ZNF23 (zinc finger protein 23)

Gene

• Entrez ID: 7571
• Gene name: Zinc finger protein 23
• Gene symbol: ZNF23
• Synonyms: KOX16, ZNF359, ZNF612, Zfp612
• Chromosome: 16
• Chromosome location: 16q22.2

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT029191	hsa-miR-26b-5p	Microarray	19088304
MIRT042854	hsa-miR-324-3p	CLASH	23622248
MIRT564742	hsa-miR-181b-5p	PAR-CLIP	20371350
MIRT564741	hsa-miR-181a-5p	PAR-CLIP	20371350
MIRT564740	hsa-miR-181c-5p	PAR-CLIP	20371350
MIRT564739	hsa-miR-181d-5p	PAR-CLIP	20371350
MIRT564738	hsa-miR-4262	PAR-CLIP	20371350
MIRT564737	hsa-miR-664a-3p	PAR-CLIP	20371350
MIRT564736	hsa-miR-4712-5p	PAR-CLIP	20371350
MIRT564735	hsa-miR-770-5p	PAR-CLIP	20371350
MIRT564734	hsa-miR-6845-3p	PAR-CLIP	20371350
MIRT564733	hsa-miR-6873-3p	PAR-CLIP	20371350
MIRT564732	hsa-miR-4768-5p	PAR-CLIP	20371350
MIRT564731	hsa-miR-6833-3p	PAR-CLIP	20371350
MIRT564730	hsa-miR-6809-3p	PAR-CLIP	20371350
MIRT564742	hsa-miR-181b-5p	PAR-CLIP	20371350
MIRT564741	hsa-miR-181a-5p	PAR-CLIP	20371350
MIRT564740	hsa-miR-181c-5p	PAR-CLIP	20371350
MIRT564739	hsa-miR-181d-5p	PAR-CLIP	20371350
MIRT564738	hsa-miR-4262	PAR-CLIP	20371350
MIRT564737	hsa-miR-664a-3p	PAR-CLIP	20371350
MIRT564736	hsa-miR-4712-5p	PAR-CLIP	20371350
MIRT564735	hsa-miR-770-5p	PAR-CLIP	20371350
MIRT564734	hsa-miR-6845-3p	PAR-CLIP	20371350
MIRT564733	hsa-miR-6873-3p	PAR-CLIP	20371350
MIRT564732	hsa-miR-4768-5p	PAR-CLIP	20371350
MIRT564731	hsa-miR-6833-3p	PAR-CLIP	20371350
MIRT564730	hsa-miR-6809-3p	PAR-CLIP	20371350
MIRT1518762	hsa-miR-1263	CLIP-seq
MIRT1518763	hsa-miR-4263	CLIP-seq
MIRT1518764	hsa-miR-4735-5p	CLIP-seq
MIRT1518765	hsa-miR-576-5p	CLIP-seq
MIRT2156511	hsa-miR-106a	CLIP-seq
MIRT2156512	hsa-miR-106b	CLIP-seq
MIRT2156513	hsa-miR-1291	CLIP-seq
MIRT2156514	hsa-miR-1305	CLIP-seq
MIRT2156515	hsa-miR-136	CLIP-seq
MIRT2156516	hsa-miR-17	CLIP-seq
MIRT2156517	hsa-miR-20a	CLIP-seq
MIRT2156518	hsa-miR-20b	CLIP-seq
MIRT2156519	hsa-miR-300	CLIP-seq
MIRT2156520	hsa-miR-3121-5p	CLIP-seq
MIRT2156521	hsa-miR-328	CLIP-seq
MIRT2156522	hsa-miR-3609	CLIP-seq
MIRT2156523	hsa-miR-3677-5p	CLIP-seq
MIRT2156524	hsa-miR-381	CLIP-seq
MIRT2156525	hsa-miR-4276	CLIP-seq
MIRT2156526	hsa-miR-4796-3p	CLIP-seq
MIRT2156527	hsa-miR-513a-3p	CLIP-seq
MIRT2156528	hsa-miR-515-5p	CLIP-seq
MIRT2156529	hsa-miR-519d	CLIP-seq
MIRT2156530	hsa-miR-548ah	CLIP-seq
MIRT2156531	hsa-miR-607	CLIP-seq
MIRT2156532	hsa-miR-663b	CLIP-seq
MIRT2156533	hsa-miR-93	CLIP-seq
MIRT2156531	hsa-miR-607	CLIP-seq
MIRT2156514	hsa-miR-1305	CLIP-seq
MIRT2156531	hsa-miR-607	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA	21873635
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA	21873635
GO:0005515	Function	Protein binding	IPI	32296183, 32814053
GO:0005634	Component	Nucleus	IBA	21873635
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA	21873635
GO:0046872	Function	Metal ion binding	IEA
GO:1990837	Function	Sequence-specific double-stranded DNA binding	IDA	28473536

Other IDs

• MIM: 194527
• HGNC: 13023
• e!Ensembl: ENSG00000167377

Protein

• UniProt ID: P17027
• Protein name: Zinc finger protein 23 (Zinc finger protein 359) (Zinc finger protein 612) (Zinc finger protein KOX16)
• Protein function: May be involved in transcriptional regulation. May have a role in embryonic development.
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF00096	zf-C2H2	196 → 218	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	224 → 246	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	252 → 274	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	308 → 330	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	336 → 358	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	364 → 386	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	392 → 414	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	420 → 442	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	448 → 470	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	476 → 498	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	504 → 526	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	560 → 582	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	588 → 610	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	616 → 638	Zinc finger, C2H2 type	Domain

• Sequence:

  MLENYGNVASLGFPLLKPAVISQLEGGSELGGSSPLAAGTGLQGLQTDIQTDNDLTKEMY
  EGKENVSFELQRDFSQETDFSEASLLEKQQEVHSAGNIKKEKSNTIDGTVKDETSPVEEC
  FFSQSSNSYQCHTITGEQPSGCTGLGKSISFDTKLVKHEIINSEERPFKCEELVEPFRCD
  SQLIQHQENNTEEKPYQCSECGKAFSINEKLIWHQRLHSGEKPFKCVECGKSFSYSSHYI
  THQTIHSGEKPYQCKMCGKAFSVNGSLSRHQRIHTGEKPYQCKECGNGFSCSSAYITHQR
  VHTGEKPYECNDCGKAFNVNAKLIQHQRIHTGEKPYECNECGKGFRCSSQLRQHQSIHTG
  EKPYQCKECGKGFNNNTKLIQHQRIHTGEKPYECTECGKAFSVKGKLIQHQRIHTGEKPY
  ECNECGKAFRCNSQFRQHLRIHTGEKPYECNECGKAFSVNGKLMRHQRIHTGEKPFECNE
  CGRCFTSKRNLLDHHRIHTGEKPYQCKECGKAFSINAKLTRHQRIHTGEKPFKCMECEKA
  FSCSSNYIVHQRIHTGEKPFQCKECGKAFHVNAHLIRHQRSHTGEKPFRCVECGKGFSFS
  SDYIIHQTVHTWKKPYMCSVCGKAFRFSFQLSQHQSVHSEGKS

• Sequence length: 643

Pathways

Reactome:

Generic Transcription Pathway

Associated diseases

Unknown
Disease name	Disease term	dbSNP ID	References
Liver carcinoma	Liver carcinoma		21965783