Gene Gene information from NCBI Gene database.
Entrez ID 11093
Gene name ADAM metallopeptidase with thrombospondin type 1 motif 13
Gene symbol ADAMTS13
Synonyms (NCBI Gene)
ADAM-TS13ADAMTS-13C9orf8VWFCPvWF-CP
Chromosome 9
Chromosome location 9q34.2
Summary This gene encodes a member of a family of proteins containing several distinct regions, including a metalloproteinase domain, a disintegrin-like domain, and a thrombospondin type 1 (TS) motif. The enzyme encoded by this gene specifically cleaves von Wille
SNPs SNP information provided by dbSNP.
38
SNP ID Visualize variation Clinical significance Consequence
rs2301612 C>A,G Pathogenic, benign Missense variant, coding sequence variant, intron variant, non coding transcript variant
rs36220240 C>T Likely-benign, likely-pathogenic Non coding transcript variant, intron variant, coding sequence variant, missense variant, synonymous variant
rs121908467 C>G Pathogenic Non coding transcript variant, genic upstream transcript variant, 5 prime UTR variant, coding sequence variant, upstream transcript variant, missense variant
rs121908468 T>G Pathogenic Coding sequence variant, non coding transcript variant, missense variant, genic downstream transcript variant
rs121908469 C>A,T Pathogenic Non coding transcript variant, genic upstream transcript variant, 5 prime UTR variant, coding sequence variant, upstream transcript variant, missense variant
miRNA miRNA information provided by mirtarbase database.
499
miRTarBase ID miRNA Experiments Reference
MIRT610473 hsa-miR-181c-3p HITS-CLIP 19536157
MIRT610472 hsa-miR-6511a-3p HITS-CLIP 19536157
MIRT610471 hsa-miR-6511b-3p HITS-CLIP 19536157
MIRT610470 hsa-miR-1538 HITS-CLIP 19536157
MIRT610469 hsa-miR-4745-3p HITS-CLIP 19536157
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
47
GO ID Ontology Definition Evidence Reference
GO:0004175 Function Endopeptidase activity IEA
GO:0004222 Function Metalloendopeptidase activity EXP 12775718, 18983500, 31439947
GO:0004222 Function Metalloendopeptidase activity IBA
GO:0004222 Function Metalloendopeptidase activity IEA
GO:0004222 Function Metalloendopeptidase activity TAS
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
604134 1366 ENSG00000160323
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q76LX8
Protein name A disintegrin and metalloproteinase with thrombospondin motifs 13 (ADAM-TS 13) (ADAM-TS13) (ADAMTS-13) (EC 3.4.24.87) (von Willebrand factor-cleaving protease) (vWF-CP) (vWF-cleaving protease)
Protein function Cleaves the vWF multimers in plasma into smaller forms thereby controlling vWF-mediated platelet thrombus formation.
PDB 3GHM , 3GHN , 3VN4 , 6QIG , 7B01
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01421 Reprolysin 81 286 Reprolysin (M12B) family zinc metalloprotease Domain
PF17771 ADAM_CR_2 301 372 ADAM cysteine-rich domain Domain
PF00090 TSP_1 388 438 Thrombospondin type 1 domain Domain
PF19030 TSP1_ADAMTS 746 804 Domain
PF19030 TSP1_ADAMTS 955 1012 Domain
PF19030 TSP1_ADAMTS 1016 1072 Domain
PF19030 TSP1_ADAMTS 1076 1130 Domain
Tissue specificity TISSUE SPECIFICITY: Plasma. Expressed primarily in liver. {ECO:0000269|PubMed:11574066}.
