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SVEP1 (sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1)
Gene
Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
79987
Gene nameGene Name - the full gene name approved by the HGNC.
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
SVEP1
SynonymsGene synonyms aliases
C9orf13, CCP22, POLYDOM, SEL-OB, SELOB
ChromosomeChromosome number
9
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
9q31.3
miRNAmiRNA information provided by mirtarbase database.
Gene miRNA Gene ontology Other IDs Protein Associated diseases
miRTarBase ID miRNA Experiments Reference
MIRT652959 hsa-miR-6738-3p HITS-CLIP 23824327
MIRT652960 hsa-miR-544a HITS-CLIP 23824327
MIRT652961 hsa-miR-4753-3p HITS-CLIP 23824327
MIRT652962 hsa-miR-20a-3p HITS-CLIP 23824327
MIRT652963 hsa-miR-130b-5p HITS-CLIP 23824327
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
Gene miRNA Gene ontology Other IDs Protein Associated diseases
GO ID Ontology Definition Evidence Reference
GO:0005509 Function Calcium ion binding IEA
GO:0005576 Component Extracellular region IEA
GO:0005634 Component Nucleus IDA 27892606
GO:0005737 Component Cytoplasm IDA 27892606
GO:0007155 Process Cell adhesion IEA
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
Gene miRNA Gene ontology Other IDs Protein Associated diseases
MIM
HGNC
e!Ensembl
Protein
Gene miRNA Gene ontology Other IDs Protein Associated diseases
UniProt ID Q4LDE5
Protein name Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 (CCP module-containing protein 22) (Polydom) (Selectin-like osteoblast-derived protein) (SEL-OB) (Serologically defined breast cancer antigen NY-BR-38)
Protein function May play a role in the cell attachment process.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00092 VWA
83 → 258
von Willebrand factor type A domain
 Domain
PF07699 Ephrin_rec_like
310 → 360
Putative ephrin-receptor like
Family
PF00084 Sushi
378 → 433
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
438 → 493
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
498 → 559
Sushi repeat (SCR repeat)
 Domain
PF02494 HYR
560 → 642
HYR domain
 Domain
PF02494 HYR
643 → 722
HYR domain
 Domain
PF07699 Ephrin_rec_like
1005 → 1052
Putative ephrin-receptor like
Family
PF07699 Ephrin_rec_like
1059 → 1106
Putative ephrin-receptor like
Family
PF07699 Ephrin_rec_like
1113 → 1160
Putative ephrin-receptor like
Family
PF00008 EGF
1197 → 1227
EGF-like domain
 Domain
PF00008 EGF
1235 → 1265
EGF-like domain
 Domain
PF00008 EGF
1273 → 1303
EGF-like domain
 Domain
PF12661 hEGF
1316 → 1337
Human growth factor-like EGF
 Domain
PF00008 EGF
1349 → 1379
EGF-like domain
 Domain
PF00008 EGF
1387 → 1417
EGF-like domain
 Domain
PF00354 Pentaxin
1429 → 1623
Pentaxin family
 Domain
PF00084 Sushi
1628 → 1685
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
1690 → 1743
Sushi repeat (SCR repeat)
 Domain
PF07645 EGF_CA
1745 → 1783
Calcium-binding EGF domain
 Domain
PF00084 Sushi
1789 → 1842
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
1847 → 1900
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
1905 → 1958
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
1963 → 2016
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
2021 → 2078
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
2083 → 2141
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
2146 → 2199
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
2204 → 2259
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
2264 → 2318
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
2323 → 2376
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
2381 → 2435
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
2440 → 2493
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
2498 → 2551
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
2556 → 2608
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
2658 → 2712
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
2717 → 2770
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
2775 → 2828
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
2833 → 2886
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
2891 → 2944
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
2949 → 3002
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
3007 → 3059
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
3064 → 3117
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
3122 → 3176
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
3181 → 3236
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
3241 → 3294
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
3299 → 3352
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
3357 → 3411
Sushi repeat (SCR repeat)
 Domain
PF00084 Sushi
3416 → 3468
Sushi repeat (SCR repeat)
 Domain
PF00008 EGF
3502 → 3530
EGF-like domain
 Domain
Sequence 
MWPRLAFCCWGLALVSGWATFQQMSPSRNFSFRLFPETAPGAPGSIPAPPAPGDEAAGSR
VERLGQAFRRRVRLLRELSERLELVFLVDDSSSVGEVNFRSELMFVRKLLSDFPVVPTAT
RVAIVTFSSKNYVVPRVDYISTRRARQHKCALLLQEIPAISYRGGGTYTKGAFQQAAQIL
LHARENSTKVVFLITDGYSNGGDPRPIAASLRDSGVEIFTFGIWQGNIRELNDMASTPKE
EHCYLLHSFEEFEALARRALHEDLPSGSFIQDDMVHCSYLCDEGKDCCDRMGSCKCGTHT
GHFECICEKGYYGKGLQYECTACPSGTYKPEGSPGGISSCIPCPDENHTSPPGSTSPEDC
VCREGYRASGQTCELVHCPALKPPENGYFIQNTCNNHFNAACGVRCHPGFDLVGSSIILC
LPNGLWSGSESYCRVRTCPHLRQPKHGHISCSTREMLYKTTCLVACDEGYRLEGSDKLTC
QGNSQWDGPEPRCVERHCSTFQMPKDVIISPHNCGKQPAKFGTICYVSCRQGFILSGVKE
MLRCTTSGKWNVGVQAAVCKDVEAPQINCPKDIEAKTLEQQDSANVTWQIPTAKDNSGEK
VSVHVHPAFTPPYLFPIGDVAIVYTATDLSGNQASCIFHIKVIDAEPPVIDWCRSPPPVQ
VSEKVHAASWDEPQFSDNSGAELVITRSHTQGDLFPQGETIVQYTATDPSGNNRTCDIHI
VIKGSPCEIPFTPVNGDFICTPDNTGVNCTLTCLEGYDFTEGSTDKYYCAYEDGVWKPTY
TTEWPDCAKKRFANHGFKSFEMFYKAARCDDTDLMKKFSEAFETTLGKMVPSFCSDAEDI
DCRLEENLTKKYCLEYNYDYENGFAIGPGGWGAANRLDYSYDDFLDTVQETATSIGNAKS
SRIKRSAPLSDYKIKLIFNITASVPLPDERNDTLEWENQQRLLQTLETITNKLKRTLNKD
PMYSFQLASEILIADSNSLETKKASPFCRPGSVLRGRMCVNCPLGTYYNLEHFTCESCRI
GSYQDEEGQLECKLCPSGMYTEYIHSRNISDCKAQCKQGTYSYSGLETCESCPLGTYQPK
FGSRSCLSCPENTSTVKRGAVNISACGVPCPEGKFSRSGLMPCHPCPRDYYQPNAGKAFC
LACPFYGTTPFAGSRSITECSSFSSTFSAAEESVVPPASLGHIKKRHEISSQVFHECFFN
