Gene Gene information from NCBI Gene database.
Entrez ID 10516
Gene name Fibulin 5
Gene symbol FBLN5
Synonyms (NCBI Gene)
ADCL2ARCL1AARMD3CMT1HDANCEEVECFIBL-5HNARMDUP50
Chromosome 14
Chromosome location 14q32.12
Summary The protein encoded by this gene is a secreted, extracellular matrix protein containing an Arg-Gly-Asp (RGD) motif and calcium-binding EGF-like domains. It promotes adhesion of endothelial cells through interaction of integrins and the RGD motif. It is pr
SNPs SNP information provided by dbSNP.
16
SNP ID Visualize variation Clinical significance Consequence
rs28939072 A>G Pathogenic Coding sequence variant, missense variant
rs28939370 A>G Pathogenic Coding sequence variant, missense variant
rs61734479 C>T Likely-benign, conflicting-interpretations-of-pathogenicity, pathogenic, uncertain-significance Coding sequence variant, missense variant
rs80338765 C>T Pathogenic, uncertain-significance, likely-benign Missense variant, coding sequence variant
rs80338766 A>G Pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
124
miRTarBase ID miRNA Experiments Reference
MIRT006770 hsa-miR-200c-3p Luciferase reporter assay 22685266
MIRT006770 hsa-miR-200c-3p Luciferase reporter assayWestern blot 22569286
MIRT018518 hsa-miR-335-5p Microarray 18185580
MIRT029864 hsa-miR-26b-5p Microarray 19088304
MIRT460762 hsa-miR-3120-3p PAR-CLIP 23592263
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
37
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IEA
GO:0005178 Function Integrin binding IEA
GO:0005178 Function Integrin binding ISS
GO:0005178 Function Integrin binding TAS 10428823
GO:0005509 Function Calcium ion binding IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
604580 3602 ENSG00000140092
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9UBX5
Protein name Fibulin-5 (FIBL-5) (Developmental arteries and neural crest EGF-like protein) (Dance) (Urine p50 protein) (UP50)
Protein function Essential for elastic fiber formation, is involved in the assembly of continuous elastin (ELN) polymer and promotes the interaction of microfibrils and ELN (PubMed:18185537). Stabilizes and organizes elastic fibers in the skin, lung and vasculat
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF07645 EGF_CA 42 84 Calcium-binding EGF domain Domain
PF07645 EGF_CA 127 166 Calcium-binding EGF domain Domain
PF12662 cEGF 187 210 Complement Clr-like EGF-like Domain
PF12662 cEGF 268 291 Complement Clr-like EGF-like Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in skin fibroblasts (at protein level) (PubMed:17035250). Expressed predominantly in heart, ovary, and colon but also in kidney, pancreas, testis, lung and placenta. Not detectable in brain, liver, thymus, prostate, or periph
Sequence
MPGIKRILTVTILALCLPSPGNAQAQCTNGFDLDRQSGQCLDIDECRTIPEACRGDMMCV
NQNGGYLCIPRTNPVYRGPYSNPY
STPYSGPYPAAAPPLSAPNYPTISRPLICRFGYQMD
ESNQCVDVDECATDSHQCNPTQICINTEGGYTCSCTDGYWLLEGQCLDIDECRYGYCQQL
CANVPGSYSCTCNPGFTLNEDGRSCQDVNECATENPCVQTCVNTYGSFICRCDPGYELEE
DGVHCSDMDECSFSEFLCQHECVNQPGTYFCSCPPGYILLDDNRSCQDINECEHRNHTCN
LQQTCYNLQGGFKCIDPIRCEEPYLRISDNRCMCPAENPGCRDQPFTILYRDMDVVSGRS
VPADIFQMQATTRYPGAYYIFQIKSGNEGREFYMRQTGPISATLVMTRPIKGPREIQLDL
EMITVNTVINFRGSSVIRLRIYVSQYPF
Sequence length 448
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Elastic fibre formation
Molecules associated with elastic fibres
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
47
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Charcot-Marie-Tooth disease, demyelinating, IIA 1H Pathogenic; Likely pathogenic rs1172268284, rs864309526, rs2056032001 RCV001843339
RCV001843302
RCV003990457
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Cutis laxa, autosomal dominant Likely pathogenic rs2139960687 RCV003447324
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Cutis laxa, autosomal dominant 2 Pathogenic rs1595286986 RCV000850551
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Cutis laxa, autosomal recessive, type 1A Pathogenic rs1595286986, rs746506432 RCV000850551
RCV001290131
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Age related macular degeneration 1 Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Age-related macular degeneration Uncertain significance; Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTOSOMAL DOMINANT CUTIS LAXA CTD, Orphanet
CTD, Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Autosomal recessive cutis laxa type 1 Uncertain significance ClinVar
CTD, Orphanet
CTD, Orphanet
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Age related macular degeneration Age-related macular degeneration BEFREE 15269314, 16652333, 19617354, 20007835, 20599547, 21576112, 26694911
★☆☆☆☆
Found in Text Mining only
Age related macular degeneration Age-related macular degeneration GENOMICS_ENGLAND_DG
★☆☆☆☆
Found in Text Mining only
Aortic Aneurysm Aortic Aneurysm BEFREE 31489966
★☆☆☆☆
Found in Text Mining only
Aortic Aneurysm Aortic Aneurysm HPO_DG
★☆☆☆☆
Found in Text Mining only
Aortic Aneurysm, Abdominal Aortic Aneurysm BEFREE 20133342, 27089918
★☆☆☆☆
Found in Text Mining only
Arachnodactyly Arachnodactyly HPO_DG
★☆☆☆☆
Found in Text Mining only
Atherosclerosis Atherosclerosis Pubtator 19948975 Associate
★☆☆☆☆
Found in Text Mining only
Autosomal dominant cutis laxa Cutis Laxa Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Autosomal recessive cutis laxa type 1 Cutis Laxa Orphanet
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
BASAL LAMINAR DRUSEN (disorder) Basal Laminar Drusen BEFREE 16652333, 26694911, 27007659
★☆☆☆☆
Found in Text Mining only