GeDiPNet: Comprehensive Gene Data - OMIM, HGNC, Ensembl, UniProt, GO, Transcription Factors & miRNA

Home
Browse
- Genes
- Diseases
- Pathways
  - Reactome
  - KEGG
Analysis
Help
Links
FAQ
Contact us

ZSCAN20 (zinc finger and SCAN domain containing 20)

Gene

Zinc finger and SCAN domain containing 20

ZSCAN20

KOX29, ZFP-31, ZNF31, ZNF360

1

1p35.1

Show/Hide all(64)

miRTarBase ID	miRNA	Experiments	Reference
MIRT1543564	hsa-miR-1225-5p	CLIP-seq
MIRT1543565	hsa-miR-3183	CLIP-seq
MIRT1543566	hsa-miR-329	CLIP-seq
MIRT1543567	hsa-miR-362-3p	CLIP-seq
MIRT1543568	hsa-miR-3941	CLIP-seq
MIRT1543569	hsa-miR-3978	CLIP-seq
MIRT1543570	hsa-miR-4292	CLIP-seq
MIRT1543571	hsa-miR-4308	CLIP-seq
MIRT1543572	hsa-miR-4717-5p	CLIP-seq
MIRT1543573	hsa-miR-4723-3p	CLIP-seq
MIRT1543574	hsa-miR-548c-3p	CLIP-seq
MIRT1543575	hsa-miR-561	CLIP-seq
MIRT1543576	hsa-miR-603	CLIP-seq
MIRT1543577	hsa-miR-645	CLIP-seq
MIRT1543578	hsa-miR-670	CLIP-seq
MIRT2164011	hsa-miR-147	CLIP-seq
MIRT2164012	hsa-miR-193a-5p	CLIP-seq
MIRT2164013	hsa-miR-300	CLIP-seq
MIRT2164014	hsa-miR-381	CLIP-seq
MIRT2164015	hsa-miR-3911	CLIP-seq
MIRT2164016	hsa-miR-4320	CLIP-seq
MIRT2164017	hsa-miR-4666-5p	CLIP-seq
MIRT2164018	hsa-miR-4778-5p	CLIP-seq
MIRT2164019	hsa-miR-4790-3p	CLIP-seq
MIRT2164020	hsa-miR-548p	CLIP-seq
MIRT2164021	hsa-miR-600	CLIP-seq
MIRT2164022	hsa-miR-624	CLIP-seq
MIRT2164023	hsa-miR-642b	CLIP-seq
MIRT2164024	hsa-miR-644	CLIP-seq
MIRT2383180	hsa-miR-1226	CLIP-seq
MIRT2383181	hsa-miR-1229	CLIP-seq
MIRT2164011	hsa-miR-147	CLIP-seq
MIRT2164012	hsa-miR-193a-5p	CLIP-seq
MIRT2164013	hsa-miR-300	CLIP-seq
MIRT1543565	hsa-miR-3183	CLIP-seq
MIRT2164014	hsa-miR-381	CLIP-seq
MIRT2164015	hsa-miR-3911	CLIP-seq
MIRT2164016	hsa-miR-4320	CLIP-seq
MIRT2164017	hsa-miR-4666-5p	CLIP-seq
MIRT1543573	hsa-miR-4723-3p	CLIP-seq
MIRT2383182	hsa-miR-4733-3p	CLIP-seq
MIRT2164018	hsa-miR-4778-5p	CLIP-seq
MIRT2383183	hsa-miR-543	CLIP-seq
MIRT2164020	hsa-miR-548p	CLIP-seq
MIRT2164021	hsa-miR-600	CLIP-seq
MIRT2164022	hsa-miR-624	CLIP-seq
MIRT2164023	hsa-miR-642b	CLIP-seq
MIRT2164024	hsa-miR-644	CLIP-seq
MIRT2164011	hsa-miR-147	CLIP-seq
MIRT2164012	hsa-miR-193a-5p	CLIP-seq
MIRT2164013	hsa-miR-300	CLIP-seq
MIRT2164014	hsa-miR-381	CLIP-seq
MIRT2164015	hsa-miR-3911	CLIP-seq
MIRT2164016	hsa-miR-4320	CLIP-seq
MIRT2164017	hsa-miR-4666-5p	CLIP-seq
MIRT2164018	hsa-miR-4778-5p	CLIP-seq
MIRT2164020	hsa-miR-548p	CLIP-seq
MIRT2164021	hsa-miR-600	CLIP-seq
MIRT2164022	hsa-miR-624	CLIP-seq
MIRT2164024	hsa-miR-644	CLIP-seq
MIRT1543565	hsa-miR-3183	CLIP-seq
MIRT1543572	hsa-miR-4717-5p	CLIP-seq
MIRT1543573	hsa-miR-4723-3p	CLIP-seq
MIRT1543577	hsa-miR-645	CLIP-seq

Show/Hide all(5)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA	21873635
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA	21873635
GO:0005634	Component	Nucleus	IEA
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA	21873635
GO:0046872	Function	Metal ion binding	IEA

MIM	HGNC	e!Ensembl
611315	13093	ENSG00000121903

Protein

UniProt ID

Protein name

Zinc finger and SCAN domain-containing protein 20 (Zinc finger protein 31) (Zinc finger protein 360) (Zinc finger protein KOX29)

Protein function

May be involved in transcriptional regulation.

