Gene Gene information from NCBI Gene database.
Entrez ID 10913
Gene name Ectodysplasin A receptor
Gene symbol EDAR
Synonyms (NCBI Gene)
DLECTD10AECTD10BED1RED3ED5EDA-A1REDA1REDA3HRM1
Chromosome 2
Chromosome location 2q13
Summary This gene encodes a member of the tumor necrosis factor receptor family. The encoded transmembrane protein is a receptor for the soluble ligand ectodysplasin A, and can activate the nuclear factor-kappaB, JNK, and caspase-independent cell death pathways.
SNPs SNP information provided by dbSNP.
37
SNP ID Visualize variation Clinical significance Consequence
rs121908450 C>T Pathogenic Coding sequence variant, missense variant
rs121908452 G>A Pathogenic Stop gained, coding sequence variant
rs121908453 C>T Pathogenic, pathogenic-likely-pathogenic Coding sequence variant, missense variant
rs121908454 C>T Pathogenic Coding sequence variant, missense variant
rs121908455 T>G Pathogenic Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
112
miRTarBase ID miRNA Experiments Reference
MIRT498249 hsa-miR-5197-5p PAR-CLIP 22291592
MIRT498248 hsa-miR-3665 PAR-CLIP 22291592
MIRT498247 hsa-miR-185-5p PAR-CLIP 22291592
MIRT498246 hsa-miR-4306 PAR-CLIP 22291592
MIRT498245 hsa-miR-4644 PAR-CLIP 22291592
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
27
GO ID Ontology Definition Evidence Reference
GO:0001942 Process Hair follicle development IEA
GO:0004888 Function Transmembrane signaling receptor activity IDA 11039935
GO:0004888 Function Transmembrane signaling receptor activity NAS 10431241
GO:0005515 Function Protein binding IPI 11039935, 27144394, 32296183
GO:0005886 Component Plasma membrane IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
604095 2895 ENSG00000135960
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9UNE0
Protein name Tumor necrosis factor receptor superfamily member EDAR (Anhidrotic ectodysplasin receptor 1) (Downless homolog) (EDA-A1 receptor) (Ectodermal dysplasia receptor) (Ectodysplasin-A receptor)
Protein function Receptor for EDA isoform A1, but not for EDA isoform A2. Mediates the activation of NF-kappa-B and JNK. May promote caspase-independent cell death.
PDB 7X9G
Family and domains
Tissue specificity TISSUE SPECIFICITY: Detected in fetal kidney, lung, skin and cultured neonatal epidermal keratinocytes. Not detected in lymphoblast and fibroblast cell lines.
Sequence
MAHVGDCTQTPWLPVLVVSLMCSARAEYSNCGENEYYNQTTGLCQECPPCGPGEEPYLSC
GYGTKDEDYGCVPCPAEKFSKGGYQICRRHKDCEGFFRATVLTPGDMENDAECGPCLPGY
YMLENRPRNIYGMVCYSCLLAPPNTKECVGATSGASANFPGTSGSSTLSPFQHAHKELSG
QGHLATALIIAMSTIFIMAIAIVLIIMFYILKTKPSAPACCTSHPGKSVEAQVSKDEEKK
EAPDNVVMFSEKDEFEKLTATPAKPTKSENDASSENEQLLSRSVDSDEEPAPDKQGSPEL
CLLSLVHLAREKSATSNKSAGIQSRRKKILDVYANVCGVVEGLSPTELPFDCLEKTSRML
SSTYNSEKAVVKTWRHLAESFGLKRDEIGGMTDGMQLFDRISTAGYSIPELLTKLVQIER
LDAVESLCADILEWAGVVPPASQPHAAS
Sequence length 448
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Cytokine-cytokine receptor interaction
NF-kappa B signaling pathway
  TNFs bind their physiological receptors
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
33
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Autosomal recessive hypohidrotic ectodermal dysplasia syndrome Likely pathogenic; Pathogenic rs1696610650, rs1696805635, rs2105390253, rs2105371772, rs2105371643, rs1696608635, rs1696608702, rs2470612697, rs747806672, rs773132518, rs1696610832, rs121908450, rs121908452, rs121908453, rs2470612633
View all (24 more)
RCV001337468
RCV001346616
RCV001389203
RCV002000044
RCV001896839
View all (37 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Ectodermal dysplasia Likely pathogenic; Pathogenic rs1558814967, rs797044437, rs1553445945, rs1475705727 RCV006252551
RCV001729338
RCV000613299
RCV001729830
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Ectodermal dysplasia 10A, hypohidrotic/hair/nail type, autosomal dominant Likely pathogenic; Pathogenic rs1696610650, rs1696805635, rs2105390253, rs2105371772, rs2105371643, rs1696608635, rs1696608702, rs2470612697, rs747806672, rs773132518, rs1696610832, rs121908450, rs121908452, rs121908453, rs2470612633
View all (28 more)
RCV001337468
RCV001346616
RCV001389203
RCV002000044
RCV001896839
View all (41 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Ectodermal dysplasia 10a, hypohidrotic/hair/tooth type, autosomal dominant Likely pathogenic; Pathogenic rs121908450, rs121908452, rs121908453, rs121908456 RCV000032598
RCV000006210
RCV000006211
RCV000006215
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ALZHEIMER DISEASE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ANDROGENETIC ALOPECIA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTOSOMAL DOMINANT HYPOHIDROTIC ECTODERMAL DYSPLASIA GenCC, Orphanet
GenCC, Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTOSOMAL DOMINANT HYPOHIDROTIC ECTODERMAL DYSPLASIA SYNDROME Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adenocarcinoma of lung (disorder) Lung adenocarcinoma BEFREE 29246834
★☆☆☆☆
Found in Text Mining only
Alopecia Alopecia HPO_DG
★☆☆☆☆
Found in Text Mining only
Alopecia, Androgenetic, 1 Androgenetic Alopecia GWASCAT_DG 27182965
★☆☆☆☆
Found in Text Mining only
Alopecia, Androgenetic, 2 Androgenetic Alopecia GWASCAT_DG 27182965
★☆☆☆☆
Found in Text Mining only
Alopecia, Androgenetic, 3 Androgenetic Alopecia GWASCAT_DG 27182965
★☆☆☆☆
Found in Text Mining only
Alopecia, Male Pattern Alopecia, Male Pattern GWASCAT_DG 27182965
★☆☆☆☆
Found in Text Mining only
Alpers Syndrome (disorder) Alpers Syndrome CLINVAR_DG
★☆☆☆☆
Found in Text Mining only
Amyloidosis Amyloidosis BEFREE 27834776
★☆☆☆☆
Found in Text Mining only
Androgenetic Alopecia Androgenetic Alopecia GWASCAT_DG 27182965
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Anhidrosis Anhidrosis HPO_DG
★☆☆☆☆
Found in Text Mining only