SYK (spleen associated tyrosine kinase)
|
Gene
|
Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
|
6850 |
Gene nameGene Name - the full gene name approved by the HGNC.
|
Spleen associated tyrosine kinase |
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
|
SYK |
SynonymsGene synonyms aliases
|
IMD82, p72-Syk |
ChromosomeChromosome number
|
9 |
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
|
9q22.2 |
SummarySummary of gene provided in NCBI Entrez Gene.
|
This gene encodes a member of the family of non-receptor type Tyr protein kinases. This protein is widely expressed in hematopoietic cells and is involved in coupling activated immunoreceptors to downstream signaling events that mediate diverse cellular r |
miRNAmiRNA information provided by mirtarbase database.
|
|
Transcription factors
|
Transcription factor |
Regulation |
Reference |
JUN |
Unknown |
22354960 |
|
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
|
GO ID |
Ontology |
Definition |
Evidence |
Reference |
GO:0001525 |
Process |
Angiogenesis |
IEA |
|
GO:0001784 |
Function |
Phosphotyrosine residue binding |
IMP |
12051764 |
GO:0001784 |
Function |
Phosphotyrosine residue binding |
IPI |
12051764, 20624904 |
GO:0001945 |
Process |
Lymph vessel development |
ISS |
|
GO:0002092 |
Process |
Positive regulation of receptor internalization |
IEA |
|
GO:0002223 |
Process |
Stimulatory C-type lectin receptor signaling pathway |
TAS |
|
GO:0002250 |
Process |
Adaptive immune response |
IBA |
21873635 |
GO:0002250 |
Process |
Adaptive immune response |
ISS |
|
GO:0002281 |
Process |
Macrophage activation involved in immune response |
IBA |
21873635 |
GO:0002281 |
Process |
Macrophage activation involved in immune response |
ISS |
|
GO:0002283 |
Process |
Neutrophil activation involved in immune response |
IBA |
21873635 |
GO:0002283 |
Process |
Neutrophil activation involved in immune response |
ISS |
|
GO:0002366 |
Process |
Leukocyte activation involved in immune response |
ISS |
|
GO:0002554 |
Process |
Serotonin secretion by platelet |
ISS |
|
GO:0004672 |
Function |
Protein kinase activity |
IDA |
18818202 |
GO:0004672 |
Function |
Protein kinase activity |
NAS |
12885943 |
GO:0004674 |
Function |
Protein serine/threonine kinase activity |
IDA |
23071339 |
GO:0004713 |
Function |
Protein tyrosine kinase activity |
EXP |
8629002, 8657103, 10648173, 17993265, 18818202, 22041900 |
GO:0004713 |
Function |
Protein tyrosine kinase activity |
IBA |
21873635 |
GO:0004713 |
Function |
Protein tyrosine kinase activity |
NAS |
28386764 |
GO:0004713 |
Function |
Protein tyrosine kinase activity |
TAS |
|
GO:0004715 |
Function |
Non-membrane spanning protein tyrosine kinase activity |
IBA |
21873635 |
GO:0004715 |
Function |
Non-membrane spanning protein tyrosine kinase activity |
IDA |
8163536 |
GO:0004715 |
Function |
Non-membrane spanning protein tyrosine kinase activity |
TAS |
|
GO:0005102 |
Function |
Signaling receptor binding |
IBA |
21873635 |
GO:0005178 |
Function |
Integrin binding |
IPI |
12885943 |
GO:0005515 |
Function |
Protein binding |
IPI |