PCHNSGTCQQLGRGYVCLCPLGYTGLKCETDIDECSPLPCLNNGVCKDLVGEFICECPSG
YTGQRCEENINECSSSPCLNKGICVDGVAGYRCTCVKGFVGLHCETEVNECQSNPCLNNA
VCEDQVGGFLCKCPPGFLGTRCGKNVDECLSQPCKNGATCKDGANSFRCLCAAGFTGSHC
ELNINECQSNPCRNQATCVDELNSYSCKCQPGFSGKRCETEQSTGFNLDFEVSGIYGYVM
LDGMLPSLHALTCTFWMKSSDDMNYGTPISYAVDNGSDNTLLLTDYNGWVLYVNGREKIT
NCPSVNDGRWHHIAITWTSANGIWKVYIDGKLSDGGAGLSVGLPIPGGGALVLGQEQDKK
GEGFSPAESFVGSISQLNLWDYVLSPQQVKSLATSCPEELSKGNVLAWPDFLSGIVGKVK
IDSKSIFCSDCPRLGGSVPHLRTASEDLKPGSKVNLFCDPGFQLVGNPVQYCLNQGQWTQ
PLPHCERISCGVPPPLENGFHSADDFYAGSTVTYQCNNGYYLLGDSRMFCTDNGSWNGVS
PSCLDVDECAVGSDCSEHASCLNVDGSYICSCVPPYTGDGKNCAEPIKCKAPGNPENGHS
SGEIYTVGAEVTFSCQEGYQLMGVTKITCLESGEWNHLIPYCKAVSCGKPAIPENGCIEE
LAFTFGSKVTYRCNKGYTLAGDKESSCLANSSWSHSPPVCEPVKCSSPENINNGKYILSG
LTYLSTASYSCDTGYSLQGPSIIECTASGIWDRAPPACHLVFCGEPPAIKDAVITGNNFT
FRNTVTYTCKEGYTLAGLDTIECLADGKWSRSDQQCLAVSCDEPPIVDHASPETAHRLFG
DIAFYYCSDGYSLADNSQLLCNAQGKWVPPEGQDMPRCIAHFCEKPPSVSYSILESVSKA
KFAAGSVVSFKCMEGFVLNTSAKIECMRGGQWNPSPMSIQCIPVRCGEPPSIMNGYASGS
NYSFGAMVAYSCNKGFYIKGEKKSTCEATGQWSSPIPTCHPVSCGEPPKVENGFLEHTTG
RIFESEVRYQCNPGYKSVGSPVFVCQANRHWHSESPLMCVPLDCGKPPPIQNGFMKGENF
EVGSKVQFFCNEGYELVGDSSWTCQKSGKWNKKSNPKCMPAKCPEPPLLENQLVLKELTT
EVGVVTFSCKEGHVLQGPSVLKCLPSQQWNDSFPVCKIVLCTPPPLISFGVPIPSSALHF
GSTVKYSCVGGFFLRGNSTTLCQPDGTWSSPLPECVPVECPQPEEIPNGIIDVQGLAYLS
TALYTCKPGFELVGNTTTLCGENGHWLGGKPTCKAIECLKPKEILNGKFSYTDLHYGQTV
TYSCNRGFRLEGPSALTCLETGDWDVDAPSCNAIHCDSPQPIENGFVEGADYSYGAIIIY
SCFPGFQVAGHAMQTCEESGWSSSIPTCMPIDCGLPPHIDFGDCTKLKDDQGYFEQEDDM
MEVPYVTPHPPYHLGAVAKTWENTKESPATHSSNFLYGTMVSYTCNPGYELLGNPVLICQ
EDGTWNGSAPSCISIECDLPTAPENGFLRFTETSMGSAVQYSCKPGHILAGSDLRLCLEN
RKWSGASPRCEAISCKKPNPVMNGSIKGSNYTYLSTLYYECDPGYVLNGTERRTCQDDKN
WDEDEPICIPVDCSSPPVSANGQVRGDEYTFQKEIEYTCNEGFLLEGARSRVCLANGSWS
GATPDCVPVRCATPPQLANGVTEGLDYGFMKEVTFHCHEGYILHGAPKLTCQSDGNWDAE
IPLCKPVNCGPPEDLAHGFPNGFSFIHGGHIQYQCFPGYKLHGNSSRRCLSNGSWSGSSP
SCLPCRCSTPVIEYGTVNGTDFDCGKAARIQCFKGFKLLGLSEITCEADGQWSSGFPHCE
HTSCGSLPMIPNAFISETSSWKENVITYSCRSGYVIQGSSDLICTEKGVWSQPYPVCEPL
SCGSPPSVANAVATGEAHTYESEVKLRCLEGYTMDTDTDTFTCQKDGRWFPERISCSPKK
CPLPENITHILVHGDDFSVNRQVSVSCAEGYTFEGVNISVCQLDGTWEPPFSDESCSPVS
CGKPESPEHGFVVGSKYTFESTIIYQCEPGYELEGNRERVCQENRQWSGGVAICKETRCE
TPLEFLNGKADIENRTTGPNVVYSCNRGYSLEGPSEAHCTENGTWSHPVPLCKPNPCPVP
FVIPENALLSEKEFYVDQNVSIKCREGFLLQGHGIITCNPDETWTQTSAKCEKISCGPPA
HVENAIARGVHYQYGDMITYSCYSGYMLEGFLRSVCLENGTWTSPPICRAVCRFPCQNGG
ICQRPNACSCPEGWMGRLCEEPICILPCLNGGRCVAPYQCDCPPGWTGSRCHTAVCQSPC
LNGGKCVRPNRCHCLSSWTGHNCSRKRRTGF
Sequence length 3571
Interactions View interactions
Associated diseases
Gene miRNA Gene ontology Other IDs Protein Associated diseases
Causal
Disease name Disease term dbSNP ID References
Coronary artery disease Coronary Artery Disease rs137852988, rs121918313, rs-1, rs121918529, rs121918531, rs137852340, rs405509, rs1555800701, rs1215189537 29212778, 28714975
Coronary heart disease Coronary heart disease rs-1 23364394
Unknown
Disease name Disease term dbSNP ID References
Cardiovascular diseases Cardiovascular Diseases 30595370

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