Gene Gene information from NCBI Gene database.
Entrez ID 115362
Gene name Guanylate binding protein 5
Gene symbol GBP5
Synonyms (NCBI Gene)
GBP-5
Chromosome 1
Chromosome location 1p22.2
Summary This gene belongs to the TRAFAC class dynamin-like GTPase superfamily. The encoded protein acts as an activator of NLRP3 inflammasome assembly and has a role in innate immunity and inflammation. Alternative splicing results in multiple transcript variants
miRNA miRNA information provided by mirtarbase database.
236
miRTarBase ID miRNA Experiments Reference
MIRT1014074 hsa-miR-1178 CLIP-seq
MIRT1014075 hsa-miR-147 CLIP-seq
MIRT1014076 hsa-miR-1976 CLIP-seq
MIRT1014077 hsa-miR-370 CLIP-seq
MIRT1014078 hsa-miR-3911 CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
58
GO ID Ontology Definition Evidence Reference
GO:0000139 Component Golgi membrane IDA 31091448
GO:0000139 Component Golgi membrane IEA
GO:0000166 Function Nucleotide binding IEA
GO:0002218 Process Activation of innate immune response IEA
GO:0002376 Process Immune system process IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
611467 19895 ENSG00000154451
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q96PP8
Protein name Guanylate-binding protein 5 (EC 3.6.5.-) (GBP-TA antigen) (GTP-binding protein 5) (GBP-5) (Guanine nucleotide-binding protein 5)
Protein function Interferon (IFN)-inducible GTPase that plays important roles in innate immunity against a diverse range of bacterial, viral and protozoan pathogens (By similarity). Hydrolyzes GTP, but in contrast to other family members, does not produce GMP (P
PDB 7CKF , 7E59 , 7E5A
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02263 GBP 18 280 Guanylate-binding protein, N-terminal domain Domain
PF02841 GBP_C 282 574 Guanylate-binding protein, C-terminal domain Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in peripheral blood monocytes (at protein level). {ECO:0000269|PubMed:15175044}.
Sequence
Sequence length 586
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  NOD-like receptor signaling pathway   Interferon gamma signaling
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
4
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
CELIAC DISEASE CTD, Disgenet
CTD, Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Neurodevelopmental disorder Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
NEURODEVELOPMENTAL DISORDERS Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
TYPE 2 DIABETES MELLITUS GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adenocarcinoma Adenocarcinoma BEFREE 29489025
★☆☆☆☆
Found in Text Mining only
Anhedonia Anhedonia BEFREE 30408130
★☆☆☆☆
Found in Text Mining only
Anhedonia Anhedonia Pubtator 30408130 Associate
★☆☆☆☆
Found in Text Mining only
Carcinoma Hepatocellular Hepatocellular carcinoma Pubtator 33897701, 35637633, 37551111 Associate
★☆☆☆☆
Found in Text Mining only
Carcinoma Medullary Medullary carcinoma Pubtator 26965581 Associate
★☆☆☆☆
Found in Text Mining only
Celiac Disease Celiac disease CTD_human_DG 30097691
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Celiac Disease Celiac disease Pubtator 30097691 Associate
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Colorectal Neoplasms Colorectal neoplasm Pubtator 35213358 Associate
★☆☆☆☆
Found in Text Mining only
Intestinal Diseases Intestinal disease Pubtator 30097691 Associate
★☆☆☆☆
Found in Text Mining only
Lung Diseases Lung disease Pubtator 26025597 Associate
★☆☆☆☆
Found in Text Mining only