Gene Gene information from NCBI Gene database.
Entrez ID 122961
Gene name Iron-sulfur cluster assembly 2
Gene symbol ISCA2
Synonyms (NCBI Gene)
HBLD1ISA2MMDS4c14_5557
Chromosome 14
Chromosome location 14q24.3
Summary The protein encoded by this gene is an A-type iron-sulfur cluster (ISC) protein found in mitochondria. The encoded protein appears to be involved in the maturation of mitochondrial iron-sulfur proteins. Two transcript variants encoding different isoforms
miRNA miRNA information provided by mirtarbase database.
300
miRTarBase ID miRNA Experiments Reference
MIRT687877 hsa-miR-106a-5p HITS-CLIP 23313552
MIRT687876 hsa-miR-106b-5p HITS-CLIP 23313552
MIRT687875 hsa-miR-17-5p HITS-CLIP 23313552
MIRT687874 hsa-miR-20a-5p HITS-CLIP 23313552
MIRT687873 hsa-miR-20b-5p HITS-CLIP 23313552
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
16
GO ID Ontology Definition Evidence Reference
GO:0005506 Function Iron ion binding IBA
GO:0005515 Function Protein binding IPI 25347204, 25416956, 31831856, 32296183, 32814053, 33961781, 39408793
GO:0005739 Component Mitochondrion HTP 34800366
GO:0005739 Component Mitochondrion IBA
GO:0005739 Component Mitochondrion IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
615317 19857 ENSG00000165898
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q86U28
Protein name Iron-sulfur cluster assembly 2 homolog, mitochondrial (HESB-like domain-containing protein 1)
Protein function Involved in the maturation of mitochondrial 4Fe-4S proteins functioning late in the iron-sulfur cluster assembly pathway. May be involved in the binding of an intermediate of Fe/S cluster assembly.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01521 Fe-S_biosyn 49 148 Iron-sulphur cluster biosynthesis Family
Sequence
Sequence length 154
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Mitochondrial iron-sulfur cluster biogenesis
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
8
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Fatal multiple mitochondrial dysfunctions syndrome Likely pathogenic; Pathogenic rs730882246 RCV000310400
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Multiple mitochondrial dysfunctions syndrome 4 Likely pathogenic; Pathogenic rs730882246, rs191915715 RCV000170534
RCV003331765
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
GLOBAL DEVELOPMENTAL DELAY Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ISCA2-related disorder Likely benign; Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
MITOCHONDRIAL DISEASE ClinGen, GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
MITOCHONDRIAL DISEASES Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Brain Diseases Brain disease Pubtator 29297947 Associate
★☆☆☆☆
Found in Text Mining only
Brain Stem Neoplasms Brain stem neoplasms Pubtator 29297947 Associate
★☆☆☆☆
Found in Text Mining only
Carcinoma Renal Cell Renal cell carcinoma Pubtator 36097192 Inhibit
★☆☆☆☆
Found in Text Mining only
Carcinoma Renal Cell Renal cell carcinoma Pubtator 36385109 Associate
★☆☆☆☆
Found in Text Mining only
Diabetes Mellitus Type 2 Diabetes mellitus, type 2 Pubtator 39280009 Associate
★☆☆☆☆
Found in Text Mining only
Encephalopathies Epileptic encephalopathy BEFREE 29297947
★☆☆☆☆
Found in Text Mining only
Global developmental delay Developmental Delay CLINVAR_DG
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Hyperglycinemia Nonketotic Hyperglycemia Pubtator 29297947 Associate
★☆☆☆☆
Found in Text Mining only
Leukodystrophy Leukodystrophy BEFREE 29122497, 29297947
★☆☆☆☆
Found in Text Mining only
Leukodystrophy Leukodystrophy HPO_DG
★☆☆☆☆
Found in Text Mining only