Gene Gene information from NCBI Gene database.
Entrez ID 1234
Gene name C-C motif chemokine receptor 5
Gene symbol CCR5
Synonyms (NCBI Gene)
CC-CKR-5CCCKR5CCR-5CD195CKR-5CKR5CMKBR5IDDM22
Chromosome 3
Chromosome location 3p21.31
Summary This gene encodes a member of the beta chemokine receptor family, which is predicted to be a seven transmembrane protein similar to G protein-coupled receptors. This protein is expressed by T cells and macrophages, and is known to be an important co-recep
miRNA miRNA information provided by mirtarbase database.
287
miRTarBase ID miRNA Experiments Reference
MIRT620771 hsa-miR-5193 HITS-CLIP 23824327
MIRT620769 hsa-miR-1237-3p HITS-CLIP 23824327
MIRT620768 hsa-miR-1248 HITS-CLIP 23824327
MIRT620767 hsa-miR-6889-3p HITS-CLIP 23824327
MIRT620766 hsa-miR-5008-3p HITS-CLIP 23824327
Transcription factors Transcription factors information provided by TRRUST V2 database.
5
Transcription factor Regulation Reference
KLF2 Activation 22988032
NFKB1 Unknown 12745546;19469019;9840284
NR3C2 Activation 11751947
RELA Unknown 12745546;19469019;9840284
YY1 Repression 12571248;15737629
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
64
GO ID Ontology Definition Evidence Reference
GO:0000165 Process MAPK cascade IEP 12032188
GO:0001618 Function Virus receptor activity IEA
GO:0001618 Function Virus receptor activity TAS 10228019
GO:0002407 Process Dendritic cell chemotaxis TAS 16621978
GO:0003779 Function Actin binding IDA 12421915
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
601373 1606 ENSG00000160791
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P51681
Protein name C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (CCR5) (CHEMR13) (HIV-1 fusion coreceptor) (CD antigen CD195)
Protein function Receptor for a number of inflammatory CC-chemokines including CCL3/MIP-1-alpha, CCL4/MIP-1-beta and RANTES and subsequently transduces a signal by increasing the intracellular calcium ion level. May play a role in the control of granulocytic lin
PDB 2L87 , 2MZX , 2RLL , 2RRS , 4MBS , 5UIW , 5YD3 , 5YD4 , 5YD5 , 5YY4 , 6FGP , 6MEO , 6MET , 7F1Q , 7F1R , 7F1S , 7NJZ , 7NW3 , 7O7F , 8AS2 , 8AS3
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00001 7tm_1 47 297 7 transmembrane receptor (rhodopsin family) Family
Tissue specificity TISSUE SPECIFICITY: Highly expressed in spleen, thymus, in the myeloid cell line THP-1, in the promyeloblastic cell line KG-1a and on CD4+ and CD8+ T-cells. Medium levels in peripheral blood leukocytes and in small intestine. Low levels in ovary and lung.
Sequence
Sequence length 352
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Viral life cycle - HIV-1
Virion - Human immunodeficiency virus
Cytokine-cytokine receptor interaction
Viral protein interaction with cytokine and cytokine receptor
Chemokine signaling pathway
Endocytosis
Toxoplasmosis
Human cytomegalovirus infection
Kaposi sarcoma-associated herpesvirus infection
Human immunodeficiency virus 1 infection
Viral carcinogenesis
  Binding and entry of HIV virion
Chemokine receptors bind chemokines
G alpha (i) signalling events
Interleukin-10 signaling
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
42
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acquired immunodeficiency syndrome, delayed progression to Conflicting classifications of pathogenicity; protective ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ASTHMA Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BEHCET SYNDROME Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CCR5 POLYMORPHISM, AFRICAN-AMERICAN Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acne Acne BEFREE 14759987
★☆☆☆☆
Found in Text Mining only
Acute Coronary Syndrome Coronary Syndrome BEFREE 28276569
★☆☆☆☆
Found in Text Mining only
Acute Kidney Insufficiency Acute Kidney Insufficiency CTD_human_DG 26055553
★☆☆☆☆
Found in Text Mining only
Acute leukemia Leukemia BEFREE 24819208
★☆☆☆☆
Found in Text Mining only
Acute lymphocytic leukemia Lymphocytic Leukemia BEFREE 29868623
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma LHGDN 16161154, 17653092
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of lung (disorder) Lung adenocarcinoma BEFREE 17653092
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of pancreas Pancreatic adenocarcinoma BEFREE 16614115
★☆☆☆☆
Found in Text Mining only
Adenoid Cystic Carcinoma Adenocarcinoma BEFREE 29549020
★☆☆☆☆
Found in Text Mining only
Adult Hodgkin Lymphoma Hodgkin Lymphoma BEFREE 30309853, 30836379
★☆☆☆☆
Found in Text Mining only