UBE2L3 (ubiquitin conjugating enzyme E2 L3)
|
Gene
|
Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
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7332 |
Gene nameGene Name - the full gene name approved by the HGNC.
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Ubiquitin conjugating enzyme E2 L3 |
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
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UBE2L3 |
SynonymsGene synonyms aliases
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E2-F1, L-UBC, UBCH7, UbcM4 |
ChromosomeChromosome number
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22 |
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
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22q11.21 |
SummarySummary of gene provided in NCBI Entrez Gene.
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The modification of proteins with ubiquitin is an important cellular mechanism for targeting abnormal or short-lived proteins for degradation. Ubiquitination involves at least three classes of enzymes: ubiquitin-activating enzymes (E1s), ubiquitin-conjuga |
miRNAmiRNA information provided by mirtarbase database.
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Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
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GO ID |
Ontology |
Definition |
Evidence |
Reference |
GO:0000151 |
Component |
Ubiquitin ligase complex |
IBA |
21873635 |
GO:0000151 |
Component |
Ubiquitin ligase complex |
TAS |
8563171 |
GO:0000209 |
Process |
Protein polyubiquitination |
IBA |
21873635 |
GO:0000209 |
Process |
Protein polyubiquitination |
IDA |
10888878, 14765125 |
GO:0003713 |
Function |
Transcription coactivator activity |
IDA |
15367689 |
GO:0003723 |
Function |
RNA binding |
HDA |
22658674 |
GO:0004842 |
Function |
Ubiquitin-protein transferase activity |
IDA |
14765125, 20061386, 21532592 |
GO:0004842 |
Function |
Ubiquitin-protein transferase activity |
IMP |
10888878 |
GO:0004842 |
Function |
Ubiquitin-protein transferase activity |
TAS |
8563171, 8576257 |
GO:0005515 |
Function |
Protein binding |
IPI |
9990509, 10888878, 15367689, 16118314, 16169070, 16709802, 17003263, 19340006, 19549727, 23707686, 24076655, 24446487, 27565346, 28514442, 32296183, 32814053 |
GO:0005524 |
Function |
ATP binding |
IEA |
|
GO:0005634 |
Component |
Nucleus |
IBA |
21873635 |
GO:0005634 |
Component |
Nucleus |
IDA |
11278816, 17003263 |
GO:0005654 |
Component |
Nucleoplasm |
TAS |
|
GO:0005737 |
Component |
Cytoplasm |
IDA |
9990509, 11278816, 17003263 |
GO:0005829 |
Component |
Cytosol |
TAS |
|
GO:0006355 |
Process |
Regulation of transcription, DNA-templated |
IDA |
17003263 |
GO:0006355 |
Process |
Regulation of transcription, DNA-templated |
IMP |
15367689 |
GO:0006464 |
Process |
Cellular protein modification process |
TAS |
8576257 |
GO:0006511 |
Process |
Ubiquitin-dependent protein catabolic process |
IBA |
21873635 |
GO:0006511 |
Process |
Ubiquitin-dependent protein catabolic process |
TAS |
8563171, 8672131 |
GO:0008283 |
Process |
Cell population proliferation |
IMP |
18946090 |
GO:0016567 |
Process |
Protein ubiquitination |
IDA |
9990509, 21532592 |
GO:0016567 |
Process |
Protein ubiquitination |
TAS |
|
GO:0019899 |
Function |
Enzyme binding |
TAS |
8563171 |
GO:0031398 |
Process |
Positive regulation of protein ubiquitination |
IGI |
12628165 |
GO:0031625 |
Function |
Ubiquitin protein ligase binding |
IBA |
21873635 |
GO:0031625 |
Function |
Ubiquitin protein ligase binding |
IPI |
11278816, 12628165, 21532592 |
GO:0044770 |
Process |
Cell cycle phase transition |
IMP |
18946090 |
GO:0045893 |
Process |
Positive regulation of transcription, DNA-templated |
IEA |
|
GO:0051443 |
Process |
Positive regulation of ubiquitin-protein transferase activity |
IGI |
12628165 |
GO:0061631 |
Function |
Ubiquitin conjugating enzyme activity |
IBA |
21873635 |
GO:0061631 |
Function |
Ubiquitin conjugating enzyme activity |
IDA |
20061386 |
GO:0070979 |
Process |
Protein K11-linked ubiquitination |
IBA |
21873635 |
GO:0070979 |
Process |
Protein K11-linked ubiquitination |
IDA |
20061386 |
GO:0071383 |
Process |
Cellular response to steroid hormone stimulus |
IMP |
15367689 |
GO:0071385 |
Process |
Cellular response to glucocorticoid stimulus |
IDA |
17003263 |
GO:0097027 |
Function |
Ubiquitin-protein transferase activator activity |
IGI |
12628165 |
GO:1903955 |
Process |
Positive regulation of protein targeting to mitochondrion |
HMP |
24270810 |
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Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
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Protein
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UniProt ID |