Sequence
MHQRHPRARCPPLCVAGILACGFLLGCWGPSHFQQSCLQALEPQAVSSYLSPGAPLKGRP
PSPGFQRQRQRQRRAAGGILHLELLVAVGPDVFQAHQEDTERYVLTNLNIGAELLRDPSL
GAQFRVHLVKMVILTEPEGAPNITANLTSSLLSVCGWSQTINPEDDTDPGHADLVLYITR
FDLELPDGNRQVRGVTQLGGACSPTWSCLITEDTGFDLGVTIAHEIGHSFGLEHDGAPGS
GCGPSGHVMASDGAAPRAGLAWSPCSRRQLLSLLSAGRARCVWDPP
RPQPGSAGHPPDAQ
PGLYYSANEQCRVAFGPKAVACTFAREHLDMCQALSCHTDPLDQSSCSRLLVPLLDGTEC
GVEKWCSKGRCR
SLVELTPIAAVHGRWSSWGPRSPCSRSCGGGVVTRRRQCNNPRPAFGG
RACVGADLQAEMCNTQAC
EKTQLEFMSQQCARTDGQPLRSSPGGASFYHWGAAVPHSQGD
ALCRHMCRAIGESFIMKRGDSFLDGTRCMPSGPREDGTLSLCVSGSCRTFGCDGRMDSQQ
VWDRCQVCGGDNSTCSPRKGSFTAGRAREYVTFLTVTPNLTSVYIANHRPLFTHLAVRIG
GRYVVAGKMSISPNTTYPSLLEDGRVEYRVALTEDRLPRLEEIRIWGPLQEDADIQVYRR
YGEEYGNLTRPDITFTYFQPKPRQAWVWAAVRGPCSVSCGAGLRWVNYSCLDQARKELVE
TVQCQGSQQPPAWPEACVLEPCPPYWAVGDFGPCSASCGGGLRERPVRCVEAQGSLLKTL
PPARCRAGAQQPAVALETCNPQPC
PARWEVSEPSSCTSAGGAGLALENETCVPGADGLEA
PVTEGPGSVDEKLPAPEPCVGMSCPPGWGHLDATSAGEKAPSPWGSIRTGAQAAHVWTPA
AGSCSVSCGRGLMELRFLCMDSALRVPVQEELCGLASKPGSRREVCQAVPCPARWQYKLA
ACSVSCGRGVVRRILYCARAHGEDDGEEILLDTQCQGLPRPEPQEACSLEPC
PPRWKVMS
LGPCSASCGLGTARRSVACVQLDQGQDVEVDEAACAALVRPEASVPCLIADC
TYRWHVGT
WMECSVSCGDGIQRRRDTCLGPQAQAPVPADFCQHLPKPVTVRGCWAGPC
VGQGTPSLVP
HEEAAAPGRTTATPAGASLEWSQARGLLFSPAPQPRRLLPGPQENSVQSSACGRQHLEPT
GTIDMRGPGQADCAVAIGRPLGEVVTLRVLESSLNCSAGDMLLLWGRLTWRKMCRKLLDM
TFSSKTNTLVVRQRCGRPGGGVLLRYGSQLAPETFYRECDMQLFGPWGEIVSPSLSPATS
NAGGCRLFINVAPHARIAIHALATNMGAGTEGANASYILIRDTHSLRTTAFHGQQVLYWE
SESSQAEMEFSEGFLKAQASLRGQYWTLQSWVPEMQDPQSWKGKEGT
Sequence length 1427
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Platelet activation   Defective B3GALTL causes Peters-plus syndrome (PpS)
O-glycosylation of TSR domain-containing proteins
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
29
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Abnormal bleeding Pathogenic rs748223519 RCV001270504
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
ADAMTS13-related disorder Likely pathogenic; Pathogenic rs1564422441, rs782242503, rs2491124231, rs2491164601, rs142572218, rs281875287 RCV003399196
RCV003402848
RCV003394368
RCV003427824
RCV003952487
View all (1 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Thrombocytopenia Pathogenic rs748223519 RCV001270504
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Thrombotic thrombocytopenic purpura Pathogenic; Likely pathogenic rs2491349636, rs121908470, rs121908472, rs2491047604, rs2491103284, rs1554791280, rs281875299, rs142572218 RCV004700837
RCV006268071
RCV004700192
RCV003493333
RCV004587743
View all (3 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ATYPICAL HEMOLYTIC UREMIC SYNDROME Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Atypical hemolytic-uremic syndrome Conflicting classifications of pathogenicity; Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CARCINOMA, HEPATOCELLULAR CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cervical cancer Benign; Conflicting classifications of pathogenicity; Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute Kidney Insufficiency Acute Kidney Insufficiency BEFREE 26342041
★☆☆☆☆
Found in Text Mining only
Acute lymphocytic leukemia Lymphocytic Leukemia BEFREE 28207543
★☆☆☆☆
Found in Text Mining only
Acute pancreatitis Pancreatitis BEFREE 31493291
★☆☆☆☆
Found in Text Mining only
Acute Promyelocytic Leukemia Promyelocytic Leukemia BEFREE 30234545
★☆☆☆☆
Found in Text Mining only
Adult Acute Lymphocytic Leukemia Lymphocytic Leukemia BEFREE 28207543
★☆☆☆☆
Found in Text Mining only
Alzheimer disease, familial, type 3 Alzheimer disease BEFREE 29972862
★☆☆☆☆
Found in Text Mining only
Androgen-Insensitivity Syndrome Androgen-Insensitivity Syndrome BEFREE 23225307
★☆☆☆☆
Found in Text Mining only
Anemia Anemia BEFREE 19786614
★☆☆☆☆
Found in Text Mining only
Anemia Anemia Pubtator 19786614, 32496441 Associate
★☆☆☆☆
Found in Text Mining only
Anemia Hemolytic Hemolytic anemia Pubtator 12393505, 32197596 Associate
★☆☆☆☆
Found in Text Mining only