TJP2 (tight junction protein 2)
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Gene
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Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
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9414 |
Gene nameGene Name - the full gene name approved by the HGNC.
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Tight junction protein 2 |
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
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TJP2 |
SynonymsGene synonyms aliases
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C9DUPq21.11, DFNA51, DUP9q21.11, FHCA1, PFIC4, X104, ZO2 |
ChromosomeChromosome number
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9 |
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
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9q21.11 |
SummarySummary of gene provided in NCBI Entrez Gene.
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This gene encodes a zonula occluden that is a member of the membrane-associated guanylate kinase homolog family. The encoded protein functions as a component of the tight junction barrier in epithelial and endothelial cells and is necessary for proper ass |
SNPsSNP information provided by dbSNP.
|
SNP ID |
Visualize variation |
Clinical significance |
Consequence |
rs121918299 |
T>C |
Pathogenic |
Coding sequence variant, missense variant |
rs138241615 |
C>T |
Conflicting-interpretations-of-pathogenicity, likely-benign |
Coding sequence variant, missense variant |
rs138509345 |
C>A,T |
Conflicting-interpretations-of-pathogenicity |
Coding sequence variant, synonymous variant |
rs139314808 |
G>A |
Pathogenic |
Coding sequence variant, missense variant |
rs141496493 |
C>G,T |
Conflicting-interpretations-of-pathogenicity |
Coding sequence variant, missense variant |
rs149911553 |
C>G,T |
Conflicting-interpretations-of-pathogenicity, likely-benign, uncertain-significance |
Missense variant, coding sequence variant |
rs184519036 |
C>T |
Conflicting-interpretations-of-pathogenicity |
Coding sequence variant, synonymous variant, intron variant |
rs191634088 |
G>A,C |
Conflicting-interpretations-of-pathogenicity |
Coding sequence variant, synonymous variant, intron variant |
rs199641113 |
C>T |
Conflicting-interpretations-of-pathogenicity |
Missense variant, coding sequence variant |
rs200222645 |
G>A |
Conflicting-interpretations-of-pathogenicity |
Missense variant, coding sequence variant |
rs200415824 |
A>T |
Conflicting-interpretations-of-pathogenicity, likely-benign |
Intron variant |
rs530810462 |
C>G,T |
Conflicting-interpretations-of-pathogenicity |
Synonymous variant, coding sequence variant |
rs587777518 |
GCCT>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs587777519 |
C>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs587777520 |
C>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs587777521 |
A>G |
Pathogenic |
Splice acceptor variant |
rs745427593 |
G>A |
Likely-benign, conflicting-interpretations-of-pathogenicity |
Synonymous variant, coding sequence variant |
rs746830415 |
C>T |
Pathogenic |
Stop gained, coding sequence variant |
rs748671901 |
C>T |
Pathogenic |
Stop gained, coding sequence variant |
rs749009273 |
C>T |
Pathogenic |
Stop gained, coding sequence variant, intron variant |
rs750625862 |
G>T |
Conflicting-interpretations-of-pathogenicity |
Coding sequence variant, synonymous variant |
rs764379398 |
C>A,G,T |
Pathogenic |
Coding sequence variant, synonymous variant, missense variant, stop gained |
rs771690686 |
A>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs776869985 |
T>-,TT |
Pathogenic |
Coding sequence variant, frameshift variant |
rs777460754 |
C>G,T |
Pathogenic |
Coding sequence variant, missense variant, stop gained |
rs781334233 |
->G |
Pathogenic |
Coding sequence variant, frameshift variant |
rs786205659 |
G>- |
Likely-pathogenic |
Coding sequence variant, frameshift variant |
rs864321695 |
G>T |
Pathogenic |
Intron variant, splice acceptor variant |
rs864321697 |
G>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs886041948 |
->CCTCA |
Likely-pathogenic, pathogenic |
Coding sequence variant, frameshift variant |
rs886042381 |
T>A |
Pathogenic |
Coding sequence variant, stop gained |
rs928915940 |
C>T |
Pathogenic, uncertain-significance |
Coding sequence variant, stop gained |
rs1057518679 |
T>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs1060499649 |
G>A |
Likely-pathogenic |
Coding sequence variant, missense variant |
rs1182781290 |
C>G,T |
Pathogenic |
Stop gained, coding sequence variant, missense variant |
rs1251192873 |
C>G,T |
Pathogenic |
Missense variant, coding sequence variant, stop gained |
rs1278244243 |
T>C |
Likely-pathogenic |
Splice donor variant |
rs1554660803 |
CG>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs1554662952 |
C>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs1554664852 |
G>T |
Pathogenic |
Splice donor variant |
rs1554667607 |
C>T |
Likely-pathogenic |
Coding sequence variant, stop gained |
rs1563915664 |
->A |
Pathogenic |
Coding sequence variant, frameshift variant |
rs1563948951 |
C>T |
Pathogenic |
Coding sequence variant, stop gained |
rs1588080674 |
A>C |
Pathogenic |
Splice acceptor variant |
rs1588080680 |
G>A |
Pathogenic |
Splice acceptor variant |
rs1588081022 |
T>G |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs1588117076 |
T>C |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs1588127136 |
G>A |
Pathogenic |
Splice acceptor variant |
rs1588135086 |
T>G |
Likely-pathogenic |
Intron variant |
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miRNAmiRNA information provided by mirtarbase database.