P68036 |
Protein name |
Ubiquitin-conjugating enzyme E2 L3 (EC 2.3.2.23) (E2 ubiquitin-conjugating enzyme L3) (L-UBC) (UbcH7) (Ubiquitin carrier protein L3) (Ubiquitin-conjugating enzyme E2-F1) (Ubiquitin-protein ligase L3) |
Protein function |
Ubiquitin-conjugating enzyme E2 that specifically acts with HECT-type and RBR family E3 ubiquitin-protein ligases. Does not function with most RING-containing E3 ubiquitin-protein ligases because it lacks intrinsic E3-independent reactivity with |
PDB |
1C4Z
,
1FBV
,
3SQV
,
3SY2
,
4Q5E
,
4Q5H
,
5HPT
,
5TTE
,
5UDH
,
6CP2
,
6DJW
,
6DJX
,
6N13
,
6XXU
,
7B5L
,
7B5N
,
7OIK
,
7V8F
,
8EAZ
,
8EB0
|
Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF00179 |
UQ_con |
6 → 144 |
Ubiquitin-conjugating enzyme |
Domain |
|
Sequence |
|
Sequence length |
154 |
Interactions |
View interactions |
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
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Associated diseases
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Causal |
Disease name |
Disease term |
dbSNP ID |
References |
Alzheimer disease |
Alzheimer`s Disease |
rs63750215, rs28936379, rs63749851, rs63749884, rs28936380, rs63750048, rs63750579, rs63750264, rs63749964, rs63750671, rs281865161, rs63750066, rs63750399, rs63750734, rs63751039, rs63750973, rs63749810, rs63750643, rs193922916, rs63750306, rs63750590, rs63750526, rs63751235, rs661, rs63751037, rs63749885, rs63750231, rs63751229, rs63751272, rs63751223, rs63750391, rs63751163, rs281875357, rs63751141, rs63750082, rs121917807, rs63751399, rs63750265, rs63751144, rs63750886, rs63751068, rs121917808, rs63749891, rs63750083, rs63749824, rs63750577, rs267606983, rs63750218, rs63751287, rs63750900, rs145518263, rs63751475, rs63750450, rs63749805, rs63751278, rs63751106, rs63750004, rs63749806, rs63751024, rs63750248, rs63750779, rs63751139, rs63750219, rs63750298, rs63750687, rs63750851, rs1553268799, rs1561901881, rs1561905293, rs866101707, rs1566638673, rs63750009, rs1566656702, rs1566657804, rs1567885728, rs1568339995, rs1566630791, rs1555358260, rs63750964, rs1594998354, rs63751316 |
30805717 |
Arthritis |
Systemic onset juvenile chronic arthritis |
rs1594890601, rs1594882933, rs184370809, rs776489319, rs1594883470 |
23603761 |
Autoimmune diseases |
Autoimmune Diseases, AUTOIMMUNE DISEASE, MULTISYSTEM, INFANTILE-ONSET, 1, AUTOIMMUNE DISEASE, MULTISYSTEM, INFANTILE-ONSET, 2 |
rs41285370, rs869025224 |
21383967, 30595370, 30595370 |
Inflammatory bowel disease |
Inflammatory Bowel Diseases |
rs137853579, rs137853580, rs121909601, rs149491038, rs368287711, rs387907326, rs587777338, rs758439420, rs139868987, rs750447828, rs368138379, rs1329427406, rs1264862631, rs1192830343, rs1373354533, rs1419560997, rs1591263883, rs1989014468 |
23128233, 28067908, 26192919 |
Psoriasis |
Psoriasis |
rs281875215, rs587777763, rs281875213, rs281875212 |
26974007 |
Rheumatoid arthritis |
Rheumatoid Arthritis, Rheumatoid Arthritis, Systemic Juvenile |
rs3766379, rs3792876, rs2071592, rs3087456, rs587776843, rs1566328963, rs2240340, rs1557787212 |
27193031, 23603761 |
Systemic lupus erythematosus |
Systemic lupus erythematosus |
rs77571059, rs10954213, rs2070197, rs72556554, rs3219018, rs121912990, rs1575496354, rs7574865, rs1307379746, rs758750492, rs1575497576 |
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Unknown |
Disease name |
Disease term |
dbSNP ID |
References |
Ankylosing spondylitis |
Ankylosing spondylitis |
|
26974007, 23749187 |
Cholangitis |
Cholangitis, Sclerosing |
|
26974007 |
Crohn disease |
Crohn Disease |
rs2066847, rs2066844, rs886052047, rs5743265, rs111608429, rs104895438 |
26974007, 28067908, 21102463, 26192919 |
Immune system diseases |
Immune System Diseases |
|
21383967 |
Lupus erythematosus |
Lupus Erythematosus, Systemic |
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22476155, 19838193, 26502338, 23917156, 27399966, 27193031, 24091983, 22045845, 28714469, 23943494, 18204446 |
Oligoarticular arthritis |
Oligoarticular Juvenile Idiopathic Arthritis |
|
23603761 |
Pauciarticular chronic arthritis |
Juvenile pauciarticular chronic arthritis |
|
23603761 |
Seronegative polyarthritis |
Polyarticular Juvenile Idiopathic Arthritis, Rheumatoid Factor Negative |
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23603761 |
Psoriasis vulgaris |
Psoriasis vulgaris |
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26626624 |
Still disease |
Juvenile-Onset Still Disease |
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23603761 |
Ulcerative colitis |
Ulcerative Colitis |
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23511034, 26974007 |
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