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UCHL1 (ubiquitin C-terminal hydrolase L1)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
7345
Gene nameGene Name - the full gene name approved by the HGNC.
Ubiquitin C-terminal hydrolase L1
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
UCHL1
SynonymsGene synonyms aliases
HEL-117, HEL-S-53, NDGOA, PARK5, PGP 9.5, PGP9.5, PGP95, SPG79, SPG79A, UCHL-1, Uch-L1
ChromosomeChromosome number
4
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
4p13
SummarySummary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene belongs to the peptidase C12 family. This enzyme is a thiol protease that hydrolyzes a peptide bond at the C-terminal glycine of ubiquitin. This gene is specifically expressed in the neurons and in cells of the diffuse neu
SNPsSNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs121917767 C>A,G,T Risk-factor Missense variant, coding sequence variant, synonymous variant
rs768996179 G>A Pathogenic Coding sequence variant, missense variant
rs1057519600 C>A Pathogenic Coding sequence variant, missense variant
rs1554004920 ->AGAG Likely-pathogenic Coding sequence variant, frameshift variant
rs1554004931 T>C,G Likely-pathogenic Splice donor variant
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT048928 hsa-miR-92a-3p CLASH 23622248
MIRT047324 hsa-miR-181a-5p CLASH 23622248
MIRT041399 hsa-miR-193b-3p CLASH 23622248
MIRT037262 hsa-miR-877-5p CLASH 23622248
MIRT256053 hsa-miR-218-5p HITS-CLIP 23212916
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0004197 Function Cysteine-type endopeptidase activity IDA 8639624
GO:0004843 Function Thiol-dependent ubiquitin-specific protease activity IBA 21873635
GO:0004843 Function Thiol-dependent ubiquitin-specific protease activity IDA 9521656
GO:0005515 Function Protein binding IPI 12082530, 16049941, 16169070, 19615732, 20029029, 21044950, 31980649, 32814053
GO:0005654 Component Nucleoplasm IDA
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID P09936
Protein name Ubiquitin carboxyl-terminal hydrolase isozyme L1 (UCH-L1) (EC 3.4.19.12) (Neuron cytoplasmic protein 9.5) (PGP 9.5) (PGP9.5) (Ubiquitin thioesterase L1)
Protein function Deubiquitinase that plays a role in the regulation of several processes such as maintenance of synaptic function, cardiac function, inflammatory response or osteoclastogenesis (PubMed:22212137, PubMed:23359680). Abrogates the ubiquitination of m
PDB 2ETL , 2LEN , 3IFW , 3IRT , 3KVF , 3KW5 , 4DM9 , 4JKJ , 7ZM0 , 8DY8 , 8EDE , 8PW1 , 8XI7
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01088 Peptidase_C12
3 206
Ubiquitin carboxyl-terminal hydrolase, family 1
Domain
Sequence
Sequence length 223
Interactions View interactions
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
 
KEGG
 
Reactome
  Parkinson disease
Pathways of neurodegeneration - multiple diseases
  UCH proteinases
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Dysautonomia Dysautonomia rs111033171, rs137853022, rs28939712, rs754348901, rs749052963, rs1057517169, rs1057516865, rs763445509, rs767527819, rs781333644, rs1239081703, rs1554696574, rs539544212, rs1201626345, rs774890086, rs1554703061, rs1554703613, rs1319053366, rs1554703851, rs868073099, rs926177767, rs376078668, rs1554695299, rs1554696648, rs1554696934, rs1554699327, rs1554691572, rs1554695846, rs1554697001, rs770668926, rs1554698037, rs759412460, rs1554702142, rs765572951, rs1554702880, rs1554703831, rs760774999, rs1554696650, rs757972943, rs1554703874, rs1554703907, rs571348995
Esophagus neoplasm Esophageal Neoplasms, Malignant neoplasm of esophagus rs28934578, rs121918714, rs1567556006, rs1575166666 15930319
Gallbladder cancer Malignant neoplasm of gallbladder rs121913530, rs377767360, rs121913529, rs730882029, rs730882005, rs786202799, rs876659802, rs1057519718, rs764146326 16965602
Lung carcinoma Non-Small Cell Lung Carcinoma rs1805076, rs121909071, rs121913530, rs112445441, rs121913529, rs121913535, rs121913297, rs121913279, rs104886003, rs397516975, rs11554290, rs121913364, rs121913351, rs121913369, rs121913355, rs121912470, rs121913273, rs121913281, rs121913348, rs727503093, rs121913353, rs397516890, rs397516896, rs121913378, rs397516897, rs397516977, rs397516978, rs397516979, rs397516980, rs397516981, rs397516982, rs121913240, rs17851045, rs397517086, rs121913428, rs397517094, rs397517098, rs397517106, rs121913465, rs397517108, rs397517111, rs397517112, rs397517114, rs397517116, rs1554350366, rs397517127, rs397517200, rs397517202, rs121913283, rs121913370, rs121913357, rs727503106, rs121913238, rs727503108, rs397517040, rs397516976, rs1555618025, rs1057519729, rs1584238193 17094902
Unknown
Disease name Disease term dbSNP ID References
Abnormal male sexual function Abnormal male sexual function
Anxiety disorder Anxiety
Cerebellar atrophy Cerebellar atrophy
Cerebral atrophy Cerebral atrophy

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