7761456, 8627166, 8647200, 8657103, 8798676, 8810294, 9280292, 9698567, 11940607, 15536084, 16273093, 18273061, 19843936, 20133729, 20585042, 20713593, 21044950, 21516116, 22019427, 22624718, 23001182, 23299888, 24525236, 24728074, 25416956, 25605870, 25814554, 28086240, 31515488, 32 |
GO:0005524 |
Function |
ATP binding |
IEA |
|
GO:0005634 |
Component |
Nucleus |
IDA |
23071339 |
GO:0005737 |
Component |
Cytoplasm |
IDA |
23071339 |
GO:0005829 |
Component |
Cytosol |
IC |
8163536 |
GO:0005829 |
Component |
Cytosol |
TAS |
|
GO:0005886 |
Component |
Plasma membrane |
TAS |
|
GO:0006468 |
Process |
Protein phosphorylation |
IDA |
17681949 |
GO:0006606 |
Process |
Protein import into nucleus |
IMP |
23071339 |
GO:0007159 |
Process |
Leukocyte cell-cell adhesion |
IDA |
12885943 |
GO:0007169 |
Process |
Transmembrane receptor protein tyrosine kinase signaling pathway |
IBA |
21873635 |
GO:0007229 |
Process |
Integrin-mediated signaling pathway |
ISS |
|
GO:0007229 |
Process |
Integrin-mediated signaling pathway |
NAS |
12885943 |
GO:0007257 |
Process |
Activation of JUN kinase activity |
IEA |
|
GO:0009887 |
Process |
Animal organ morphogenesis |
TAS |
7477352 |
GO:0010543 |
Process |
Regulation of platelet activation |
ISS |
|
GO:0010803 |
Process |
Regulation of tumor necrosis factor-mediated signaling pathway |
IMP |
19151749 |
GO:0016032 |
Process |
Viral process |
IEA |
|
GO:0016170 |
Function |
Interleukin-15 receptor binding |
IPI |
15123770 |
GO:0018105 |
Process |
Peptidyl-serine phosphorylation |
IEA |
|
GO:0018108 |
Process |
Peptidyl-tyrosine phosphorylation |
ISS |
|
GO:0019370 |
Process |
Leukotriene biosynthetic process |
IEA |
|
GO:0019815 |
Component |
B cell receptor complex |
IEA |
|
GO:0019901 |
Function |
Protein kinase binding |
IEA |
|
GO:0019902 |
Function |
Phosphatase binding |
IEA |
|
GO:0030154 |
Process |
Cell differentiation |
IBA |
21873635 |
GO:0030168 |
Process |
Platelet activation |
TAS |
|
GO:0030593 |
Process |
Neutrophil chemotaxis |
IDA |
12885943 |
GO:0031234 |
Component |
Extrinsic component of cytoplasmic side of plasma membrane |
IBA |
21873635 |
GO:0031334 |
Process |
Positive regulation of protein-containing complex assembly |
IMP |
22267217 |
GO:0031623 |
Process |
Receptor internalization |
ISS |
|
GO:0032009 |
Component |
Early phagosome |
ISS |
|
GO:0032481 |
Process |
Positive regulation of type I interferon production |
IEA |
|
GO:0032725 |
Process |
Positive regulation of granulocyte macrophage colony-stimulating factor production |
IEA |
|
GO:0032733 |
Process |
Positive regulation of interleukin-10 production |
IMP |
19358895 |
GO:0032735 |
Process |
Positive regulation of interleukin-12 production |
IMP |
19358895 |
GO:0032752 |
Process |
Positive regulation of interleukin-3 production |
IEA |
|
GO:0032753 |
Process |
Positive regulation of interleukin-4 production |
ISS |
|
GO:0032755 |
Process |
Positive regulation of interleukin-6 production |
IMP |
19358895 |
GO:0032757 |
Process |
Positive regulation of interleukin-8 production |
IMP |
25251945 |
GO:0032760 |
Process |
Positive regulation of tumor necrosis factor production |
IMP |
19358895 |
GO:0032928 |
