-miR-1271	CLIP-seq
MIRT1437361	hsa-miR-182	CLIP-seq
MIRT1437362	hsa-miR-4436a	CLIP-seq
MIRT1437363	hsa-miR-4700-3p	CLIP-seq
MIRT1437364	hsa-miR-96	CLIP-seq
MIRT2131050	hsa-miR-1184	CLIP-seq
MIRT2131051	hsa-miR-1301	CLIP-seq
MIRT2131052	hsa-miR-141	CLIP-seq
MIRT2131053	hsa-miR-200a	CLIP-seq
MIRT2131054	hsa-miR-3130-3p	CLIP-seq
MIRT2131055	hsa-miR-4310	CLIP-seq
MIRT2131056	hsa-miR-4660	CLIP-seq
MIRT2131057	hsa-miR-499-3p	CLIP-seq
MIRT2131058	hsa-miR-499a-3p	CLIP-seq
MIRT2131059	hsa-miR-5047	CLIP-seq
MIRT2352333	hsa-miR-1297	CLIP-seq
MIRT2352334	hsa-miR-26a	CLIP-seq
MIRT2352335	hsa-miR-26b	CLIP-seq
MIRT2352336	hsa-miR-4465	CLIP-seq
MIRT2352337	hsa-miR-4704-3p	CLIP-seq
MIRT2352338	hsa-miR-4777-5p	CLIP-seq
MIRT2352339	hsa-miR-498	CLIP-seq
MIRT2352340	hsa-miR-518d-5p	CLIP-seq
MIRT2352341	hsa-miR-519b-5p	CLIP-seq
MIRT2352342	hsa-miR-519c-5p	CLIP-seq
MIRT2352343	hsa-miR-520c-5p	CLIP-seq
MIRT2352344	hsa-miR-526a	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	32296183
GO:0016020	Component	Membrane	IEA

Other IDs

• MIM: HGNC
• HGNC: N/A
• e!Ensembl: HGNC

Protein

• UniProt ID: Q69YG0
• Protein name: Transmembrane protein 42
• Sequence:

  MAERPGPPGGAVSATAYPDTPAEFPPHLQAGAMRRRFWGVFNCLCAGAFGALAAASAKLA
  FGSEVSMGLCVLGIIVMASTNSLMWTFFSRGLSFSMSSAIASVTVTFSNILSSAFLGYVL
  YGECQEVLWWGGVFLILCGLTLIHRKLPPTWKPLPHKQQ

• Sequence length: 159

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Evidence Score
IDIOPATHIC PULMONARY FIBROSIS	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
MAJOR DEPRESSIVE DISORDER	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations