Gene Gene information from NCBI Gene database.
Entrez ID 100
Gene name Adenosine deaminase
Gene symbol ADA
Synonyms (NCBI Gene)
ADA1
Chromosome 20
Chromosome location 20q13.12
Summary This gene encodes an enzyme that catalyzes the hydrolysis of adenosine to inosine in the purine catabolic pathway. Various mutations have been described for this gene and have been linked to human diseases related to impaired immune function such as sever
SNPs SNP information provided by dbSNP.
60
SNP ID Visualize variation Clinical significance Consequence
rs45557242 C>T Conflicting-interpretations-of-pathogenicity, benign Coding sequence variant, non coding transcript variant, synonymous variant, 5 prime UTR variant
rs61732239 C>G,T Conflicting-interpretations-of-pathogenicity Coding sequence variant, non coding transcript variant, missense variant, intron variant
rs73598374 C>A,G,T Benign-likely-benign, pathogenic, benign Coding sequence variant, non coding transcript variant, missense variant, 5 prime UTR variant
rs79281338 C>A,T Pathogenic-likely-pathogenic Coding sequence variant, non coding transcript variant, missense variant
rs114025668 C>T Uncertain-significance, pathogenic Coding sequence variant, non coding transcript variant, missense variant, intron variant
miRNA miRNA information provided by mirtarbase database.
100
miRTarBase ID miRNA Experiments Reference
MIRT027685 hsa-miR-98-5p Microarray 19088304
MIRT041891 hsa-miR-484 CLASH 23622248
MIRT438367 hsa-miR-140-5p Luciferase reporter assayWestern blot 24530397
MIRT438367 hsa-miR-140-5p Luciferase reporter assayWestern blot 24530397
MIRT438367 hsa-miR-140-5p Luciferase reporter assayWestern blot 24530397
Transcription factors Transcription factors information provided by TRRUST V2 database.
1
Transcription factor Regulation Reference
SP1 Unknown 8127716
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
111
GO ID Ontology Definition Evidence Reference
GO:0000255 Process Allantoin metabolic process IEA
GO:0001666 Process Response to hypoxia IDA 16670267
GO:0001701 Process In utero embryonic development IEA
GO:0001829 Process Trophectodermal cell differentiation IEA
GO:0001889 Process Liver development IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
608958 186 ENSG00000196839
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P00813
Protein name Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase)
Protein function Catalyzes the hydrolytic deamination of adenosine and 2-deoxyadenosine (PubMed:16670267, PubMed:23193172, PubMed:26166670, PubMed:8452534, PubMed:9361033). Plays an important role in purine metabolism and in adenosine homeostasis. Modulates sign
PDB 3IAR , 7RTG
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00962 A_deaminase 8 346 Adenosine/AMP deaminase Domain
Tissue specificity TISSUE SPECIFICITY: Found in all tissues, occurs in large amounts in T-lymphocytes (PubMed:20959412). Expressed at the time of weaning in gastrointestinal tissues. {ECO:0000269|PubMed:20959412}.
Sequence
Sequence length 363
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Purine metabolism
Metabolic pathways
Nucleotide metabolism
Primary immunodeficiency
  Purine salvage
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
23
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
ADA-related disorder Likely pathogenic; Pathogenic rs199422327, rs121908715, rs121908723, rs778809577, rs886041796, rs780014431 RCV004752678
RCV003944791
RCV003904795
RCV003403304
RCV004752966
View all (1 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
SCID due to ADA deficiency, delayed onset Likely pathogenic; Pathogenic rs1194494050, rs121908722 RCV000002049
RCV000002061
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Severe combined immunodeficiency disease Likely pathogenic; Pathogenic rs758073965, rs2123508053, rs121908714, rs121908739, rs121908735, rs121908721, rs199422328, rs121908722, rs746052951, rs761242509, rs751635016, rs886041796, rs780014431, rs778343059, rs1312320956
View all (5 more)
RCV003120597
RCV003230683
RCV003234887
RCV001731270
RCV000780816
View all (17 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-negative, due to adenosine deaminase deficiency Likely pathogenic; Pathogenic rs121908722, rs1363043396, rs759445496, rs1199690825, rs758073965, rs1419063255, rs587776534, rs2123508053, rs2065345592, rs2123517868, rs2123517896, rs2065327638, rs121908718, rs121908731, rs2145318314
View all (114 more)
RCV001379577
RCV001378051
RCV001390080
RCV001381316
RCV001388454
View all (142 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Adenosine deaminase 2 allozyme Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Adrenocortical carcinoma, hereditary Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ASTHMA Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTISM SPECTRUM DISORDER CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute lymphocytic leukemia Lymphocytic Leukemia BEFREE 1053696, 30581348, 31282760, 6309282
★☆☆☆☆
Found in Text Mining only
Acute Undifferentiated Leukemia Leukemia BEFREE 6607471
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma BEFREE 29854023
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of lung (disorder) Lung adenocarcinoma BEFREE 28928239, 30921217
★☆☆☆☆
Found in Text Mining only
Adenosine deaminase deficiency Adenosine Deaminase Deficiency BEFREE 1061119, 10720488, 11067872, 11223861, 12456496, 16651028, 17181544, 18597656, 21142972, 24972650, 27763769, 28319446, 29744787, 3007108, 3469459
View all (12 more)
★☆☆☆☆
Found in Text Mining only
Adenosine deaminase deficiency Adenosine Deaminase Deficiency ORPHANET_DG
★☆☆☆☆
Found in Text Mining only
Adult Acute Lymphocytic Leukemia Lymphocytic Leukemia BEFREE 30581348
★☆☆☆☆
Found in Text Mining only
Alopecia Alopecia HPO_DG
★☆☆☆☆
Found in Text Mining only
Amyotrophic Lateral Sclerosis Amyotrophic Lateral Sclerosis BEFREE 18971634, 20372915, 20424386, 24115583, 24355598, 28045133, 29944911, 30698736, 30945056
★☆☆☆☆
Found in Text Mining only
Anemia Anemia HPO_DG
★☆☆☆☆
Found in Text Mining only