Process |
Regulation of superoxide anion generation |
ISS |
|
GO:0032930 |
Process |
Positive regulation of superoxide anion generation |
IMP |
19358895 |
GO:0032991 |
Component |
Protein-containing complex |
IDA |
23071339 |
GO:0033630 |
Process |
Positive regulation of cell adhesion mediated by integrin |
IBA |
21873635 |
GO:0033630 |
Process |
Positive regulation of cell adhesion mediated by integrin |
ISS |
|
GO:0035325 |
Function |
Toll-like receptor binding |
IEA |
|
GO:0038063 |
Process |
Collagen-activated tyrosine kinase receptor signaling pathway |
IEA |
|
GO:0038095 |
Process |
Fc-epsilon receptor signaling pathway |
TAS |
|
GO:0038096 |
Process |
Fc-gamma receptor signaling pathway involved in phagocytosis |
TAS |
|
GO:0038110 |
Process |
Interleukin-2-mediated signaling pathway |
TAS |
|
GO:0038156 |
Process |
Interleukin-3-mediated signaling pathway |
ISS |
|
GO:0042101 |
Component |
T cell receptor complex |
IDA |
8176201 |
GO:0042169 |
Function |
SH2 domain binding |
IEA |
|
GO:0042742 |
Process |
Defense response to bacterium |
ISS |
|
GO:0043280 |
Process |
Positive regulation of cysteine-type endopeptidase activity involved in apoptotic process |
IMP |
22267217 |
GO:0043306 |
Process |
Positive regulation of mast cell degranulation |
IBA |
21873635 |
GO:0043313 |
Process |
Regulation of neutrophil degranulation |
ISS |
|
GO:0043366 |
Process |
Beta selection |
IEA |
|
GO:0045087 |
Process |
Innate immune response |
IBA |
21873635 |
GO:0045087 |
Process |
Innate immune response |
ISS |
|
GO:0045579 |
Process |
Positive regulation of B cell differentiation |
IBA |
21873635 |
GO:0045579 |
Process |
Positive regulation of B cell differentiation |
IMP |
18369315 |
GO:0045588 |
Process |
Positive regulation of gamma-delta T cell differentiation |
IEA |
|
GO:0045780 |
Process |
Positive regulation of bone resorption |
ISS |
|
GO:0046638 |
Process |
Positive regulation of alpha-beta T cell differentiation |
IEA |
|
GO:0046641 |
Process |
Positive regulation of alpha-beta T cell proliferation |
IBA |
21873635 |
GO:0048514 |
Process |
Blood vessel morphogenesis |
ISS |
|
GO:0050731 |
Process |
Positive regulation of peptidyl-tyrosine phosphorylation |
IEA |
|
GO:0050764 |
Process |
Regulation of phagocytosis |
ISS |
|
GO:0050850 |
Process |
Positive regulation of calcium-mediated signaling |
IEA |
|
GO:0050853 |
Process |
B cell receptor signaling pathway |
IBA |
21873635 |
GO:0050853 |
Process |
B cell receptor signaling pathway |
ISS |
|
GO:0051090 |
Process |
Regulation of DNA-binding transcription factor activity |
IMP |
23071339 |
GO:0051712 |
Process |
Positive regulation of killing of cells of other organism |
IMP |
19358895 |
GO:0070372 |
Process |
Regulation of ERK1 and ERK2 cascade |
ISS |
|
GO:0071226 |
Process |
Cellular response to molecule of fungal origin |
ISS |
|
GO:0071404 |
Process |
Cellular response to low-density lipoprotein particle stimulus |
ISS |
|
GO:0071639 |
Process |
Positive regulation of monocyte chemotactic protein-1 production |
IMP |
25251945 |
GO:0090237 |
Process |
Regulation of arachidonic acid secretion |
ISS |
|
GO:0090330 |
Process |
Regulation of platelet aggregation |
IBA |
21873635 |
GO:0090330 |
Process |
Regulation of platelet aggregation |
ISS |
|
GO:0120162 |
Process |
Positive regulation of cold-induced thermogenesis |
ISS |
29235464 |
|
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
|
|
Protein
|
UniProt ID |
P43405 |
Protein name |
Tyrosine-protein kinase SYK (EC 2.7.10.2) (Spleen tyrosine kinase) (p72-Syk) |
Protein function |
Non-receptor tyrosine kinase which mediates signal transduction downstream of a variety of transmembrane receptors including classical immunoreceptors like the B-cell receptor (BCR). Regulates several biological processes including innate and ad |
PDB |
1A81
,
1CSY
,
1CSZ
,
1XBA
,
1XBB
,
1XBC
,
3BUW
,
3EMG
,
3FQE
,
3FQH
,
3FQS
,
3SRV
,
3TUB
,
3TUC
,
3TUD
,
3VF8
,
3VF9
,
4DFL
,
4DFN
,
4F4P
,
4FL1
,
4FL2
,
4FL3
,
4FYN
,
4FYO
,
4FZ6
,
4FZ7
,
4GFG
,
4I0R
,
4I0S
,
4I0T
,
4PUZ
,
4PV0
,
4PX6
,
4RSS
,
4RX7
,
4RX8
,
4RX9
,
4WNM
,
4XG2
,
4XG3
,
4XG4
,
4XG6
,
4XG7
,
4XG8
,
4XG9
,
4YJO
,
4YJP
,
4YJQ
,
4YJR
,
4YJS
|
Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF00017 |
SH2 |
15 → 92 |
SH2 domain |
Domain |
PF00017 |
SH2 |
168 → 244 |
SH2 domain |
Domain |
PF07714 |
PK_Tyr_Ser-Thr |
371 → 626 |
Protein tyrosine and serine/threonine kinase |
Domain |
|
Sequence |
|
Sequence length |
635 |
Interactions |
View interactions |
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
|
|
Associated diseases
|
Causal |
Disease name |
Disease term |
dbSNP ID |
References |
Esophagus neoplasm |
Malignant neoplasm of esophagus |
rs28934578, rs121918714, rs1567556006, rs1575166666 |
21642993 |
Melanoma |
melanoma |
rs121913315, rs121913323, rs137853080, rs137853081, rs121909232, rs121913388, rs104894094, rs1563902635, rs104894095, rs104894097, rs104894098, rs104894099, rs104894109, rs137854599, rs11547328, rs104894340, rs398123152, rs587780668, rs587782083, rs587782206, rs587782792, rs180177042, rs121913381, rs730881675, rs730881674, rs730881677, rs730881673, rs1800586, rs768966657, rs587778189, rs786204195, rs121913321, rs45476696, rs864622636, rs864622263, rs869025340, rs876660436, rs876658534, rs876658556, rs878853647, rs878853644, rs878853650, rs886041162, rs121913389, rs1057519852, rs121913384, rs121913387, rs1060501266, rs1060501263, rs1060501262, rs749714198, rs1060501265, rs559848002, rs1064794292, rs1131691187, rs1131691186, rs199907548, rs1554654052, rs1554656411, rs1554656624, rs1554653915, rs1554653956, rs1554656253, rs1554654224, rs754806883, rs1057520039, rs1563889584, rs1563889685, rs1287464120, rs1563888944, rs1563892715, rs1563889847, rs141798398, rs1587332338, rs1587340291, rs11552823, rs561034503, rs138677674, rs1819962958, rs1820531050 |
17145863 |
Mesothelioma |
Mesothelioma |
rs121907908, rs387906350, rs387906351 |
17659810 |
|
Unknown |
Disease name |
Disease term |
dbSNP ID |
References |
Dementia |
Dementia, Vascular |
|
23480133 |
Lymphocytic leukemia |
Chronic Lymphocytic Leukemia |
|
|
Malignant lymphoma, lymphocytic, intermediate differentiation |
Malignant lymphoma, lymphocytic, intermediate differentiation, diffuse |
|
|
|
|
|