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TMOD1 (tropomodulin 1)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
7111
Gene nameGene Name - the full gene name approved by the HGNC.
Tropomodulin 1
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
TMOD1
SynonymsGene synonyms aliases
D9S57E, ETMOD, TMOD
ChromosomeChromosome number
9
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
9q22.33
SummarySummary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the tropomodulin family. The encoded protein is an actin-capping protein that regulates tropomyosin by binding to its N-terminus, inhibiting depolymerization and elongation of the pointed end of actin filaments and thereby in
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT439420 hsa-miR-1185-2-3p HITS-CLIP 24374217
MIRT439421 hsa-miR-1185-1-3p HITS-CLIP 24374217
MIRT439419 hsa-miR-544a HITS-CLIP 24374217
MIRT439418 hsa-miR-412-3p HITS-CLIP 24374217
MIRT439420 hsa-miR-1185-2-3p HITS-CLIP 24374217
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0003779 Function Actin binding IDA 26370058
GO:0005523 Function Tropomyosin binding IBA 21873635
GO:0005829 Component Cytosol TAS
GO:0005856 Component Cytoskeleton IBA 21873635
GO:0005865 Component Striated muscle thin filament IBA 21873635
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID P28289
Protein name Tropomodulin-1 (Erythrocyte tropomodulin) (E-Tmod)
Protein function Blocks the elongation and depolymerization of the actin filaments at the pointed end (PubMed:38168645). The Tmod/TM complex contributes to the formation of the short actin protofilament, which in turn defines the geometry of the membrane skeleto
PDB 4PKG , 4PKH , 4PKI , 4Z8G , 4Z94 , 8F8T
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF03250 Tropomodulin
3 143
Tropomodulin
Family
Sequence
MSYRRELEKYRDLDEDEILGALTEEELRTLENELDELDPDNALLPAGLRQKDQTTKAPTG
PFKREELLDHLEKQAKEFKDREDLVPYTGEKRGKVWVPKQKPLDPVLESVTLEPELEEAL
ANASDAELCDIAAILGMHTLMSN
QQYYQALSSSSIMNKEGLNSVIKPTQYKPVPDEEPNS
TDVEETLERIKNNDPKLEEVNLNNIRNIPIPTLKAYAEALKENSYVKKFSIVGTRSNDPV
AYALAEMLKENKVLKTLNVESNFISGAGILRLVEALPYNTSLVEMKIDNQSQPLGNKVEM
EIVSMLEKNATLLKFGYHFTQQGPRLRASNAMMNNNDLVRKRRLADLTGPIIPKCRSGV
Sequence length 359
Interactions View interactions
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
 
KEGG
 
Reactome
  Cytoskeleton in muscle cells   Striated Muscle Contraction
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Intracranial aneurysm Intracranial Aneurysm rs1594095223 30823506
Leukemia Leukemia, Myelocytic, Acute rs121909646, rs121913488, rs587776834, rs752746786, rs869312821, rs767454740, rs1554564297, rs11978267, rs4132601 27903959
Prostate cancer Malignant neoplasm of prostate rs121909139, rs121909140, rs121909141, rs121909142, rs121909143, rs606231169, rs606231170, rs137852584, rs137852578, rs137852580, rs137852581, rs137852582 17199135
Unknown
Disease name Disease term dbSNP ID References
Barrett esophagus Barrett Esophagus rs41341748 27527254
Corpus luteum cyst Corpus Luteum Cyst 21239663
Esophageal cancer Adenocarcinoma Of Esophagus 27527254
Ovarian cysts Ovarian Cysts 21239663

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