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF02023	SCAN	47 → 136	SCAN domain	Domain
PF13837	Myb_DNA-bind_4	323 → 408		Domain
PF13837	Myb_DNA-bind_4	483 → 568		Domain
PF00096	zf-C2H2	710 → 732	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	738 → 760	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	766 → 788	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	794 → 816	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	875 → 897	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	903 → 925	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	931 → 953	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	959 → 981	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	987 → 1009	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	1015 → 1037	Zinc finger, C2H2 type	Domain

Sequence

MAMALELQAQASPQPEPEELLIVKLEEDSWGSESKLWEKDRGSVSGPEASRQRFRQFQYR
DAAGPHEAFSQLWALCCRWLRPEIRLKEQILELLVLEQFLTILPREVQTWVQARHPESGE
EAVALVEDWHRETRTAGQSGLELHTEETRPLKTGEEAQSFQLQPVDPWPEGQSQKKGVKN
TCPDLPNHLNAEVAPQPLKESAVLTPRVPTLPKMGSVGDWEVTAESQEALGPGKHAEKEL
CKDPPGDDCGNSVCLGVPVSKPSNTSEKEQGPEFWGLSLINSGKRSTADYSLDNEPAQAL
TWRDSRAWEEQYQWDVEDMKVSGVHWGYEETKTFLAILSESPFSEKLRTCHQNRQVYRAI
AEQLRARGFLRTLEQCRYRVKNLLRNYRKAKSSHPPGTCPFYEELEALVRARTAIRATDG
PGEAVALPRLGYSDAEMDEQEEGGWDPEEMAEDCNGAGLVNVESTQGPRIAGAPALFQSR
IAGVHWGYEETKAFLAILSESPFSEKLRTCHQNSQVYRAIAERLCALGFLRTLEQCRYRF
KNLLRSYRKAKSSHPPGTCPFYEELDSLMRARAAVRAMGTVREAAGLPRCGQSSAETDAQ
EAWGEVANEDAVKPSTLCPKAPDMGFEMRHEDEDQISEQDIFEGLPGALSKCPTEAVCQP
LDWGEDSENENEDEGQWGNPSQEQWQESSSEEDLEKLIDHQGLYLAEKPYKCDTCMKSFS
RSSHFIAHQRIHTGEKPYKCLECGKNFSDRSNLNTHQRIHTGEKPYKCLECGKSFSDHSN
LITHQRIHTGEKPYKCGECWKSFNQSSNLLKHQRIHLGGNPDQCSEPGGNFAQSPSFSAH
WRNSTEETAPEQPQSISKDLNSPGPHSTNSGEKLYECSECGRSFSKSSALISHQRIHTGE
KPYECAECGKSFSKSSTLANHQRTHTGEKPYKCVDCGKCFSERSKLITHQRVHTGEKPYK
CLECGKFFRDRSNLITHQRIHTGEKPYKCRECGKCFNQSSSLIIHQRIHTGEKPYKCTEC
GKDFNNSSHFSAHRRTHAGGKAS

Sequence length

1043

Interactions

View interactions

Associated diseases

Show/Hide Causal Diseases (1)

