Gene Gene information from NCBI Gene database.
Entrez ID 1236
Gene name C-C motif chemokine receptor 7
Gene symbol CCR7
Synonyms (NCBI Gene)
BLR2CC-CKR-7CCR-7CD197CDw197CMKBR7EBI1
Chromosome 17
Chromosome location 17q21.2
Summary The protein encoded by this gene is a member of the G protein-coupled receptor family. This receptor was identified as a gene induced by the Epstein-Barr virus (EBV), and is thought to be a mediator of EBV effects on B lymphocytes. This receptor is expres
miRNA miRNA information provided by mirtarbase database.
36
miRTarBase ID miRNA Experiments Reference
MIRT006813 hsa-let-7a-5p Luciferase reporter assayNorthern blotqRT-PCRWestern blot 22251626
MIRT018216 hsa-miR-335-5p Microarray 18185580
MIRT440980 hsa-miR-21-5p HITS-CLIP 22473208
MIRT440980 hsa-miR-21-5p HITS-CLIP 22473208
MIRT732313 hsa-miR-199a-5p Luciferase reporter assayqRT-PCR 27814720
Transcription factors Transcription factors information provided by TRRUST V2 database.
8
Transcription factor Regulation Reference
EPAS1 Activation 19305150
HIF1A Activation 17178876;19305150
KLF2 Unknown 20146713
NFKB1 Activation 11830455;19164127
NFKB1 Unknown 22158872
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
97
GO ID Ontology Definition Evidence Reference
GO:0001768 Process Establishment of T cell polarity IC 12729902
GO:0001954 Process Positive regulation of cell-matrix adhesion IC 15569314
GO:0002407 Process Dendritic cell chemotaxis IC 15778365
GO:0002408 Process Myeloid dendritic cell chemotaxis IDA 11602640, 14592837
GO:0002606 Process Positive regulation of dendritic cell antigen processing and presentation IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
600242 1608 ENSG00000126353
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P32248
Protein name C-C chemokine receptor type 7 (C-C CKR-7) (CC-CKR-7) (CCR-7) (BLR2) (CDw197) (Epstein-Barr virus-induced G-protein coupled receptor 1) (EBI1) (EBV-induced G-protein coupled receptor 1) (MIP-3 beta receptor) (CD antigen CD197)
Protein function Receptor for the MIP-3-beta chemokine. Probable mediator of EBV effects on B-lymphocytes or of normal lymphocyte functions.
PDB 6QZH
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00001 7tm_1 75 326 7 transmembrane receptor (rhodopsin family) Family
Tissue specificity TISSUE SPECIFICITY: Expressed in various lymphoid tissues and activated B- and T-lymphocytes, strongly up-regulated in B-cells infected with Epstein-Barr virus and T-cells infected with herpesvirus 6 or 7.
Sequence
Sequence length 378
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Cytokine-cytokine receptor interaction
Viral protein interaction with cytokine and cytokine receptor
Chemokine signaling pathway
  Chemokine receptors bind chemokines
G alpha (i) signalling events
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
21
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ALZHEIMER DISEASE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ANHEDONIA Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ASTHMA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ATOPIC ASTHMA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
5q-syndrome 5q-syndrome BEFREE 23054648
★☆☆☆☆
Found in Text Mining only
Acquired Hypogammaglobulinemia Common Variable Immunodeficiency BEFREE 15498038
★☆☆☆☆
Found in Text Mining only
Acute leukemia Leukemia BEFREE 18192504, 30278283, 8049440, 8932329
★☆☆☆☆
Found in Text Mining only
Acute lymphocytic leukemia Lymphocytic Leukemia BEFREE 17101562, 23054648, 27686375, 30787933, 7780155
★☆☆☆☆
Found in Text Mining only
Acute Megakaryocytic Leukemias Megakaryocytic Leukemia BEFREE 19016745, 30278283
★☆☆☆☆
Found in Text Mining only
Acute monocytic leukemia Monocytic Leukemia BEFREE 12393383, 12816872, 18181178, 18272813, 20357826, 22072540, 22488406, 22553314, 23008312, 28538183, 30214063, 8412328, 9266939
★☆☆☆☆
Found in Text Mining only
Acute myeloid leukemia, 11q23 abnormalities Myeloid Leukemia, 11q23 Abnormalities BEFREE 31649131
★☆☆☆☆
Found in Text Mining only
Acute Promyelocytic Leukemia Promyelocytic Leukemia BEFREE 11167805, 12200691, 23770046, 8049440, 9009083
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma LHGDN 18497951
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma BEFREE 23519840, 25168373
★☆☆☆☆
Found in Text Mining only