Pathways column key: KEGG Reactome

Disease Term	Disease ID	Gene Symbol	Classification	References	Source	Pathways
INFLAMMATORY BOWEL DISEASE	EFO_0003767 MONDO:0005265	SP140	Unknown	21102463 23128233 26192919 28067908 36077729 37156999	GWAS catalog	—
		SPATA31H1	Unknown	37262302	GWAS catalog	—
		SPATC1	Unknown	37156999	GWAS catalog	—
		SPATS2L	Unknown	38154582	GWAS catalog	—
		SPDEF	Unknown	27569725	GWAS catalog	—
		SPMIP7	Unknown	18587394 21102463 23128233 26192919 28067908 37156999 37262302 37523193 38616254	GWAS catalog	—
		SPRED2	Unknown	37156999	GWAS catalog	Regulation of RAS by GAPs FGFRL1 modulation of FGFR1 signaling RAS signaling downstream of NF1 loss-of-function variants
		SPRY4	Unknown	37262302	GWAS catalog	—
		ST7	Unknown	23128233 28067908	GWAS catalog	—
		STAT3	Unknown	18587394 23128233 23266558 26192919 26278503 27569725 28067908 37156999 37523193 39792054	GWAS catalog	EGFR tyrosine kinase inhibitor resistance Chemokine signaling pathway HIF-1 signaling pathway +53 more
		STAT4	Unknown	23128233 26192919	GWAS catalog	Necroptosis JAK-STAT signaling pathway Th1 and Th2 cell differentiation +9 more
		STAT5A	Unknown	39792054	GWAS catalog	ErbB signaling pathway Hormone signaling Necroptosis +28 more
		STAT5B	Unknown	37262302	GWAS catalog	ErbB signaling pathway Chemokine signaling pathway Hormone signaling +28 more
		STIMATE	Unknown	38154582	GWAS catalog	—
		STIMATE-MUSTN1	Unknown	38154582	GWAS catalog	—
		STK10	Unknown	37156999	GWAS catalog	Progesterone-mediated oocyte maturation Neutrophil degranulation
		STMN3	Unknown	39792054	GWAS catalog	—
		SUFU	Unknown	26192919	GWAS catalog	Hedgehog signaling pathway Pathways in cancer Basal cell carcinoma +4 more
		SULF1	Unknown	32581322	GWAS catalog	—
		SULT1A1	Unknown	38616254 39792054	GWAS catalog	Chemical carcinogenesis - DNA adducts Cytosolic sulfonation of small molecules
		SYNGAP1	Unknown	37377963	GWAS catalog	Ras signaling pathway Regulation of RAS by GAPs
		SYNGR1	Unknown	26192919 39792054	GWAS catalog	Neutrophil degranulation
		SYVN1	Unknown	32581322	GWAS catalog	Ubiquitin mediated proteolysis Protein processing in endoplasmic reticulum XBP1(S) activates chaperone genes +3 more
		TAB2	Unknown	26192919 37156999	GWAS catalog	MAPK signaling pathway NF-kappa B signaling pathway Osteoclast differentiation +33 more
		TAGAP	Unknown	21102463 23128233 26192919 28067908 37156999	GWAS catalog	Rho GTPase cycle
		TAP2	Unknown	37377963	GWAS catalog	ABC transporters Phagosome Antigen processing and presentation +7 more
		TC2N	Unknown	35232999	GWAS catalog	—
		TCERG1L	Unknown	22412388	GWAS catalog	—
		TEAD1	Unknown	38102678	GWAS catalog	Hippo signaling pathway Hippo signaling pathway - multiple species YAP1- and WWTR1 (TAZ)-stimulated gene expression +2 more
		TET2	Unknown	26192919 37156999	GWAS catalog	—
		TEX48	Unknown	23266558	GWAS catalog	—
		TGFBR2	Unknown	37156999	GWAS catalog	MAPK signaling pathway Cytokine-cytokine receptor interaction FoxO signaling pathway +28 more
		TGFBR3	Unknown	37156999	GWAS catalog	—
		THADA	Unknown	21102463 23128233 26192919 28067908 37156999 38102678 39792054	GWAS catalog	tRNA modification in the nucleus and cytosol
		THEMIS	Unknown	23128233 26192919 28067908 37156999	GWAS catalog	—
		THSD7A	Unknown	32581322 38154582	GWAS catalog	Defective B3GALTL causes Peters-plus syndrome (PpS) O-glycosylation of TSR domain-containing proteins
		TIMD4	Unknown	37156999	GWAS catalog	Efferocytosis
		TLR4	Unknown	31083239 31442584 32042729 37156999	GWAS catalog, GenCC	NF-kappa B signaling pathway HIF-1 signaling pathway Phagosome +41 more
		TM9SF4	Unknown	23128233 28067908	GWAS catalog	—
		TMBIM1	Unknown	23128233 26192919 28067908	GWAS catalog	Neutrophil degranulation
		TMEM106B	Unknown	32581322	GWAS catalog	—
		TMEM117	Unknown	27569725	GWAS catalog	—
		TMEM151B	Unknown	37156999	GWAS catalog	—
		TMEM170A	Unknown	37156999	GWAS catalog	—
		TMEM174	Unknown	21102463 23128233 26192919 28067908 37156999 37262302	GWAS catalog	—
		TMEM258	Unknown	21102463 26192919 37156999	GWAS catalog	N-Glycan biosynthesis Various types of N-glycan biosynthesis Protein processing in endoplasmic reticulum
		TNF	Unknown	21102463 37262302 37377963	GWAS catalog	Antifolate resistance MAPK signaling pathway Cytokine-cytokine receptor interaction +72 more
		TNFRSF14	Unknown	26192919 28067908 37156999	GWAS catalog	Virion - Herpesvirus Cytokine-cytokine receptor interaction Viral protein interaction with cytokine and cytokine receptor +3 more
		TNFRSF6B	Unknown	26192919 28067908 37156999	GWAS catalog	Cytokine-cytokine receptor interaction TNFs bind their physiological receptors
		TNFSF15	Unknown	18587394 18758464 21102463 23128233 23266558 26192919 26891255 30500874 32581322 35512355 37156999 37523193 39792054	GWAS catalog	Cytokine-cytokine receptor interaction TNFs bind their physiological receptors
INFLAMMATORY BOWEL DISEASES	C0021390 MESH:D015212	TNF	Unknown	15086448 27793764	CTD, Disgenet	Antifolate resistance MAPK signaling pathway Cytokine-cytokine receptor interaction +72 more
INFLAMMATORY BOWEL DISEASES	C0021390 MESH:D015212	TNFSF15	Unknown	26192919	CTD, Disgenet	Cytokine-cytokine receptor interaction TNFs bind their physiological receptors

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