Gene Gene information from NCBI Gene database.
Entrez ID 11337
Gene name GABA type A receptor-associated protein
Gene symbol GABARAP
Synonyms (NCBI Gene)
ATG8AGABARAP-aMM46
Chromosome 17
Chromosome location 17p13.1
Summary Gamma-aminobutyric acid A receptors [GABA(A) receptors] are ligand-gated chloride channels that mediate inhibitory neurotransmission. This gene encodes GABA(A) receptor-associated protein, which is highly positively charged in its N-terminus and shares se
miRNA miRNA information provided by mirtarbase database.
226
miRTarBase ID miRNA Experiments Reference
MIRT029885 hsa-miR-26b-5p Microarray 19088304
MIRT459644 hsa-miR-4484 PAR-CLIP 23592263
MIRT459643 hsa-miR-3120-3p PAR-CLIP 23592263
MIRT459642 hsa-miR-888-3p PAR-CLIP 23592263
MIRT459641 hsa-miR-4499 PAR-CLIP 23592263
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
51
GO ID Ontology Definition Evidence Reference
GO:0000045 Process Autophagosome assembly IBA
GO:0000139 Component Golgi membrane IEA
GO:0000226 Process Microtubule cytoskeleton organization IEA
GO:0000421 Component Autophagosome membrane IBA
GO:0000421 Component Autophagosome membrane IDA 15169837
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
605125 4067 ENSG00000170296
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O95166
Protein name Gamma-aminobutyric acid receptor-associated protein (GABA(A) receptor-associated protein) (MM46)
Protein function Ubiquitin-like modifier that plays a role in intracellular transport of GABA(A) receptors and its interaction with the cytoskeleton (PubMed:9892355). Involved in autophagy: while LC3s are involved in elongation of the phagophore membrane, the GA
PDB 1GNU , 1KLV , 1KM7 , 1KOT , 3D32 , 3DOW , 3WIM , 4XC2 , 5DPS , 6HB9 , 6HOG , 6HOH , 6HOJ , 6HOK , 6HYL , 6HYM , 6HYN , 6HYO , 6YOP , 7AA8 , 7BRQ , 7BRT , 7BRU , 7BV4 , 7EA7 , 7LSW , 7LT6 , 7VEC , 7VED , 7YO9 , 7ZKR , 7ZL7 , 8AFI , 8S1M , 8T2M , 8T2N , 8T31 , 8T32 , 8T33 , 8W6A
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02991 Atg8 13 116 Autophagy protein Atg8 ubiquitin like Domain
Tissue specificity TISSUE SPECIFICITY: Heart, brain, placenta, liver, skeletal muscle, kidney and pancreas. {ECO:0000269|PubMed:11146101, ECO:0000269|PubMed:9892355}.
Sequence
Sequence length 117
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  FoxO signaling pathway
Autophagy - other
Mitophagy - animal
Autophagy - animal
NOD-like receptor signaling pathway
GABAergic synapse
  Macroautophagy
TBC/RABGAPs
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
1
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
SCHIZOPHRENIA Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Alzheimer Disease Alzheimer disease Pubtator 22691495, 33218044 Associate
★☆☆☆☆
Found in Text Mining only
Angelman Syndrome Angelman syndrome Pubtator 18477280 Associate
★☆☆☆☆
Found in Text Mining only
Anxiety Disorders Anxiety disorder Pubtator 19842164 Associate
★☆☆☆☆
Found in Text Mining only
Autistic Disorder Autism Pubtator 16556609, 21901839 Associate
★☆☆☆☆
Found in Text Mining only
Bipolar Disorder Bipolar disorder Pubtator 28117838 Associate
★☆☆☆☆
Found in Text Mining only
Breast Carcinoma Breast Carcinoma BEFREE 15695379, 26474850
★☆☆☆☆
Found in Text Mining only
Breast Neoplasms Breast neoplasm Pubtator 26474850 Associate
★☆☆☆☆
Found in Text Mining only
Carcinogenesis Carcinogenesis Pubtator 19381877, 23617850 Associate
★☆☆☆☆
Found in Text Mining only
Carcinoma Hepatocellular Hepatocellular carcinoma Pubtator 35054896 Associate
★☆☆☆☆
Found in Text Mining only
Carcinoma Pancreatic Ductal Pancreatic ductal carcinoma Pubtator 37701987 Associate
★☆☆☆☆
Found in Text Mining only