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Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
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Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
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Protein
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UniProt ID |
Q9UDY2 |
Protein name |
Tight junction protein 2 (Tight junction protein ZO-2) (Zona occludens protein 2) (Zonula occludens protein 2) |
Protein function |
Plays a role in tight junctions and adherens junctions (By similarity). Acts as a positive regulator of RANKL-induced osteoclast differentiation, potentially via mediating downstream transcriptional activity (By similarity). {ECO:0000250|UniProt |
PDB |
2OSG
,
3E17
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Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF00595 |
PDZ |
33 → 117 |
PDZ domain |
Domain |
PF00595 |
PDZ |
298 → 382 |
PDZ domain |
Domain |
PF00595 |
PDZ |
510 → 589 |
PDZ domain |
Domain |
PF07653 |
SH3_2 |
608 → 667 |
Variant SH3 domain |
Domain |
PF00625 |
Guanylate_kin |
767 → 878 |
Guanylate kinase |
Domain |
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Sequence |
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Sequence length |
1190 |
Interactions |
View interactions |
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
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Associated diseases
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Causal |
Disease name |
Disease term |
dbSNP ID |
References |
Cholestasis |
Cholestasis, progressive familial intrahepatic 4 |
rs121909103, rs751511532, rs376368459, rs762702807, rs1578490102, rs1578499691, rs1578504946, rs1317656688, rs199791850, rs1452792080, rs1578491039 |
24614073, 24752540 |
Hypercholanemia |
Hypercholanemia, Familial, Familial hypercholanemia |
rs121918299, rs587777520, rs928915940 |
12704386, 24752540 |
Intrahepatic cholestasis |
Intrahepatic Cholestasis, Progressive familial intrahepatic cholestasis type 4 |
rs121918299, rs80338722, rs80338725, rs80338719, rs80338723, rs80338726, rs72549401, rs11568372, rs1553469602, rs387907317, rs387906354, rs752919965, rs72549397, rs111033609, rs121909099, rs387906381, rs121909100, rs121909101, rs121909104, rs121909105, rs387906526, rs121918440, rs387906527, rs72552778, rs387906529, rs121918443, rs72552780, rs80338724, rs80338715, rs80338727, rs80338729, rs80338716, rs80338717, rs398122839, rs515726137, rs587777519, rs587777520, rs587777521, rs879255644, rs113090017, rs864321695, rs776869985, rs864321697, rs80338720, rs746155190, rs879255504, rs886041948, rs886042562, rs769910565, rs758069019, rs886043807, rs72549402, rs72549395, rs188824058, rs763782349, rs375315619, rs754287486, rs1057518679, rs1060499649, rs1060499579, rs1554660803, rs1554407511, rs774824767, rs771690686, rs752992432, rs1553466082, rs72549396, rs772294884, rs764513998, rs1202682161, rs759202962, rs1562774655, rs1562831765, rs1562945221, rs917981474, rs1558927163, rs765889649, rs1562976061, rs72549399, rs1459273753, rs377160065, rs1559183717, rs760750012, rs1051861187, rs1558898789, rs928915940, rs752757689, rs1584678508, rs764581483, rs1574453508, rs751511532, rs1182781290, rs376368459, rs762702807, rs1578499691, rs199791850, rs1452792080, rs1458423947, rs1584747270, rs1584750653, rs1599066459, rs1599069873, rs1599166106, rs1574462504, rs1593114820, rs1057524081, rs1588081022, rs777460754, rs1251192873, rs1588117076, rs748671901, rs139314808, rs749009273, rs1588080674, rs1588080680, rs1588127136, rs1588135086, rs757693457, rs1574445178, rs768922690, rs1584422832, rs1584433525, rs1312396424, rs1792048079, rs774411820, rs575729461 |
24614073 |
Liver failure |
Liver Failure |
rs118203990, rs118203991, rs118203992, rs387907022, rs201861847, rs796065037, rs759315662, rs368196005, rs796052121, rs369437593, rs367683258, rs766314948, rs368085185, rs770446752, rs753039116, rs776797592, rs1490906786, rs1562849964, rs759960319, rs776597537, rs375350359, rs1573008071, rs1601977105, rs1174791046, rs1019313682 |
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Myopia |
Myopia |
rs387907109, rs146936371, rs587776903, rs786205127, rs398122836, rs199624584, rs587777625, rs786205216, rs758872875, rs764211125, rs1135402746, rs765658563, rs1555941129, rs1555941116, rs199923805, rs782555528, rs1554862601, rs1586620121, rs1387950081, rs2051026773, rs1422332023 |
27182965 |
Nonsyndromic deafness |
Nonsyndromic Deafness |
rs606231410, rs794729665, rs730880338, rs1566538321 |
20602916, 18616530, 26668150, 24853665, 24752540, 18172007 |
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Unknown |
Disease name |
Disease term |
dbSNP ID |
References |
Liver carcinoma |
Liver carcinoma |
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Non-syndromic sensorineural deafness |
Autosomal dominant non-syndromic sensorineural deafness type DFNA |
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Portal hypertension |
Portal Hypertension |
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Rickets |
Rickets |
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