Gene Gene information from NCBI Gene database.
Entrez ID 113612
Gene name Cytochrome P450 family 2 subfamily U member 1
Gene symbol CYP2U1
Synonyms (NCBI Gene)
P450TECSPG49SPG56
Chromosome 4
Chromosome location 4q25
Summary This gene encodes a member of the cytochrome P450 superfamily of enzymes. The cytochrome P450 proteins are monooxygenases which catalyze many reactions involved in drug metabolism and synthesis of cholesterol, steroids and other lipids. This enzyme is a h
miRNA miRNA information provided by mirtarbase database.
172
miRTarBase ID miRNA Experiments Reference
MIRT019811 hsa-miR-375 Microarray 20215506
MIRT020782 hsa-miR-155-5p Reporter assay;Other 20584899
MIRT022645 hsa-miR-124-3p Microarray 18668037
MIRT031184 hsa-miR-19b-3p Sequencing 20371350
MIRT647217 hsa-miR-500a-5p HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
30
GO ID Ontology Definition Evidence Reference
GO:0004497 Function Monooxygenase activity IEA
GO:0004497 Function Monooxygenase activity TAS
GO:0005506 Function Iron ion binding IEA
GO:0005737 Component Cytoplasm IBA
GO:0005739 Component Mitochondrion IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
610670 20582 ENSG00000155016
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q7Z449
Protein name Cytochrome P450 2U1 (Long-chain fatty acid omega-monooxygenase) (EC 1.14.14.80)
Protein function A cytochrome P450 monooxygenase involved in the metabolism of arachidonic acid and its conjugates (PubMed:14660610, PubMed:24563460). Mechanistically, uses molecular oxygen inserting one oxygen atom into a substrate, and reducing the second into
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00067 p450 101 541 Cytochrome P450 Domain
Tissue specificity TISSUE SPECIFICITY: Widely expressed with stronger expression in thymus, heart and cerebellum. {ECO:0000269|PubMed:14660610, ECO:0000269|PubMed:14975754, ECO:0000269|PubMed:15752708}.
Sequence
Sequence length 544
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Fatty acid degradation
Arachidonic acid metabolism
Metabolic pathways
  Miscellaneous substrates
Synthesis of (16-20)-hydroxyeicosatetraenoic acids (HETE)
Defective CYP2U1 causes Spastic paraplegia 56, autosomal recessive (SPG56)
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
21
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Abnormality of the nervous system Likely pathogenic rs2126199263 RCV001814380
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
CYP2U1-related disorder Pathogenic; Likely pathogenic rs767024102, rs397514513, rs759033144 RCV004751565
RCV004751232
RCV003420263
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Global developmental delay Likely pathogenic; Pathogenic rs397514513 RCV000162142
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Hereditary spastic paraplegia Likely pathogenic; Pathogenic rs766889023, rs781551534, rs141431913 RCV001847253
RCV001848371
RCV001847627
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
AUTISM SPECTRUM DISORDER CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTISM SPECTRUM DISORDERS Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTOSOMAL RECESSIVE SPASTIC PARAPLEGIA TYPE 56 Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CONGENITAL NEUROLOGIC ANOMALIES Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Agenesis of corpus callosum Agenesis Of Corpus Callosum BEFREE 26556829
★☆☆☆☆
Found in Text Mining only
Aicardi Goutieres syndrome Aicardi goutieres syndrome Pubtator 23176821 Associate
★☆☆☆☆
Found in Text Mining only
Ataxia Ataxia Pubtator 24337409 Associate
★☆☆☆☆
Found in Text Mining only
Autosomal recessive spastic paraplegia type 56 Spastic Paraplegia Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Breast Carcinoma Breast Carcinoma BEFREE 30651572
★☆☆☆☆
Found in Text Mining only
Choroidal Neovascularization Choroidal neovascularization Pubtator 34828401 Associate
★☆☆☆☆
Found in Text Mining only
Clumsiness - motor delay Motor delay HPO_DG
★☆☆☆☆
Found in Text Mining only
Disorder of macula of retina Disorder Of Macula Of Retina BEFREE 26914923
★☆☆☆☆
Found in Text Mining only
Dystonia Dystonia Pubtator 27292318 Associate
★☆☆☆☆
Found in Text Mining only
Dystonia 18 Dystonia Pubtator 27292318 Associate
★☆☆☆☆
Found in Text Mining only