Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID	128710
Gene name	SLX4 interacting protein
Gene symbol	SLX4IP
Synonyms (NCBI Gene)	C20orf94bA204H22.1bA254M13.1dJ1099D15.3
Chromosome	20
Chromosome location	20p12.2

Show/Hide all (47)

miRTarBase ID	miRNA	Experiments	Reference
MIRT019191	hsa-miR-335-5p	Microarray	18185580
MIRT699198	hsa-miR-512-5p	HITS-CLIP	23313552
MIRT699197	hsa-miR-510-5p	HITS-CLIP	23313552
MIRT699196	hsa-miR-4524b-3p	HITS-CLIP	23313552
MIRT699195	hsa-miR-4695-5p	HITS-CLIP	23313552
MIRT699194	hsa-miR-3929	HITS-CLIP	23313552
MIRT699193	hsa-miR-4419b	HITS-CLIP	23313552
MIRT699192	hsa-miR-4478	HITS-CLIP	23313552
MIRT699191	hsa-miR-5588-3p	HITS-CLIP	23313552
MIRT699190	hsa-miR-2114-5p	HITS-CLIP	23313552
MIRT699189	hsa-miR-4757-3p	HITS-CLIP	23313552
MIRT699188	hsa-miR-5690	HITS-CLIP	23313552
MIRT699187	hsa-miR-4768-3p	HITS-CLIP	23313552
MIRT699186	hsa-miR-4459	HITS-CLIP	23313552
MIRT699185	hsa-miR-4433a-3p	HITS-CLIP	23313552
MIRT699184	hsa-miR-3664-3p	HITS-CLIP	23313552
MIRT699183	hsa-miR-4329	HITS-CLIP	23313552
MIRT699182	hsa-miR-3137	HITS-CLIP	23313552
MIRT699181	hsa-miR-20b-3p	HITS-CLIP	23313552
MIRT699180	hsa-miR-4524a-3p	HITS-CLIP	23313552
MIRT699179	hsa-miR-485-5p	HITS-CLIP	23313552
MIRT699178	hsa-miR-6884-5p	HITS-CLIP	23313552
MIRT699177	hsa-miR-7977	HITS-CLIP	23313552
MIRT699176	hsa-miR-665	HITS-CLIP	23313552
MIRT699198	hsa-miR-512-5p	HITS-CLIP	23313552
MIRT699197	hsa-miR-510-5p	HITS-CLIP	23313552
MIRT699196	hsa-miR-4524b-3p	HITS-CLIP	23313552
MIRT699195	hsa-miR-4695-5p	HITS-CLIP	23313552
MIRT699194	hsa-miR-3929	HITS-CLIP	23313552
MIRT699193	hsa-miR-4419b	HITS-CLIP	23313552
MIRT699192	hsa-miR-4478	HITS-CLIP	23313552
MIRT699191	hsa-miR-5588-3p	HITS-CLIP	23313552
MIRT699190	hsa-miR-2114-5p	HITS-CLIP	23313552
MIRT699189	hsa-miR-4757-3p	HITS-CLIP	23313552
MIRT699188	hsa-miR-5690	HITS-CLIP	23313552
MIRT699187	hsa-miR-4768-3p	HITS-CLIP	23313552
MIRT699186	hsa-miR-4459	HITS-CLIP	23313552
MIRT699185	hsa-miR-4433a-3p	HITS-CLIP	23313552
MIRT699184	hsa-miR-3664-3p	HITS-CLIP	23313552
MIRT699183	hsa-miR-4329	HITS-CLIP	23313552
MIRT699182	hsa-miR-3137	HITS-CLIP	23313552
MIRT699181	hsa-miR-20b-3p	HITS-CLIP	23313552
MIRT699180	hsa-miR-4524a-3p	HITS-CLIP	23313552
MIRT699179	hsa-miR-485-5p	HITS-CLIP	23313552
MIRT699178	hsa-miR-6884-5p	HITS-CLIP	23313552
MIRT699177	hsa-miR-7977	HITS-CLIP	23313552
MIRT699176	hsa-miR-665	HITS-CLIP	23313552

Show/Hide all (1)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	19596235

MIM	HGNC	e!Ensembl
615958	16225	ENSG00000149346

Q5VYV7

Protein name

Protein SLX4IP (SLX4-interacting protein)

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF15744	UPF0492	10 → 368	Uncharacterized protein family UPF0492	Family

Sequence

MASKKFAVKCGNFAVLVDLHILPQGSNKDTSWFSEQKKEEVCLLLKETIDSRVQEYLEVR
KQHRPSNAEFTRSNPLSLKGYGFQITAYFLKRGIRLRCIRSTQNAELCVFPDRFVVCVSQ
LAFSRDLLASQNEDLTERVLHGVSDYFAECAESSLPPSAKLRRNALKEIVKRTETKSSVT
SKSQTRRDTVETSSDSVIAEIARRRNDGQASSSPPSESMGQAKDSIKAAESHWGLPVQKL
EKVNQTQPEDTSGQQKPHPGERLKTGLLSRSPVCSCESASPCPKQSPRVAKTQQKRRNCS
SAEDFDHHGRVSLGSDRLVPREIIVEKSKAVRVLPASELSDPGLLLKQDLAKTTSKEELH
VLESLSSRHLMKNNPGQAQQTGLATNTERLSTIQNSPTKKRKKYERGH

Sequence length

408

Interactions

View interactions

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Unknown Diseases (3)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
ANDROGENETIC ALOPECIA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
PROSTATE CANCER	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
PROSTATE CARCINOMA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Show/Hide Text Mining Associations (5)

Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Associations from Text Mining Disease associations identified through text mining
Acute lymphocytic leukemia	Lymphocytic Leukemia	BEFREE	24045615		★★★★★ ★☆☆☆☆ Found in Text Mining only
Adult Acute Lymphocytic Leukemia	Lymphocytic Leukemia	BEFREE	24045615		★★★★★ ★☆☆☆☆ Found in Text Mining only
Childhood Acute Lymphoblastic Leukemia	Lymphoblastic Leukemia	BEFREE	24045615		★★★★★ ★☆☆☆☆ Found in Text Mining only
Leukemia Myeloid Acute	Myeloid leukemia	Pubtator	30480765	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Osteosarcoma	Osteosarcoma	BEFREE	31447390		★★★★★ ★☆☆☆☆ Found in Text Mining only

SLX4IP (SLX4 interacting protein)