Gene Gene information from NCBI Gene database.
Entrez ID 1144
Gene name Cholinergic receptor nicotinic delta subunit
Gene symbol CHRND
Synonyms (NCBI Gene)
ACHRDCMS2ACMS3ACMS3BCMS3CFCCMSSCCMS
Chromosome 2
Chromosome location 2q37.1
Summary The acetylcholine receptor of muscle has 5 subunits of 4 different types: 2 alpha and 1 each of beta, gamma and delta subunits. After acetylcholine binding, the receptor undergoes an extensive conformation change that affects all subunits and leads to ope
SNPs SNP information provided by dbSNP.
27
SNP ID Visualize variation Clinical significance Consequence
rs41265127 C>G Likely-benign, benign, conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
rs55868108 C>T Pathogenic, uncertain-significance Coding sequence variant, missense variant, 5 prime UTR variant
rs114463490 C>A,T Conflicting-interpretations-of-pathogenicity, uncertain-significance Synonymous variant, coding sequence variant, missense variant
rs121909502 C>T Pathogenic Coding sequence variant, missense variant
rs121909503 C>A,T Pathogenic Intron variant, coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
10
miRTarBase ID miRNA Experiments Reference
MIRT892096 hsa-miR-1266 CLIP-seq
MIRT892097 hsa-miR-3127-5p CLIP-seq
MIRT892098 hsa-miR-3918 CLIP-seq
MIRT892099 hsa-miR-4455 CLIP-seq
MIRT892100 hsa-miR-4481 CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
54
GO ID Ontology Definition Evidence Reference
GO:0003009 Process Skeletal muscle contraction IBA
GO:0003009 Process Skeletal muscle contraction IEA
GO:0004888 Function Transmembrane signaling receptor activity IEA
GO:0005216 Function Monoatomic ion channel activity IEA
GO:0005230 Function Extracellular ligand-gated monoatomic ion channel activity IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
100720 1965 ENSG00000135902
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q07001
Protein name Acetylcholine receptor subunit delta
Protein function After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02931 Neur_chan_LBD 25 246 Neurotransmitter-gated ion-channel ligand binding domain Family
PF02932 Neur_chan_memb 253 489 Neurotransmitter-gated ion-channel transmembrane region Family
Sequence
Sequence length 517
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Neuroactive ligand-receptor interaction   Highly sodium permeable postsynaptic acetylcholine nicotinic receptors
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
29
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Arthrogryposis multiplex congenita Likely pathogenic rs1574630583 RCV000855459
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Breathing dysregulation Likely pathogenic rs1057518958, rs1057518957 RCV000415166
RCV000414846
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
CHRND-related disorder Likely pathogenic; Pathogenic rs776218605, rs375623674 RCV005407835
RCV005871053
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Congenital myasthenic syndrome 3A Likely pathogenic; Pathogenic rs121909502, rs121909505, rs55868108 RCV000020031
RCV005409603
RCV001332575
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Autosomal recessive multiple pterygium syndrome Conflicting classifications of pathogenicity; Benign; Likely benign; Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BLEPHAROPTOSIS Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Centronuclear myopathy Conflicting classifications of pathogenicity ClinVar
Disgenet
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
Congenital myasthenic syndrome Benign; Conflicting classifications of pathogenicity; Likely benign; Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Akinesia Akinesia HPO_DG
★☆☆☆☆
Found in Text Mining only
Aplasia of muscle Aplasia Of Muscle HPO_DG
★☆☆☆☆
Found in Text Mining only
Blepharoptosis Ptosis CLINVAR_DG
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Blepharoptosis Ptosis HPO_DG
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Byzanthine arch palate High palate HPO_DG
★☆☆☆☆
Found in Text Mining only
Congenital Epicanthus Congenital Epicanthus HPO_DG
★☆☆☆☆
Found in Text Mining only
Congenital hypoplasia of lung Pulmonary hypoplasia HPO_DG
★☆☆☆☆
Found in Text Mining only
Congenital Myasthenic Syndromes, Postsynaptic Myasthenic Syndrome CTD_human_DG
★☆☆☆☆
Found in Text Mining only
Congenital Myasthenic Syndromes, Presynaptic Myasthenic Syndrome CTD_human_DG
★☆☆☆☆
Found in Text Mining only
Deglutition Disorders Dysphagia HPO_DG
★☆☆☆☆
Found in Text Mining only