Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID	115273
Gene name	RAB42, member RAS oncogene family
Gene symbol	RAB42
Synonyms (NCBI Gene)	-
Chromosome	1
Chromosome location	1p35.3

228

Show/Hide all (228)

miRTarBase ID	miRNA	Experiments	Reference
MIRT682339	hsa-miR-106a-5p	HITS-CLIP	23706177
MIRT682338	hsa-miR-106b-5p	HITS-CLIP	23706177
MIRT682337	hsa-miR-17-5p	HITS-CLIP	23706177
MIRT682336	hsa-miR-20a-5p	HITS-CLIP	23706177
MIRT682335	hsa-miR-20b-5p	HITS-CLIP	23706177
MIRT682334	hsa-miR-519d-3p	HITS-CLIP	23706177
MIRT682333	hsa-miR-526b-3p	HITS-CLIP	23706177
MIRT682332	hsa-miR-93-5p	HITS-CLIP	23706177
MIRT682331	hsa-miR-302a-3p	HITS-CLIP	23706177
MIRT682330	hsa-miR-302b-3p	HITS-CLIP	23706177
MIRT682329	hsa-miR-302c-3p	HITS-CLIP	23706177
MIRT682328	hsa-miR-302d-3p	HITS-CLIP	23706177
MIRT682327	hsa-miR-302e	HITS-CLIP	23706177
MIRT682326	hsa-miR-372-3p	HITS-CLIP	23706177
MIRT682325	hsa-miR-373-3p	HITS-CLIP	23706177
MIRT682324	hsa-miR-520a-3p	HITS-CLIP	23706177
MIRT682323	hsa-miR-520b	HITS-CLIP	23706177
MIRT682322	hsa-miR-520c-3p	HITS-CLIP	23706177
MIRT682321	hsa-miR-520d-3p	HITS-CLIP	23706177
MIRT682320	hsa-miR-520e	HITS-CLIP	23706177
MIRT682319	hsa-miR-4438	HITS-CLIP	23706177
MIRT682318	hsa-miR-512-3p	HITS-CLIP	23706177
MIRT682317	hsa-miR-6504-3p	HITS-CLIP	23706177
MIRT682316	hsa-miR-619-5p	HITS-CLIP	23706177
MIRT682315	hsa-miR-6506-5p	HITS-CLIP	23706177
MIRT682314	hsa-miR-4731-5p	HITS-CLIP	23706177
MIRT682313	hsa-miR-5589-5p	HITS-CLIP	23706177
MIRT682312	hsa-miR-5095	HITS-CLIP	23706177
MIRT682311	hsa-miR-7151-3p	HITS-CLIP	23706177
MIRT516065	hsa-miR-6807-5p	HITS-CLIP	23706177
MIRT682310	hsa-miR-5089-5p	HITS-CLIP	23706177
MIRT516073	hsa-miR-2115-3p	PAR-CLIP	23446348
MIRT516072	hsa-miR-589-3p	PAR-CLIP	23446348
MIRT516071	hsa-miR-6872-3p	PAR-CLIP	23446348
MIRT516070	hsa-miR-3190-5p	PAR-CLIP	23446348
MIRT516069	hsa-miR-1254	PAR-CLIP	23446348
MIRT516068	hsa-miR-3116	PAR-CLIP	23446348
MIRT516067	hsa-miR-661	PAR-CLIP	23446348
MIRT516066	hsa-miR-4529-5p	PAR-CLIP	23446348
MIRT516065	hsa-miR-6807-5p	PAR-CLIP	23446348
MIRT516064	hsa-miR-3187-3p	PAR-CLIP	23446348
MIRT682339	hsa-miR-106a-5p	HITS-CLIP	23706177
MIRT682338	hsa-miR-106b-5p	HITS-CLIP	23706177
MIRT682337	hsa-miR-17-5p	HITS-CLIP	23706177
MIRT682336	hsa-miR-20a-5p	HITS-CLIP	23706177
MIRT682335	hsa-miR-20b-5p	HITS-CLIP	23706177
MIRT682334	hsa-miR-519d-3p	HITS-CLIP	23706177
MIRT682333	hsa-miR-526b-3p	HITS-CLIP	23706177
MIRT682332	hsa-miR-93-5p	HITS-CLIP	23706177
MIRT682331	hsa-miR-302a-3p	HITS-CLIP	23706177
MIRT682330	hsa-miR-302b-3p	HITS-CLIP	23706177
MIRT682329	hsa-miR-302c-3p	HITS-CLIP	23706177
MIRT682328	hsa-miR-302d-3p	HITS-CLIP	23706177
MIRT682327	hsa-miR-302e	HITS-CLIP	23706177
MIRT682326	hsa-miR-372-3p	HITS-CLIP	23706177
MIRT682325	hsa-miR-373-3p	HITS-CLIP	23706177
MIRT682324	hsa-miR-520a-3p	HITS-CLIP	23706177
MIRT682323	hsa-miR-520b	HITS-CLIP	23706177
MIRT682322	hsa-miR-520c-3p	HITS-CLIP	23706177
MIRT682321	hsa-miR-520d-3p	HITS-CLIP	23706177
MIRT682320	hsa-miR-520e	HITS-CLIP	23706177
