Gene Gene information from NCBI Gene database.
Entrez ID 1192
Gene name Chloride intracellular channel 1
Gene symbol CLIC1
Synonyms (NCBI Gene)
CL1C1CLCNL1G6NCC27
Chromosome 6
Chromosome location 6p21.33
Summary Chloride channels are a diverse group of proteins that regulate fundamental cellular processes including stabilization of cell membrane potential, transepithelial transport, maintenance of intracellular pH, and regulation of cell volume. Chloride intracel
miRNA miRNA information provided by mirtarbase database.
186
miRTarBase ID miRNA Experiments Reference
MIRT004124 hsa-miR-192-5p Microarray 16822819
MIRT004186 hsa-miR-197-3p Microarray 16822819
MIRT050364 hsa-miR-25-3p CLASH 23622248
MIRT049437 hsa-miR-92a-3p CLASH 23622248
MIRT046924 hsa-miR-221-3p CLASH 23622248
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
40
GO ID Ontology Definition Evidence Reference
GO:0005254 Function Chloride channel activity IBA
GO:0005254 Function Chloride channel activity IDA 9139710
GO:0005254 Function Chloride channel activity IEA
GO:0005515 Function Protein binding IPI 12163479, 12681486, 14667819, 24338975, 26618866, 28514442, 29924966, 31324722, 32296183, 35156780, 36012204
GO:0005615 Component Extracellular space HDA 22664934
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
602872 2062 ENSG00000213719
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O00299
Protein name Chloride intracellular channel protein 1 (Chloride channel ABP) (Glutaredoxin-like oxidoreductase CLIC1) (EC 1.8.-.-) (Glutathione-dependent dehydroascorbate reductase CLIC1) (EC 1.8.5.1) (Nuclear chloride ion channel 27) (NCC27) (Regulatory nuclear chlor
Protein function In the soluble state, catalyzes glutaredoxin-like thiol disulfide exchange reactions with reduced glutathione as electron donor. Reduces selenite and dehydroascorbate and may act as an antioxidant during oxidative stress response (PubMed:2558102
PDB 1K0M , 1K0N , 1K0O , 1RK4 , 3O3T , 3P8W , 3P90 , 3QR6 , 3SWL , 3TGZ , 3UVH , 4IQA , 4JZQ , 4K0G , 4K0N , 7F8R , 7FBQ
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF13409 GST_N_2 23 87 Glutathione S-transferase, N-terminal domain Domain
PF13410 GST_C_2 123 211 Domain
Tissue specificity TISSUE SPECIFICITY: Expression is prominent in heart, placenta, liver, kidney and pancreas. {ECO:0000269|PubMed:10793131}.
Sequence
Sequence length 241
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
11
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ANXIETY DISORDER GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BREAST NEOPLASMS CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ESOPHAGEAL SQUAMOUS CELL CARCINOMA CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
LIVER CIRRHOSIS, EXPERIMENTAL CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adenocarcinoma Adenocarcinoma BEFREE 27461670
★☆☆☆☆
Found in Text Mining only
Arteriosclerosis Arteriosclerosis BEFREE 27861612, 28970012
★☆☆☆☆
Found in Text Mining only
Arthritis Arthritis Pubtator 34410943 Associate
★☆☆☆☆
Found in Text Mining only
Arthritis Psoriatic Psoriatic arthritis Pubtator 34410943 Associate
★☆☆☆☆
Found in Text Mining only
Arthritis Rheumatoid Rheumatoid arthritis Pubtator 34177888 Associate
★☆☆☆☆
Found in Text Mining only
Atherosclerosis Atherosclerosis BEFREE 27861612, 28970012
★☆☆☆☆
Found in Text Mining only
Atrial Fibrillation Atrial fibrillation Pubtator 39864423 Associate
★☆☆☆☆
Found in Text Mining only
Bile Duct Neoplasms Bile duct neoplasms Pubtator 31106658 Associate
★☆☆☆☆
Found in Text Mining only
Brain Neoplasms Brain Neoplasms BEFREE 30918838
★☆☆☆☆
Found in Text Mining only
Breast Carcinoma Breast Carcinoma CTD_human_DG 20562527
★☆☆☆☆
Found in Text Mining only