Gene Gene information from NCBI Gene database.
Entrez ID 10092
Gene name Actin related protein 2/3 complex subunit 5
Gene symbol ARPC5
Synonyms (NCBI Gene)
ARC16IMD113dJ127C7.3p16-Arc
Chromosome 1
Chromosome location 1q25.3
Summary This gene encodes one of seven subunits of the human Arp2/3 protein complex. The Arp2/3 protein complex has been implicated in the control of actin polymerization in cells and has been conserved through evolution. The exact role of the protein encoded by
miRNA miRNA information provided by mirtarbase database.
394
miRTarBase ID miRNA Experiments Reference
MIRT004981 hsa-miR-31-5p Luciferase reporter assayqRT-PCR 19524507
MIRT006195 hsa-miR-22-3p ImmunohistochemistryLuciferase reporter assayqRT-PCRWestern blot 22447776
MIRT006195 hsa-miR-22-3p ImmunohistochemistryLuciferase reporter assayqRT-PCRWestern blot 22447776
MIRT006195 hsa-miR-22-3p EMSALuciferase reporter assayMicroarrayqRT-PCRWestern blot 22447776
MIRT006195 hsa-miR-22-3p ImmunohistochemistryLuciferase reporter assayqRT-PCRWestern blot 22447776
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
35
GO ID Ontology Definition Evidence Reference
GO:0003779 Function Actin binding IEA
GO:0005200 Function Structural constituent of cytoskeleton IDA 11741539
GO:0005200 Function Structural constituent of cytoskeleton TAS 9230079
GO:0005515 Function Protein binding IPI 11162547
GO:0005576 Component Extracellular region TAS
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
604227 708 ENSG00000162704
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O15511
Protein name Actin-related protein 2/3 complex subunit 5 (Arp2/3 complex 16 kDa subunit) (p16-ARC)
Protein function Component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF) (PubMed:9230079). The Arp2/3 complex mediates the formation of branched actin networks in the cytopl
PDB 6UHC , 6YW7
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF04699 P16-Arc 10 151 ARP2/3 complex 16 kDa subunit (p16-Arc) Domain
Sequence
Sequence length 151
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Endocytosis
Tight junction
Fc gamma R-mediated phagocytosis
Regulation of actin cytoskeleton
Bacterial invasion of epithelial cells
Pathogenic Escherichia coli infection
Shigellosis
Salmonella infection
Yersinia infection
  Regulation of actin dynamics for phagocytic cup formation
EPHB-mediated forward signaling
RHO GTPases Activate WASPs and WAVEs
Neutrophil degranulation
Clathrin-mediated endocytosis
FCGR3A-mediated phagocytosis
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
1
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Immunodeficiency 113 with autoimmunity and autoinflammation Pathogenic rs1287691422, rs2528118860 RCV003444098
RCV003444099
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Atrial Fibrillation Atrial fibrillation Pubtator 36653368 Associate
★☆☆☆☆
Found in Text Mining only
Carcinoma Hepatocellular Hepatocellular carcinoma Pubtator 36148220 Associate
★☆☆☆☆
Found in Text Mining only
Glioma Glioma Pubtator 37789267 Associate
★☆☆☆☆
Found in Text Mining only
Malignant Neoplasms Malignant Neoplasm BEFREE 22378351
★☆☆☆☆
Found in Text Mining only
Melanoma Melanoma Pubtator 34468072 Associate
★☆☆☆☆
Found in Text Mining only
Multiple Myeloma Multiple myeloma BEFREE 30201948
★☆☆☆☆
Found in Text Mining only
Multiple Myeloma Multiple myeloma Pubtator 30201948, 37231521 Associate
★☆☆☆☆
Found in Text Mining only
Periodontal Diseases Periodontal Diseases BEFREE 29610270
★☆☆☆☆
Found in Text Mining only
Periodontal Diseases Periodontal disease Pubtator 29610270 Associate
★☆☆☆☆
Found in Text Mining only
Rhabdomyosarcoma Rhabdomyosarcoma BEFREE 20956521
★☆☆☆☆
Found in Text Mining only