Gene Gene information from NCBI Gene database.
Entrez ID 116844
Gene name Leucine rich alpha-2-glycoprotein 1
Gene symbol LRG1
Synonyms (NCBI Gene)
HMFT1766LRG
Chromosome 19
Chromosome location 19p13.3
Summary The leucine-rich repeat (LRR) family of proteins, including LRG1, have been shown to be involved in protein-protein interaction, signal transduction, and cell adhesion and development. LRG1 is expressed during granulocyte differentiation (O`Donnell et al.
miRNA miRNA information provided by mirtarbase database.
100
miRTarBase ID miRNA Experiments Reference
MIRT006448 hsa-miR-335-5p ImmunofluorescenceImmunoprecipitaionLuciferase reporter assayMicroarrayqRT-PCRWestern blot 22382496
MIRT006448 hsa-miR-335-5p ImmunofluorescenceImmunoprecipitaionLuciferase reporter assayMicroarrayqRT-PCRWestern blot 22382496
MIRT006448 hsa-miR-335-5p ImmunofluorescenceImmunoprecipitaionLuciferase reporter assayMicroarrayqRT-PCRWestern blot 22382496
MIRT679358 hsa-miR-122-3p HITS-CLIP 23824327
MIRT679357 hsa-miR-4740-3p HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
40
GO ID Ontology Definition Evidence Reference
GO:0001938 Process Positive regulation of endothelial cell proliferation IEA
GO:0001938 Process Positive regulation of endothelial cell proliferation IMP 23868260
GO:0005114 Function Type II transforming growth factor beta receptor binding IPI 23868260
GO:0005160 Function Transforming growth factor beta receptor binding IEA
GO:0005515 Function Protein binding IPI 23868260, 28514442, 33961781
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
611289 29480 ENSG00000171236
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P02750
Protein name Leucine-rich alpha-2-glycoprotein (LRG)
PDB 7Q4Q , 8H24
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF13855 LRR_8 71 128 Leucine rich repeat Repeat
PF13855 LRR_8 116 176 Leucine rich repeat Repeat
PF13855 LRR_8 168 224 Leucine rich repeat Repeat
PF13855 LRR_8 212 272 Leucine rich repeat Repeat
PF13855 LRR_8 236 285 Leucine rich repeat Repeat
Tissue specificity TISSUE SPECIFICITY: Plasma.
Sequence
MSSWSRQRPKSPGGIQPHVSRTLFLLLLLAASAWGVTLSPKDCQVFRSDHGSSISCQPPA
EIPGYLPADTVHLAVEFFNLTHLPANLLQGASKLQELHLSSNGLESLSPEFLRPVPQLRV
LDLTRNAL
TGLPPGLFQASATLDTLVLKENQLEVLEVSWLHGLKALGHLDLSGNRLRKLP
PGLLANFTLLRTLDLGENQLETLPPDLLRGPLQLERLHLEGNKLQVLGKDLLLPQPDLRY
LFLNGNKLARVAAGAFQGLRQLDMLDLSNNSL
ASVPEGLWASLGQ
PNWDMRDGFDISGNP
WICDQNLSDLYRWLQAQKDKMFSQNDTRCAGPEAVKGQTLLAVAKSQ
Sequence length 347
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Neutrophil degranulation
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
3
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
COLONIC NEOPLASMS CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
KIDNEY FAILURE, ACUTE Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
STEVENS-JOHNSON SYNDROME CTD, Disgenet
CTD, Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adenoma Adenoma BEFREE 28697446, 31784980
★☆☆☆☆
Found in Text Mining only
Adenoma of large intestine Colorectal adenoma BEFREE 28697446
★☆☆☆☆
Found in Text Mining only
Adenomatous Polyposis Coli Multiple polyposis syndrome CTD_human_DG 25200834
★☆☆☆☆
Found in Text Mining only
ANOPHTHALMIA AND PULMONARY HYPOPLASIA Syndromic microphthalmia BEFREE 28376157, 30137376, 30575211, 30760292
★☆☆☆☆
Found in Text Mining only
Aortic Valve Insufficiency Aortic Valve Insufficiency BEFREE 27491861
★☆☆☆☆
Found in Text Mining only
Appendicitis Appendicitis BEFREE 28202345, 30391151
★☆☆☆☆
Found in Text Mining only
Arthritis Arthritis BEFREE 28615031
★☆☆☆☆
Found in Text Mining only
B-Cell Lymphomas B-Cell Lymphoma BEFREE 28376129
★☆☆☆☆
Found in Text Mining only
Bernard Soulier Syndrome Bernard-soulier syndrome Pubtator 7690959 Associate
★☆☆☆☆
Found in Text Mining only
Breast Carcinoma Breast Carcinoma BEFREE 27491861
★☆☆☆☆
Found in Text Mining only