MSANTD3-TMEFF1 (MSANTD3-TMEFF1 readthrough)

Gene

• Entrez ID: 100526694
• Gene name: MSANTD3-TMEFF1 readthrough
• Gene symbol: MSANTD3-TMEFF1
• Synonyms (NCBI Gene): C9orf2, C9orf3-TMEFF1, C9orf30-TMEFF1, H7365, TMEFF1, TR-1
• Chromosome: 9
• Chromosome location: 9q31.1
• Summary: This locus represents naturally occurring read-through transcription from the neighboring MSANTD3 (Myb/SANT-like DNA-binding domain containing 3) and TMEFF1 (transmembrane protein with EGF-like and two follistatin-like domains 1) genes. The read-through t

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT720781	hsa-miR-548c-3p	HITS-CLIP	19536157
MIRT720780	hsa-miR-495-3p	HITS-CLIP	19536157
MIRT720779	hsa-miR-5688	HITS-CLIP	19536157
MIRT720778	hsa-miR-1250-3p	HITS-CLIP	19536157
MIRT720777	hsa-miR-302b-5p	HITS-CLIP	19536157
MIRT720776	hsa-miR-302d-5p	HITS-CLIP	19536157
MIRT720781	hsa-miR-548c-3p	HITS-CLIP	19536157
MIRT720780	hsa-miR-495-3p	HITS-CLIP	19536157
MIRT720779	hsa-miR-5688	HITS-CLIP	19536157
MIRT720778	hsa-miR-1250-3p	HITS-CLIP	19536157
MIRT720777	hsa-miR-302b-5p	HITS-CLIP	19536157
MIRT720776	hsa-miR-302d-5p	HITS-CLIP	19536157

Other IDs

• MIM: HGNC
• HGNC: 38838
• e!Ensembl: N/A

Interactions View interactions

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Evidence Score
PERIPHERAL ARTERIAL DISEASE	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
SQUAMOUS CELL LUNG CARCINOMA	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Associations from Text Mining
Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Autoimmune Diseases	Autoimmune disease	Pubtator	37652509	Inhibit	★☆☆☆☆ Found in Text Mining only
Brain Neoplasms	Brain Neoplasms	BEFREE	12743596, 30697076		★☆☆☆☆ Found in Text Mining only
Brain Neoplasms	Brain Neoplasms	LHGDN	12743596		★☆☆☆☆ Found in Text Mining only
Breast Neoplasms	Breast neoplasm	Pubtator	16407223	Associate	★☆☆☆☆ Found in Text Mining only
Carcinoma, Ovarian Epithelial	Ovarian Epithelial carcinoma	BEFREE	30697076		★☆☆☆☆ Found in Text Mining only
Epithelial ovarian cancer	Ovarian cancer	BEFREE	30697076		★☆☆☆☆ Found in Text Mining only
Hepatitis C Chronic	Hepatitis c	Pubtator	19624566	Associate	★☆☆☆☆ Found in Text Mining only
Kidney Neoplasms	Kidney neoplasm	Pubtator	16407223	Associate	★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of brain	Brain Neoplasms	BEFREE	12743596		★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of breast	Breast Cancer	BEFREE	22748014		★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of testis	Malignant Neoplasm Of Testis	BEFREE	31218705		★☆☆☆☆ Found in Text Mining only
Malignant Neoplasms	Malignant Neoplasm	BEFREE	12743596		★☆☆☆☆ Found in Text Mining only
Melanoma	Melanoma	Pubtator	28378637	Associate	★☆☆☆☆ Found in Text Mining only
Merkel cell carcinoma	Merkel cell carcinoma	BEFREE	31218705		★☆☆☆☆ Found in Text Mining only
Neoplasms	Neoplasms	BEFREE	12743596		★☆☆☆☆ Found in Text Mining only