MIRT682319	hsa-miR-4438	HITS-CLIP	23706177
MIRT682318	hsa-miR-512-3p	HITS-CLIP	23706177
MIRT682317	hsa-miR-6504-3p	HITS-CLIP	23706177
MIRT682316	hsa-miR-619-5p	HITS-CLIP	23706177
MIRT682315	hsa-miR-6506-5p	HITS-CLIP	23706177
MIRT682314	hsa-miR-4731-5p	HITS-CLIP	23706177
MIRT682313	hsa-miR-5589-5p	HITS-CLIP	23706177
MIRT682312	hsa-miR-5095	HITS-CLIP	23706177
MIRT682311	hsa-miR-7151-3p	HITS-CLIP	23706177
MIRT516065	hsa-miR-6807-5p	HITS-CLIP	23706177
MIRT682310	hsa-miR-5089-5p	HITS-CLIP	23706177
MIRT516073	hsa-miR-2115-3p	PAR-CLIP	23446348
MIRT516072	hsa-miR-589-3p	PAR-CLIP	23446348
MIRT516071	hsa-miR-6872-3p	PAR-CLIP	23446348
MIRT516070	hsa-miR-3190-5p	PAR-CLIP	23446348
MIRT516069	hsa-miR-1254	PAR-CLIP	23446348
MIRT516068	hsa-miR-3116	PAR-CLIP	23446348
MIRT516067	hsa-miR-661	PAR-CLIP	23446348
MIRT516066	hsa-miR-4529-5p	PAR-CLIP	23446348
MIRT516065	hsa-miR-6807-5p	PAR-CLIP	23446348
MIRT516064	hsa-miR-3187-3p	PAR-CLIP	23446348
MIRT1284882	hsa-miR-1915	CLIP-seq
MIRT1284883	hsa-miR-216b	CLIP-seq
MIRT1284884	hsa-miR-4726-3p	CLIP-seq
MIRT1284885	hsa-miR-498	CLIP-seq
MIRT1284886	hsa-miR-516b	CLIP-seq
MIRT1284887	hsa-miR-582-3p	CLIP-seq
MIRT2084558	hsa-miR-122	CLIP-seq
MIRT1284882	hsa-miR-1915	CLIP-seq
MIRT2084559	hsa-miR-197	CLIP-seq
MIRT2084560	hsa-miR-1976	CLIP-seq
MIRT1284883	hsa-miR-216b	CLIP-seq
MIRT2084561	hsa-miR-24	CLIP-seq
MIRT2084562	hsa-miR-3135b	CLIP-seq
MIRT2084563	hsa-miR-3149	CLIP-seq
MIRT2084564	hsa-miR-3189-3p	CLIP-seq
MIRT2084565	hsa-miR-3652	CLIP-seq
MIRT2084566	hsa-miR-411	CLIP-seq
MIRT2084567	hsa-miR-4279	CLIP-seq
MIRT2084568	hsa-miR-4284	CLIP-seq
MIRT2084569	hsa-miR-4430	CLIP-seq
MIRT2084570	hsa-miR-4716-5p	CLIP-seq
MIRT2084571	hsa-miR-4722-3p	CLIP-seq
MIRT1284884	hsa-miR-4726-3p	CLIP-seq
MIRT2084572	hsa-miR-4735-5p	CLIP-seq
MIRT2084573	hsa-miR-4757-5p	CLIP-seq
MIRT2084574	hsa-miR-4775	CLIP-seq
MIRT2084575	hsa-miR-4781-3p	CLIP-seq
MIRT2084576	hsa-miR-4794	CLIP-seq
MIRT1284885	hsa-miR-498	CLIP-seq
MIRT2084577	hsa-miR-501-3p	CLIP-seq
MIRT2084578	hsa-miR-502-3p	CLIP-seq
MIRT2084579	hsa-miR-5096	CLIP-seq
MIRT2084580	hsa-miR-590-3p	CLIP-seq
MIRT2084581	hsa-miR-767-5p	CLIP-seq
MIRT2084558	hsa-miR-122	CLIP-seq
MIRT1284883	hsa-miR-216b	CLIP-seq
MIRT2084561	hsa-miR-24	CLIP-seq
MIRT2084562	hsa-miR-3135b	CLIP-seq
MIRT2084563	hsa-miR-3149	CLIP-seq
MIRT2084565	hsa-miR-3652	CLIP-seq
MIRT2084568	hsa-miR-4284	CLIP-seq
MIRT2309792	hsa-miR-4423-5p	CLIP-seq
MIRT2084569	hsa-miR-4430	CLIP-seq
MIRT2084572	hsa-miR-4735-5p	CLIP-seq
MIRT2084574	hsa-miR-4775	CLIP-seq
MIRT2084576	hsa-miR-4794	CLIP-seq
MIRT2084577	hsa-miR-501-3p	CLIP-seq
MIRT2084578	hsa-miR-502-3p	CLIP-seq
MIRT2084580	hsa-miR-590-3p	CLIP-seq
MIRT2084581	hsa-miR-767-5p	CLIP-seq
MIRT2084558	hsa-miR-122	CLIP-seq
MIRT1284882	hsa-miR-1915	CLIP-seq
MIRT2084559	hsa-miR-197	CLIP-seq
MIRT2084560	hsa-miR-1976	CLIP-seq
MIRT1284883	hsa-miR-216b	CLIP-seq
MIRT2084562	hsa-miR-3135b	CLIP-seq
MIRT2084563	hsa-miR-3149	CLIP-seq
MIRT2084565	hsa-miR-3652	CLIP-seq
MIRT2084566	hsa-miR-411	CLIP-seq
MIRT2084567	hsa-miR-4279	CLIP-seq