Causal
Disease name	Disease term	dbSNP ID	References
Diabetes mellitus	Diabetes Mellitus, Non-Insulin-Dependent	rs587776515, rs61730328, rs606231121, rs606231122, rs79020217, rs77625743, rs78378398, rs606231123, rs4402960, rs1362648752, rs3745368, rs3792267, rs3842570, rs5030952, rs2975760, rs119489103, rs7903146, rs12255372, rs11196205, rs104893649, rs80356624, rs80356616, rs80356625, rs80356611, rs104894237, rs80356613, rs137852740, rs137852786, rs387906407, rs151344623, rs28938469, rs28936371, rs137852672, rs80356637, rs80356642, rs80356653, rs137852673, rs137852674, rs80356634, rs80356651, rs193929360, rs137853334, rs137853335, rs137853336, rs1600731198, rs137853338, rs121964882, rs121964883, rs387906511, rs121964884, rs121964885, rs2147483647, rs387906512, rs121964887, rs121964888, rs121964889, rs121964890, rs121964891, rs28934878, rs74315383, rs121964893, rs886037620, rs886037621, rs80356663, rs121434593, rs121913150, rs587776825, rs137853236, rs2135842335, rs137853237, rs137853238, rs2135818776, rs1566092470, rs1463923467, rs137853243, rs137853244, rs2135839114, rs137853245, rs2135847417, rs121918407, rs104894005, rs104894006, rs80356655, rs104894008, rs104894009, rs104894010, rs104894011, rs80356654, rs104894016, rs193929376, rs193929374, rs193929375, rs193929373, rs80356666, rs80356669, rs80356664, rs193929366, rs1048095, rs193929355, rs193929356, rs1259467443, rs104893642, rs387906777, rs387906779, rs141804752, rs182349376, rs184917682, rs193922396, rs193922400, rs193922401, rs137852676, rs193922407, rs193922638, rs193922257, rs193922258, rs193922259, rs193922260, rs193922261, rs193922262, rs193922263, rs193922264, rs193922265, rs193922268, rs193921338, rs193922269, rs193922272, rs193922273, rs193922275, rs193922278, rs193922279, rs193922280, rs193922281, rs193922282, rs193922283, rs193922284, rs193922286, rs193922287, rs193922289, rs193922291, rs193922295, rs193922297, rs193922300, rs193922302, rs193922303, rs193922308, rs193922313, rs193922314, rs144723656, rs193922315, rs193922316, rs193922317, rs148311934, rs193922319, rs193922320, rs193922326, rs193922329, rs193922330, rs193922331, rs193922335, rs193922336, rs193922338, rs193922340, rs193922341, rs193922471, rs193922475, rs193922476, rs193922479, rs193922355, rs193922356, rs193922576, rs193922578, rs193922582, rs193922588, rs193922592, rs193922594, rs193922596, rs386134267, rs193922598, rs193922599, rs193922600, rs193922604, rs193922605, rs397514580, rs397515519, rs267601516, rs587780343, rs587780345, rs587780346, rs587780347, rs587780357, rs148954387, rs61736969, rs587783673, rs587783672, rs587783669, rs786204676, rs794727236, rs151344624, rs794727775, rs794727839, rs199946797, rs869320673, rs796065047, rs759072800, rs797045595, rs797045209, rs797045207, rs797045213, rs797045623, rs863225280, rs149703259, rs864321656, rs139964066, rs777870079, rs878853246, rs769268803, rs886039380, rs886041392, rs886041391, rs886042610, rs143064649, rs1057516192, rs746480424, rs1057516281, rs576684889, rs754728827, rs1057520291, rs1057520779, rs893256143, rs1057520504, rs1057524790, rs1057524902, rs1057524904, rs1057524905, rs764232985, rs1064793998, rs1064794268, rs769086289, rs369429452, rs1085307913, rs1131691416, rs765432081, rs1131692182, rs748749585, rs1554335441, rs762263694, rs1312678560, rs767565869, rs1375656631, rs1554335391, rs1360415315, rs1554335616, rs1554335752, rs1554909277, rs769518471, rs757171524, rs768951263, rs762703502, rs1555212248, rs1555212359, rs1555813319, rs1555816654, rs1553638903, rs1553638909, rs948820149, rs371977235, rs1553784995, rs76474829, rs200998587, rs1415041911, rs1554334894, rs1260178539, rs1554335421, rs1555211904, rs779184183, rs1554335564, rs200670692, rs1400535021, rs1554334872, rs1555212749, rs1553876668, rs1553878211, rs954727530, rs1554924035, rs372307320, rs925231098, rs1554913069, rs1554933565, rs766431403, rs746714109, rs751279984, rs770664202, rs1008906426, rs758844607, rs1554924540, rs1566092307, rs753998395, rs1565885935, rs1167124132, rs1376796469, rs556436603, rs1562715657, rs1486280029, rs1564869850, rs755259997, rs769569410, rs1172328722, rs1286294151, rs1375557127, rs1568731279, rs1562715426, rs556581174, rs1564865302, rs1565886545, rs776793516, rs1568724014, rs1392795567, rs781260712, rs1562719705, rs1382448285, rs1564977373, rs750586210, rs1598842892, rs1583592247, rs780612692, rs1593060859, rs1476637197, rs751279776, rs1593060890, rs1191912908, rs1167675604, rs1583601110, rs1593058932, rs778611627, rs753296261	26629533

| © 2021, Biomedical Informatics Centre, NIRRH |
ICMR-National Institute for Research in Reproductive Health, Jehangir Merwanji Street, Parel, Mumbai-400012
Tel: +91-22-24192104, Fax No: +91-22-24139412