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SNX29 (sorting nexin 29)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
92017
Gene nameGene Name - the full gene name approved by the HGNC.
Sorting nexin 29
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
SNX29
SynonymsGene synonyms aliases
A-388D4.1, RUNDC2A
ChromosomeChromosome number
16
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
16p13.13-p13.12
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT017400 hsa-miR-335-5p Microarray 18185580
MIRT047758 hsa-miR-7-5p CLASH 23622248
MIRT525326 hsa-miR-216b-3p PAR-CLIP 22012620
MIRT525325 hsa-miR-6128 PAR-CLIP 22012620
MIRT525324 hsa-miR-873-5p PAR-CLIP 22012620
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0035091 Function Phosphatidylinositol binding IEA
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q8TEQ0
Protein name Sorting nexin-29 (RUN domain-containing protein 2A)
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02759 RUN
44 179
RUN domain
Family
PF00787 PX
683 758
PX domain
Domain
Sequence
MSGSQNNDKRQFLLERLLDAVKQCQIRFGGRKEIASDSDSRVTCLCAQFEAVLQHGLKRS
RGLALTAAAIKQAAGFASKTETEPVFWYYVKEVLNKHELQRFYSLRHIASDVGRGRAWLR
CALNEHSLERYLHMLLADRCRLSTFYEDWSFVMDEERSSMLPTMAAGLNSILFAINIDN
K
DLNGQSKFAPTVSDLLKESTQNVTSLLKESTQGVSSLFREITASSAVSILIKPEQETDPL
PVVSRNVSADAKCKKERKKKKKVTNIISFDDEEDEQNSGDVFKKTPGAGESSEDNSDRSS
VNIMSAFESPFGPNSNGSQSSNSWKIDSLSLNGEFGYQKLDVKSIDDEDVDENEDDVYGN
SSGRKHRGHSESPEKPLEGNTCLSQMHSWAPLKVLHNDSDILFPVSGVGSYSPADAPLGS
LENGTGPEDHVLPDPGLRYSVEASSPGHGSPLSSLLPSASVPESMTISELRQATVAMMNR
KDELEEENRSLRNLLDGEMEHSAALRQEVDTLKRKVAEQEERQGMKVQALARENEVLKVQ
LKKYVGAVQMLKREGQTAEVPNLWSVDGEVTVAEQKPGEIAEELASSYERKLIEVAEMHG
ELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSDFEISNRALINV
WIPSVFLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRSLHHKLQNKYPQVRAYNFPPK
KAIGNKDAKFVEERRKQLQNYLRSVMNKVIQMVPEFAA
SPKKETLIQLMPFFVDITPPGE
PVNSRPKAASRFPKLSRGQPRETRNVEPQSGDL
Sequence length 813
Interactions View interactions
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Narcolepsy Narcolepsy rs104894574, rs387906655 19629137
Schizophrenia Schizophrenia rs74315508, rs74315509, rs13447324, rs1558507406, rs387906932, rs387906933, rs863223354, rs863223355, rs776061422, rs863223349, rs748809996, rs759748655, rs863223353, rs863223350, rs863223356, rs781821239, rs863223348, rs863223346, rs863223347, rs863223351, rs863223352, rs61734270, rs797045205, rs869312829, rs869312830, rs770913157, rs869312832, rs869312831, rs781720548, rs1262969313 31374203, 23358160
Unknown
Disease name Disease term dbSNP ID References
Mental depression Unipolar Depression, Major Depressive Disorder rs587778876, rs587778877 29559929, 29559929, 29662059

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