MIRT2309792	hsa-miR-4423-5p	CLIP-seq
MIRT2084569	hsa-miR-4430	CLIP-seq
MIRT2457640	hsa-miR-4435	CLIP-seq
MIRT2457641	hsa-miR-4701-5p	CLIP-seq
MIRT2084570	hsa-miR-4716-5p	CLIP-seq
MIRT2084571	hsa-miR-4722-3p	CLIP-seq
MIRT1284884	hsa-miR-4726-3p	CLIP-seq
MIRT2084572	hsa-miR-4735-5p	CLIP-seq
MIRT2457642	hsa-miR-4755-3p	CLIP-seq
MIRT2084574	hsa-miR-4775	CLIP-seq
MIRT2084575	hsa-miR-4781-3p	CLIP-seq
MIRT2084576	hsa-miR-4794	CLIP-seq
MIRT1284885	hsa-miR-498	CLIP-seq
MIRT2084577	hsa-miR-501-3p	CLIP-seq
MIRT2084578	hsa-miR-502-3p	CLIP-seq
MIRT2084579	hsa-miR-5096	CLIP-seq
MIRT2457643	hsa-miR-548s	CLIP-seq
MIRT2457644	hsa-miR-588	CLIP-seq
MIRT2084580	hsa-miR-590-3p	CLIP-seq
MIRT2084581	hsa-miR-767-5p	CLIP-seq
MIRT2084558	hsa-miR-122	CLIP-seq
MIRT1284882	hsa-miR-1915	CLIP-seq
MIRT2084559	hsa-miR-197	CLIP-seq
MIRT2084560	hsa-miR-1976	CLIP-seq
MIRT1284883	hsa-miR-216b	CLIP-seq
MIRT2084561	hsa-miR-24	CLIP-seq
MIRT2084562	hsa-miR-3135b	CLIP-seq
MIRT2084563	hsa-miR-3149	CLIP-seq
MIRT2084565	hsa-miR-3652	CLIP-seq
MIRT2606383	hsa-miR-3663-5p	CLIP-seq
MIRT2084566	hsa-miR-411	CLIP-seq
MIRT2084567	hsa-miR-4279	CLIP-seq
MIRT2084568	hsa-miR-4284	CLIP-seq
MIRT2309792	hsa-miR-4423-5p	CLIP-seq
MIRT2084569	hsa-miR-4430	CLIP-seq
MIRT2457640	hsa-miR-4435	CLIP-seq
MIRT2457641	hsa-miR-4701-5p	CLIP-seq
MIRT2084570	hsa-miR-4716-5p	CLIP-seq
MIRT2084571	hsa-miR-4722-3p	CLIP-seq
MIRT1284884	hsa-miR-4726-3p	CLIP-seq
MIRT2084572	hsa-miR-4735-5p	CLIP-seq
MIRT2457642	hsa-miR-4755-3p	CLIP-seq
MIRT2084574	hsa-miR-4775	CLIP-seq
MIRT2084575	hsa-miR-4781-3p	CLIP-seq
MIRT2084576	hsa-miR-4794	CLIP-seq
MIRT1284885	hsa-miR-498	CLIP-seq
MIRT2084577	hsa-miR-501-3p	CLIP-seq
MIRT2084578	hsa-miR-502-3p	CLIP-seq
MIRT2084579	hsa-miR-5096	CLIP-seq
MIRT2457643	hsa-miR-548s	CLIP-seq
MIRT2457644	hsa-miR-588	CLIP-seq
MIRT2084580	hsa-miR-590-3p	CLIP-seq
MIRT2084581	hsa-miR-767-5p	CLIP-seq
MIRT2084558	hsa-miR-122	CLIP-seq
MIRT1284882	hsa-miR-1915	CLIP-seq
MIRT2084559	hsa-miR-197	CLIP-seq
MIRT2084560	hsa-miR-1976	CLIP-seq
MIRT1284883	hsa-miR-216b	CLIP-seq
MIRT2084561	hsa-miR-24	CLIP-seq
MIRT2084562	hsa-miR-3135b	CLIP-seq
MIRT2084563	hsa-miR-3149	CLIP-seq
MIRT2084565	hsa-miR-3652	CLIP-seq
MIRT2606383	hsa-miR-3663-5p	CLIP-seq
MIRT2084566	hsa-miR-411	CLIP-seq
MIRT2084567	hsa-miR-4279	CLIP-seq
MIRT2084568	hsa-miR-4284	CLIP-seq
MIRT2309792	hsa-miR-4423-5p	CLIP-seq
MIRT2084569	hsa-miR-4430	CLIP-seq
MIRT2457640	hsa-miR-4435	CLIP-seq
MIRT2457641	hsa-miR-4701-5p	CLIP-seq
MIRT2084570	hsa-miR-4716-5p	CLIP-seq
MIRT2084571	hsa-miR-4722-3p	CLIP-seq
MIRT1284884	hsa-miR-4726-3p	CLIP-seq
MIRT2084572	hsa-miR-4735-5p	CLIP-seq
MIRT2457642	hsa-miR-4755-3p	CLIP-seq
MIRT2084574	hsa-miR-4775	CLIP-seq
MIRT2084575	hsa-miR-4781-3p	CLIP-seq
MIRT2084576	hsa-miR-4794	CLIP-seq
MIRT1284885	hsa-miR-498	CLIP-seq
MIRT2084577	hsa-miR-501-3p	CLIP-seq
MIRT2084578	hsa-miR-502-3p	CLIP-seq
MIRT2084579	hsa-miR-5096	CLIP-seq
MIRT2457643	hsa-miR-548s	CLIP-seq
MIRT2457644	hsa-miR-588	CLIP-seq
MIRT2084580	hsa-miR-590-3p	CLIP-seq
MIRT2084581	hsa-miR-767-5p	CLIP-seq

