C15orf40 (chromosome 15 open reading frame 40)

Gene Gene information from NCBI Gene database.
Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID 123207
Gene name Chromosome 15 open reading frame 40
Gene symbol C15orf40
Synonyms (NCBI Gene)
-
Chromosome 15
Chromosome location 15q25.2
miRNA miRNA information provided by mirtarbase database.
486
Gene miRNA Gene ontology Other IDs Protein Associated diseases
Show/Hide all (486)
miRTarBase ID miRNA Experiments Reference
MIRT046840 hsa-miR-221-3p CLASH 23622248
MIRT518129 hsa-miR-4740-3p HITS-CLIP 23313552
MIRT695120 hsa-miR-4722-3p HITS-CLIP 23313552
MIRT695119 hsa-miR-6727-3p HITS-CLIP 23313552
MIRT695118 hsa-miR-6747-3p HITS-CLIP 23313552
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
2
Gene miRNA Gene ontology Other IDs Protein Associated diseases
Show/Hide all (2)
GO ID Ontology Definition Evidence Reference
GO:0005737 Component Cytoplasm IBA
GO:0005739 Component Mitochondrion HTP 34800366
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
Gene miRNA Gene ontology Other IDs Protein Associated diseases
MIM HGNC e!Ensembl
HGNC N/A HGNC
Protein Protein information from UniProt database.
Gene miRNA Gene ontology Other IDs Protein Associated diseases
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q8WUR7
Protein name UPF0235 protein C15orf40
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02594 DUF167 62 → 133 Uncharacterised ACR, YggU family COG1872 Domain
Sequence 
MLRLRSGLRHLRATPNTRGSARLLCAEMPKKAGATTKGKSQSKEPERPLPPLGPVAVDPK
GCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL
DKGGKSREKVVKLLASTTPEEILEKLKKEAKKT
Sequence length 153
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
2
Gene miRNA Gene ontology Other IDs Protein Associated diseases
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Show/Hide Unknown Diseases (2)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
CHRONIC OBSTRUCTIVE PULMONARY DISEASE — GWAS catalog
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
EBV-positive nodal T- and NK-cell lymphoma Likely benign ClinVar
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations