SMPD1 (sphingomyelin phosphodiesterase 1)
|
Gene
|
Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
|
6609 |
Gene nameGene Name - the full gene name approved by the HGNC.
|
Sphingomyelin phosphodiesterase 1 |
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
|
SMPD1 |
SynonymsGene synonyms aliases
|
ASM, ASMASE, NPD |
ChromosomeChromosome number
|
11 |
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
|
11p15.4 |
SummarySummary of gene provided in NCBI Entrez Gene.
|
The protein encoded by this gene is a lysosomal acid sphingomyelinase that converts sphingomyelin to ceramide. The encoded protein also has phospholipase C activity. Defects in this gene are a cause of Niemann-Pick disease type A (NPA) and Niemann-Pick di |
SNPsSNP information provided by dbSNP.
|
SNP ID |
Visualize variation |
Clinical significance |
Consequence |
rs1803161 |
G>A,C |
Pathogenic, uncertain-significance |
Intron variant, missense variant, 5 prime UTR variant, coding sequence variant, non coding transcript variant |
rs120074117 |
G>A,C,T |
Likely-pathogenic, pathogenic |
Coding sequence variant, non coding transcript variant, missense variant |
rs120074118 |
GCC>- |
Pathogenic |
Coding sequence variant, non coding transcript variant, inframe deletion, 3 prime UTR variant |
rs120074119 |
G>A |
Likely-pathogenic |
Coding sequence variant, non coding transcript variant, missense variant, 3 prime UTR variant |
rs120074120 |
T>A |
Pathogenic |
Coding sequence variant, intron variant, 5 prime UTR variant, stop gained, non coding transcript variant |
rs120074121 |
G>A |
Pathogenic |
Coding sequence variant, non coding transcript variant, intron variant, missense variant |
rs120074122 |
G>A,T |
Likely-pathogenic, pathogenic |
Coding sequence variant, intron variant, 5 prime UTR variant, stop gained, missense variant, non coding transcript variant |
rs120074123 |
A>G |
Pathogenic |
Coding sequence variant, non coding transcript variant, intron variant, missense variant |
rs120074124 |
T>C |
Pathogenic |
Coding sequence variant, intron variant, 5 prime UTR variant, missense variant, non coding transcript variant |
rs120074125 |
T>G |
Pathogenic |
Coding sequence variant, non coding transcript variant, intron variant, missense variant |
rs120074126 |
C>T |
Likely-pathogenic, pathogenic |
Coding sequence variant, non coding transcript variant, missense variant |
rs120074127 |
C>G,T |
Pathogenic |
Coding sequence variant, stop gained, non coding transcript variant, missense variant |
rs120074128 |
C>A |
Pathogenic |
Coding sequence variant, intron variant, 5 prime UTR variant, missense variant, non coding transcript variant |
rs141387770 |
G>A |
Conflicting-interpretations-of-pathogenicity |
Coding sequence variant, intron variant, 5 prime UTR variant, missense variant, non coding transcript variant |
rs142787001 |
A>T |
Conflicting-interpretations-of-pathogenicity |
Coding sequence variant, non coding transcript variant, missense variant, 3 prime UTR variant |
rs143939609 |
G>A |
Conflicting-interpretations-of-pathogenicity |
Synonymous variant, coding sequence variant, intron variant, 5 prime UTR variant, non coding transcript variant |
rs144873307 |
G>A |
Likely-pathogenic, uncertain-significance |
Coding sequence variant, non coding transcript variant, missense variant |
rs148067213 |
G>A |
Conflicting-interpretations-of-pathogenicity |
Missense variant, intron variant, synonymous variant, coding sequence variant, non coding transcript variant |
rs148944108 |
G>A |
Uncertain-significance, benign, conflicting-interpretations-of-pathogenicity |
5 prime UTR variant, intron variant, synonymous variant, coding sequence variant, non coding transcript variant |
rs182812968 |
C>T |
Pathogenic, likely-pathogenic, pathogenic-likely-pathogenic |
Non coding transcript variant, missense variant, coding sequence variant |
rs199915216 |
C>A,T |
Likely-benign, conflicting-interpretations-of-pathogenicity |
Non coding transcript variant, coding sequence variant, missense variant, 3 prime UTR variant |
rs200652683 |
C>T |
Uncertain-significance, conflicting-interpretations-of-pathogenicity |
Non coding transcript variant, coding sequence variant, missense variant, 3 prime UTR variant |
rs200763423 |
G>A,C,T |
Pathogenic, likely-pathogenic |
Intron variant, 5 prime UTR variant, non coding transcript variant, missense variant, stop gained, coding sequence variant |
rs201550531 |
G>C,T |
Pathogenic |
Intron variant, non coding transcript variant, missense variant, stop gained, coding sequence variant, synonymous variant |
rs201659696 |
C>T |
Conflicting-interpretations-of-pathogenicity |
Non coding transcript variant, coding sequence variant, synonymous variant, 3 prime UTR variant |
rs202081954 |
C>A,G,T |
Uncertain-significance, conflicting-interpretations-of-pathogenicity |
Non coding transcript variant, coding sequence variant, intron variant, missense variant |
rs202206564 |
G>A,C |
Uncertain-significance, conflicting-interpretations-of-pathogenicity |
Non coding transcript variant, coding sequence variant, 5 prime UTR variant, missense variant |
rs202244080 |
G>A |
Uncertain-significance, conflicting-interpretations-of-pathogenicity |
Intron variant, 5 prime UTR variant, non coding transcript variant, missense variant, coding sequence variant |
rs267607073 |
C>A |
Pathogenic |
Non coding transcript variant, coding sequence variant, missense variant |
rs267607074 |
A>C |
Pathogenic |
Non coding transcript variant, coding sequence variant, missense variant |
rs267607075 |
C>A,T |
Pathogenic |
Non coding transcript variant, coding sequence variant, missense variant |
rs281860663 |
C>- |
Pathogenic |
Non coding transcript variant, coding sequence variant, 5 prime UTR variant, frameshift variant |
rs281860665 |
T>A,G |
Likely-pathogenic |
Non coding transcript variant, coding sequence variant, missense variant |
rs281860677 |
->TCCCCGCA |
Pathogenic |
Intron variant, frameshift variant, 5 prime UTR variant, non coding transcript variant, coding sequence variant |
rs369787650 |
C>T |
Conflicting-interpretations-of-pathogenicity |
Synonymous variant, coding sequence variant, non coding transcript variant, 3 prime UTR variant |
rs370048730 |
C>T |
Conflicting-interpretations-of-pathogenicity |
5 prime UTR variant, synonymous variant, coding sequence variant, non coding transcript variant |
rs370129081 |
G>A |
Likely-pathogenic |
Missense variant, coding sequence variant, non coding transcript variant, 3 prime UTR variant |
rs371837210 |
A>G,T |
Conflicting-interpretations-of-pathogenicity |
Missense variant, coding sequence variant, non coding transcript variant, 3 prime UTR variant |
rs372287825 |
A>G |
Uncertain-significance, likely-pathogenic |
Missense variant, coding sequence variant, intron variant, non coding transcript variant |
rs373940701 |
C>A,T |
Likely-pathogenic |
Missense variant, stop gained, 3 prime UTR variant, non coding transcript variant, coding sequence variant |
rs374604948 |
G>A |
Conflicting-interpretations-of-pathogenicity |
Non coding transcript variant, coding sequence variant, 5 prime UTR variant, synonymous variant, intron variant |
rs387906289 |
C>- |
Pathogenic |
Coding sequence variant, frameshift variant, intron variant, non coding transcript variant |
rs398123474 |
G>C |
Pathogenic-likely-pathogenic, pathogenic |
Splice acceptor variant, intron variant |
rs398123475 |
T>G |
Uncertain-significance, likely-pathogenic |
Missense variant, coding sequence variant, non coding transcript variant |
rs398123476 |
CT>- |
Pathogenic |
Coding sequence variant, frameshift variant, non coding transcript variant |
rs398123478 |
C>T |
Pathogenic, likely-pathogenic |
Stop gained, coding sequence variant, non coding transcript variant, 3 prime UTR variant |
rs398123479 |
G>C |
Pathogenic, likely-pathogenic |
Missense variant, non coding transcript variant, coding sequence variant, 5 prime UTR variant, intron variant |
rs528939343 |
T>C |
Conflicting-interpretations-of-pathogenicity |
Intron variant, non coding transcript variant |
rs555187617 |
C>T |
Conflicting-interpretations-of-pathogenicity |
Intron variant, synonymous variant, coding sequence variant, missense variant, non coding transcript variant |
rs559088058 |
G>A |
Conflicting-interpretations-of-pathogenicity |
Intron variant, missense variant, coding sequence variant, non coding transcript variant |
rs575601110 |
C>T |
Conflicting-interpretations-of-pathogenicity |
Coding sequence variant, 5 prime UTR variant, synonymous variant, non coding transcript variant |
rs587779408 |
G>A |
Pathogenic, likely-pathogenic |
Intron variant, 5 prime UTR variant, coding sequence variant, missense variant, non coding transcript variant |
rs727504165 |
C>- |
Pathogenic, likely-pathogenic |
Coding sequence variant, 5 prime UTR variant, non coding transcript variant, frameshift variant |
rs727504166 |
T>C |
Pathogenic, likely-pathogenic |
Intron variant, 5 prime UTR variant, coding sequence variant, missense variant, non coding transcript variant |
rs727504167 |
T>- |
Pathogenic |
Intron variant, 5 prime UTR variant, frameshift variant, coding sequence variant, non coding transcript variant |
rs747143343 |
A>G |
Pathogenic, likely-pathogenic |
Missense variant, coding sequence variant, non coding transcript variant |
rs747342458 |
G>A,C |
Pathogenic |
Coding sequence variant, non coding transcript variant, synonymous variant, missense variant, 3 prime UTR variant |
rs748165078 |
C>-,CC |
Likely-pathogenic |
Frameshift variant, coding sequence variant, non coding transcript variant, intron variant, 5 prime UTR variant |
rs748411156 |
AT>- |
Pathogenic |
Frameshift variant, coding sequence variant, non coding transcript variant |
rs749780769 |
T>A |
Uncertain-significance, conflicting-interpretations-of-pathogenicity |
Coding sequence variant, non coding transcript variant, intron variant, 5 prime UTR variant, missense variant |
rs750157176 |
C>-,CC |
Pathogenic |
Frameshift variant, 5 prime UTR variant, coding sequence variant, non coding transcript variant |
rs750187574 |
A>C,G |
Conflicting-interpretations-of-pathogenicity |
Coding sequence variant, non coding transcript variant, intron variant, 5 prime UTR variant, synonymous variant, missense variant |
rs750779804 |
A>C |
Pathogenic, likely-pathogenic |
Coding sequence variant, non coding transcript variant, intron variant, 5 prime UTR variant, missense variant |
rs751269562 |
T>C |
Likely-pathogenic |
Missense variant, 5 prime UTR variant, coding sequence variant, non coding transcript variant |
rs752148586 |
G>A,T |
Likely-pathogenic |
Coding sequence variant, non coding transcript variant, intron variant, 5 prime UTR variant, missense variant |
rs753508874 |
C>A,T |
Pathogenic-likely-pathogenic, likely-pathogenic |
Missense variant, coding sequence variant, non coding transcript variant |
rs755160837 |
C>G,T |
Pathogenic |
Coding sequence variant, non coding transcript variant, intron variant, missense variant, stop gained |
rs755182589 |
G>A |
Conflicting-interpretations-of-pathogenicity |
Intron variant, synonymous variant, coding sequence variant, non coding transcript variant |
rs756031857 |
G>T |
Likely-pathogenic |
3 prime UTR variant, coding sequence variant, stop gained, non coding transcript variant |
rs756366019 |
C>-,CC |
Pathogenic |
Frameshift variant, intron variant, non coding transcript variant, coding sequence variant, 5 prime UTR variant |
rs759389193 |
GT>- |
Pathogenic |
3 prime UTR variant, coding sequence variant, frameshift variant, non coding transcript variant |
rs761308217 |
C>G |
Pathogenic, likely-pathogenic |
Missense variant, coding sequence variant, intron variant, non coding transcript variant |
rs763566905 |
G>A |
Likely-pathogenic, uncertain-significance |
Missense variant, coding sequence variant, non coding transcript variant |
rs769904764 |
C>T |
Likely-pathogenic |
Coding sequence variant, non coding transcript variant, synonymous variant, missense variant |
rs770962157 |
A>- |
Pathogenic |
3 prime UTR variant, coding sequence variant, non coding transcript variant, frameshift variant |
rs771336819 |
T>A,C |
Uncertain-significance, pathogenic |
Non coding transcript variant, synonymous variant, stop gained, missense variant, coding sequence variant |
rs779528546 |
T>C |
Likely-pathogenic |
Missense variant, non coding transcript variant, coding sequence variant |
rs781535659 |
->C |
Likely-pathogenic |
Frameshift variant, non coding transcript variant, coding sequence variant, 5 prime UTR variant, intron variant |
rs786204506 |
G>A |
Likely-pathogenic |
Stop gained, non coding transcript variant, coding sequence variant, 5 prime UTR variant |
rs786204514 |
CT>- |
Likely-pathogenic |
Frameshift variant, non coding transcript variant, coding sequence variant, intron variant |
