SERPING1 (serpin family G member 1)
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Gene
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Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
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710 |
Gene nameGene Name - the full gene name approved by the HGNC.
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Serpin family G member 1 |
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
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SERPING1 |
SynonymsGene synonyms aliases
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C1IN, C1INH, C1NH, HAE1, HAE2 |
ChromosomeChromosome number
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11 |
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
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11q12.1 |
SummarySummary of gene provided in NCBI Entrez Gene.
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This gene encodes a highly glycosylated plasma protein involved in the regulation of the complement cascade. Its encoded protein, C1 inhibitor, inhibits activated C1r and C1s of the first complement component and thus regulates complement activation. It i |
SNPsSNP information provided by dbSNP.
|
SNP ID |
Visualize variation |
Clinical significance |
Consequence |
rs28940870 |
C>A,T |
Pathogenic, not-provided |
Coding sequence variant, missense variant |
rs112565881 |
G>A,T |
Pathogenic |
Splice donor variant |
rs121907947 |
G>A |
Pathogenic |
Coding sequence variant, missense variant |
rs121907948 |
G>A,C,T |
Not-provided, pathogenic |
Coding sequence variant, missense variant |
rs121907949 |
T>A |
Pathogenic |
Coding sequence variant, missense variant |
rs121907950 |
C>T |
Pathogenic |
Coding sequence variant, missense variant |
rs121907951 |
C>G |
Pathogenic |
Coding sequence variant, stop gained |
rs201363394 |
C>T |
Pathogenic |
Coding sequence variant, missense variant |
rs281875170 |
G>A |
Pathogenic, likely-pathogenic |
Coding sequence variant, missense variant |
rs606231141 |
->TGT |
Pathogenic |
Coding sequence variant, inframe indel |
rs763451792 |
T>C,G |
Pathogenic |
Missense variant, coding sequence variant |
rs778625408 |
G>A,T |
Pathogenic |
Missense variant, coding sequence variant, stop gained |
rs886041353 |
G>A |
Pathogenic |
Splice acceptor variant |
rs922149386 |
C>T |
Pathogenic |
Stop gained, coding sequence variant |
rs956390201 |
G>A,C |
Pathogenic |
Missense variant, coding sequence variant |
rs978962357 |
T>C |
Likely-pathogenic |
Coding sequence variant, missense variant |
rs1057520366 |
A>C |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs1064793350 |
C>T |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs1064793792 |
C>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs1064793917 |
AGTTCCA>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs1085307611 |
C>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs1554994665 |
G>T |
Likely-pathogenic |
Intron variant |
rs1554994909 |
G>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs1554995260 |
->T |
Pathogenic |
Coding sequence variant, frameshift variant |
rs1554995271 |
A>TCAGTGTCGTG |
Pathogenic |
Coding sequence variant, inframe indel, stop gained |
rs1554995774 |
T>C |
Likely-pathogenic |
Coding sequence variant, missense variant |
rs1554995860 |
C>G |
Pathogenic |
Coding sequence variant, stop gained |
rs1554996817 |
T>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs1554996819 |
->A |
Pathogenic |
Coding sequence variant, stop gained |
rs1554996833 |
GA>- |
Pathogenic, likely-pathogenic |
Coding sequence variant, frameshift variant |
rs1554996859 |
CAAGTTCC>A |
Likely-pathogenic |
Coding sequence variant, frameshift variant |
rs1565168898 |
A>C,G |
Pathogenic |
Missense variant, initiator codon variant |
rs1565169419 |
A>T |
Pathogenic |
Coding sequence variant, stop gained |
rs1565169621 |
TACC>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs1565170287 |
ATCC>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs1565170364 |
TC>AA |
Pathogenic |
Coding sequence variant, stop gained |
rs1565171906 |
C>T |
Pathogenic |
Coding sequence variant, stop gained |
rs1565173309 |
A>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs1565173405 |
T>A |
Pathogenic |
Coding sequence variant, stop gained |
rs1565174105 |
C>T |
Pathogenic |
Coding sequence variant, stop gained |
rs1590821401 |
G>- |
Likely-pathogenic |
Coding sequence variant, splice donor variant |
rs1590822296 |
AG>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs1590822371 |
T>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs1590822588 |
A>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs1590822719 |
AGACCAACATGG>- |
Likely-pathogenic |
Coding sequence variant, inframe deletion |
rs1590822739 |
T>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs1590823884 |
->C |
Pathogenic |
Coding sequence variant, frameshift variant |
rs1590826571 |
T>C |
Likely-pathogenic |
Coding sequence variant, missense variant |
rs1590826703 |
T>C |
Pathogenic |
Coding sequence variant, missense variant |
rs1590829609 |
C>T |
Pathogenic |
Coding sequence variant, stop gained |
rs1590829616 |
GCTGCAGCTCTCCCA>- |
Likely-pathogenic |
Coding sequence variant, inframe deletion |
rs1590829685 |
A>- |
Likely-pathogenic |
Coding sequence variant, frameshift variant |
rs1590829763 |
A>- |
Pathogenic |
Coding sequence variant, frameshift variant |
rs1590831385 |
->GAACTGAC |
Pathogenic |
Coding sequence variant, inframe insertion, stop gained |
rs1590831432 |
C>T |
Pathogenic |
Coding sequence variant, missense variant |
rs1590831492 |
T>- |
Likely-pathogenic |
Coding sequence variant, frameshift variant |
rs1590831545 |
G>A |
Pathogenic |
Coding sequence variant, stop gained |
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miRNAmiRNA information provided by mirtarbase database.