Show/Hide all (11)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000166	Function	Nucleotide binding	IEA
GO:0003924	Function	GTPase activity	IBA
GO:0003924	Function	GTPase activity	IEA
GO:0005515	Function	Protein binding	IPI	32296183
GO:0005525	Function	GTP binding	IBA
GO:0005525	Function	GTP binding	IEA
GO:0005886	Component	Plasma membrane	IBA
GO:0016020	Component	Membrane	IEA
GO:0016787	Function	Hydrolase activity	IEA
GO:0019003	Function	GDP binding	IBA
GO:0046872	Function	Metal ion binding	IEA

MIM	HGNC	e!Ensembl
HGNC	N/A	HGNC

Q8N4Z0

Protein name

Ras-related protein Rab-42 (EC 3.6.5.2)

Protein function

The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to r

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF00071	Ras	11 → 179	Ras family	Domain

Sequence

MEAEGCRYQFRVALLGDAAVGKTSLLRSYVAGAPGAPEPEPEPEPTVGAECYRRALQLRA
GPRVKLQLWDTAGHERFRCITRSFYRNVVGVLLVFDVTNRKSFEHIQDWHQEVMATQGPD
KVIFLLVGHKSDLQSTRCVSAQEAEELAASLGMAFVETSVKNNCNVDLAFDTLADAIQQA
LQQGDIKLEEGWGGVRLIHKTQIPRSPSRKQHSGPCQC

Sequence length

218

Interactions

View interactions

	Reactome
			RAB geranylgeranylation

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Unknown Diseases (1)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
AUTISTIC DISORDER	—	Disgenet	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Show/Hide Text Mining Associations (2)

Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Associations from Text Mining Disease associations identified through text mining
Glioma	Glioma	BEFREE	30762207		★★★★★ ★☆☆☆☆ Found in Text Mining only
Glioma	Glioma	Pubtator	37698534	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only

RAB42 (RAB42, member RAS oncogene family)