GediPNet logo

TLR10 (toll like receptor 10)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
81793
Gene nameGene Name - the full gene name approved by the HGNC.
Toll like receptor 10
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
TLR10
SynonymsGene synonyms aliases
CD290
ChromosomeChromosome number
4
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
4p14
SummarySummary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is a member of the Toll-like receptor (TLR) family which plays a fundamental role in pathogen recognition and activation of innate immunity. TLRs are highly conserved from Drosophila to humans and share structural and func
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT049221 hsa-miR-92a-3p CLASH 23622248
MIRT1426877 hsa-miR-1193 CLIP-seq
MIRT1426878 hsa-miR-122 CLIP-seq
MIRT1426879 hsa-miR-1226 CLIP-seq
MIRT1426880 hsa-miR-1273f CLIP-seq
Transcription factors
Transcription factor Regulation Reference
FOXP3 Unknown 17641056
RXRA Unknown 24373795
VDR Unknown 24373795
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0002224 Process Toll-like receptor signaling pathway IBA 21873635
GO:0002755 Process MyD88-dependent toll-like receptor signaling pathway TAS
GO:0004888 Function Transmembrane signaling receptor activity TAS 11267672
GO:0005515 Function Protein binding IPI 15728506, 23155421, 32814053
GO:0005886 Component Plasma membrane TAS
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q9BXR5
Protein name Toll-like receptor 10 (CD antigen CD290)
Protein function Participates in the innate immune response to microbial agents. Acts via MYD88 and TRAF6, leading to NF-kappa-B activation, cytokine secretion and the inflammatory response (By similarity).
PDB 2J67
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00560 LRR_1
50 71
Leucine Rich Repeat
Repeat
PF13855 LRR_8
72 129
Leucine rich repeat
Repeat
PF01582 TIR
633 802
TIR domain
Family
Sequence
MRLIRNIYIFCSIVMTAEGDAPELPEERELMTNCSNMSLRKVPADLTPATTTLDLSYNLL
FQLQSSDFHSV
SKLRVLILCHNRIQQLDLKTFEFNKELRYLDLSNNRLKSVTWYLLAGLR
YLDLSFNDF
DTMPICEEAGNMSHLEILGLSGAKIQKSDFQKIAHLHLNTVFLGFRTLPHY
EEGSLPILNTTKLHIVLPMDTNFWVLLRDGIKTSKILEMTNIDGKSQFVSYEMQRNLSLE
NAKTSVLLLNKVDLLWDDLFLILQFVWHTSVEHFQIRNVTFGGKAYLDHNSFDYSNTVMR
TIKLEHVHFRVFYIQQDKIYLLLTKMDIENLTISNAQMPHMLFPNYPTKFQYLNFANNIL
TDELFKRTIQLPHLKTLILNGNKLETLSLVSCFANNTPLEHLDLSQNLLQHKNDENCSWP
ETVVNMNLSYNKLSDSVFRCLPKSIQILDLNNNQIQTVPKETIHLMALRELNIAFNFLTD
LPGCSHFSRLSVLNIEMNFILSPSLDFVQSCQEVKTLNAGRNPFRCTCELKNFIQLETYS
EVMMVGWSDSYTCEYPLNLRGTRLKDVHLHELSCNTALLIVTIVVIMLVLGLAVAFCCLH
FDLPWYLRMLGQCTQTWHRVRKTTQEQLKRNVRFHAFISYSEHDSLWVKNELIPNLEKED
GSILICLYESYFDPGKSISENIVSFIEKSYKSIFVLSPNFVQNEWCHYEFYFAHHNLFHE
NSDHIILILLEPIPFYCIPTRYHKLKALLEKKAYLEWPKDRRKCGLFWANLRAAINVNVL
ATREMYELQTFTELNEESRGST
ISLMRTDCL
Sequence length 811
Interactions View interactions
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
 
Reactome
    Toll Like Receptor 10 (TLR10) Cascade
IRAK4 deficiency (TLR5)
MyD88 cascade initiated on plasma membrane
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Asthma Asthma rs324981, rs121912630, rs150116809, rs4950928, rs708494, rs1581842283 29785011
Unknown
Disease name Disease term dbSNP ID References
Vascular diseases Peripheral Arterial Diseases 27082954

| © 2021, Biomedical Informatics Centre, NIRRH |
ICMR-National Institute for Research in Reproductive Health, Jehangir Merwanji Street, Parel, Mumbai-400012
Tel: +91-22-24192104, Fax No: +91-22-24139412