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Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
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GO ID |
Ontology |
Definition |
Evidence |
Reference |
GO:0001869 |
Process |
Negative regulation of complement activation, lectin pathway |
IDA |
10946292 |
GO:0002576 |
Process |
Platelet degranulation |
TAS |
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GO:0004867 |
Function |
Serine-type endopeptidase inhibitor activity |
IBA |
21873635 |
GO:0004867 |
Function |
Serine-type endopeptidase inhibitor activity |
IDA |
11527969 |
GO:0005515 |
Function |
Protein binding |
IPI |
10570951, 10946292, 16237761, 22046132, 22483117, 25910212 |
GO:0005576 |
Component |
Extracellular region |
NAS |
14718574 |
GO:0005576 |
Component |
Extracellular region |
TAS |
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GO:0005615 |
Component |
Extracellular space |
HDA |
16502470 |
GO:0005615 |
Component |
Extracellular space |
IBA |
21873635 |
GO:0006958 |
Process |
Complement activation, classical pathway |
IEA |
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GO:0007597 |
Process |
Blood coagulation, intrinsic pathway |
TAS |
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GO:0008015 |
Process |
Blood circulation |
TAS |
2365061, 2563376 |
GO:0010951 |
Process |
Negative regulation of endopeptidase activity |
IBA |
21873635 |
GO:0030449 |
Process |
Regulation of complement activation |
TAS |
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GO:0031093 |
Component |
Platelet alpha granule lumen |
TAS |
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GO:0042730 |
Process |
Fibrinolysis |
IEA |
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GO:0045087 |
Process |
Innate immune response |
IEA |
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GO:0062023 |
Component |
Collagen-containing extracellular matrix |
HDA |
25037231, 28675934 |
GO:0070062 |
Component |
Extracellular exosome |
HDA |
19056867, 23533145 |
GO:0072562 |
Component |
Blood microparticle |
HDA |
22516433 |
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Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
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Protein
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UniProt ID |
P05155 |
Protein name |
Plasma protease C1 inhibitor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor) (Serpin G1) |
Protein function |
Serine protease inhibitor, which acrs as a regulator of the classical complement pathway (PubMed:10946292, PubMed:11527969, PubMed:3458172, PubMed:6416294). Forms a proteolytically inactive stoichiometric complex with the C1r or C1s proteases (P |
PDB |
2OAY
,
5DU3
,
5DUQ
,
7AKV
,
8W18
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Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF00079 |
Serpin |
144 → 498 |
Serpin (serine protease inhibitor) |
Domain |
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Sequence |
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Sequence length |
500 |
Interactions |
View interactions |
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
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Associated diseases
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Causal |
Disease name |
Disease term |
dbSNP ID |
References |
Angioedema |
Angioedemas, Hereditary, Hereditary Angioedema Type II, Hereditary Angioedema Types I and II, Hereditary Angioedema Type I, Acquired angioedema, Hereditary angioedema type 1, Hereditary angioedema type 2 |
rs28940870, rs1554996819, rs1554996817, rs112565881, rs2135304804, rs121907951, rs281875174, rs281875178, rs281875168, rs281875170, rs281875171, rs1554995255, rs1554995860, rs886041353, rs978962357, rs1554995774, rs763451792, rs1554995271, rs1554996833, rs1554995260, rs1565169419, rs1565173405, rs1565168898, rs1590822296, rs1565169621, rs1565170287, rs1565170364, rs1565171906, rs1565173309, rs1565174105, rs922149386, rs1590822719, rs1590821401, rs1590822588, rs1590822739, rs1590823884, rs1590826571, rs1590829609, rs1590829616, rs1590829763, rs1590831385, rs1590831432, rs956390201, rs1590831545, rs1590829685, rs778625408, rs1582955358, rs1599142041, rs1945310324, rs1945307391, rs1945416520 |
9734886, 23634741, 23406939, 7883978, 19477491, 23866957, 23844784, 24456027, 18387221, 15806011, 1644161, 1644161, 15806011, 18387221, 18387221, 24456027, 2118657, 7883978, 29753808, 8172583, 28194776, 1451784, 1644161, 7814636, 12773530, 8755917, 3178731, 22994404, 2365061, 2296585, 15806011, 14635117, 1363816, 8529136, 16409206, 9734886, 23406939 |
Complement component deficiency |
Complement Component 4, Partial Deficiency Of, Complement deficiency disease |
rs387906509, rs1467298230, rs1022194067, rs774370086, rs121964922, rs372345940, rs121913052, rs121913053, rs460897, rs121913054, rs121913056, rs121913058, rs796052138, rs41286844, rs121909592, rs34000044, rs121909594, rs121909587, rs121909588, rs387906554, rs587776846, rs2135727106, rs460184, rs775967055, rs398122811, rs140813121, rs146187042, rs372968576, rs398122867, rs398122868, rs9332736, rs398124644, rs142881576, rs531103546, rs764871530, rs778518669, rs139491301, rs61469168, rs1554718962, rs1565789104, rs1579848888, rs779723422, rs867425110, rs770367814 |
7883978 |
Hereditary c1 esterase inhibitor deficiency |
Hereditary C1 esterase inhibitor deficiency - deficient factor, Hereditary C1 esterase inhibitor deficiency - dysfunctional factor |
rs121907947, rs28940870, rs121907949, rs606231141 |
24456027 |
Lung cancer |
Malignant neoplasm of lung |
rs121913530, rs121913529, rs878855122, rs1057519784, rs770315135 |
27935865 |
Narcolepsy |
Narcolepsy |
rs104894574, rs387906655 |
19629137 |
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