rs786204694 |
TT>- |
Pathogenic-likely-pathogenic |
Frameshift variant, non coding transcript variant, coding sequence variant, 5 prime UTR variant, intron variant |
rs786204733 |
->T |
Likely-pathogenic |
Frameshift variant, non coding transcript variant, coding sequence variant, 5 prime UTR variant, intron variant |
rs794727252 |
TGTTGAGTGGGCTGGGCCCAGCC>- |
Pathogenic, likely-pathogenic |
Frameshift variant, non coding transcript variant, coding sequence variant, 5 prime UTR variant, intron variant |
rs794727629 |
A>G,T |
Conflicting-interpretations-of-pathogenicity, uncertain-significance |
Missense variant, non coding transcript variant, coding sequence variant |
rs797044797 |
T>C |
Pathogenic |
Missense variant, non coding transcript variant, coding sequence variant, 5 prime UTR variant |
rs797044798 |
G>C |
Pathogenic |
Missense variant, 5 prime UTR variant, non coding transcript variant, coding sequence variant, intron variant |
rs797044799 |
C>A,G |
Pathogenic |
Missense variant, 5 prime UTR variant, non coding transcript variant, coding sequence variant, intron variant |
rs797044800 |
C>A |
Pathogenic |
Missense variant, non coding transcript variant, coding sequence variant, intron variant |
rs868423827 |
C>T |
Pathogenic-likely-pathogenic, likely-pathogenic |
Stop gained, non coding transcript variant, coding sequence variant, 5 prime UTR variant |
rs875989832 |
G>- |
Pathogenic |
Frameshift variant, non coding transcript variant, coding sequence variant, 5 prime UTR variant, intron variant |
rs875989833 |
->T |
Pathogenic |
Frameshift variant, non coding transcript variant, coding sequence variant, 5 prime UTR variant, intron variant |
rs875989834 |
CCGTGTGTACCAA>- |
Pathogenic |
Stop gained, frameshift variant, non coding transcript variant, coding sequence variant |
rs875989835 |
->C |
Pathogenic |
Frameshift variant, non coding transcript variant, coding sequence variant, 5 prime UTR variant, intron variant |
rs875989836 |
T>C |
Pathogenic |
Missense variant, non coding transcript variant, 3 prime UTR variant, coding sequence variant |
rs875989837 |
G>A |
Pathogenic, not-provided |
Missense variant, 5 prime UTR variant, non coding transcript variant, coding sequence variant, intron variant |
rs886043098 |
G>- |
Pathogenic, likely-pathogenic |
Frameshift variant, non coding transcript variant, coding sequence variant, 5 prime UTR variant |
rs889113421 |
C>G |
Conflicting-interpretations-of-pathogenicity |
Coding sequence variant, non coding transcript variant, 5 prime UTR variant, synonymous variant |
rs943924098 |
C>G |
Likely-pathogenic |
3 prime UTR variant, stop gained, non coding transcript variant, coding sequence variant |
rs989639224 |
C>A,T |
Likely-pathogenic |
Coding sequence variant, non coding transcript variant, missense variant, intron variant, 5 prime UTR variant |
rs1018556947 |
->C |
Pathogenic |
Non coding transcript variant, coding sequence variant, frameshift variant, 5 prime UTR variant, intron variant |
rs1057516403 |
TT>- |
Pathogenic, likely-pathogenic |
Non coding transcript variant, 3 prime UTR variant, coding sequence variant, frameshift variant |
rs1057516432 |
TC>- |
Pathogenic-likely-pathogenic |
Non coding transcript variant, intron variant, coding sequence variant, frameshift variant |
rs1057516454 |
G>A,C,T |
Pathogenic, pathogenic-likely-pathogenic, likely-pathogenic |
Splice acceptor variant |
rs1057516722 |
G>A |
Likely-pathogenic |
Non coding transcript variant, 5 prime UTR variant, stop gained, coding sequence variant |
rs1057516854 |
G>A,T |
Pathogenic, pathogenic-likely-pathogenic, likely-pathogenic |
Non coding transcript variant, splice acceptor variant |
rs1057516931 |
C>T |
Likely-pathogenic |
Non coding transcript variant, 5 prime UTR variant, stop gained, coding sequence variant |
rs1057516949 |
GACT>- |
Likely-pathogenic |
Non coding transcript variant, 5 prime UTR variant, coding sequence variant, frameshift variant |
rs1057517086 |
TT>- |
Likely-pathogenic |
Non coding transcript variant, 5 prime UTR variant, stop gained, coding sequence variant |
rs1057517098 |
T>- |
Likely-pathogenic |
Non coding transcript variant, 5 prime UTR variant, coding sequence variant, frameshift variant |
rs1057517195 |
C>T |
Pathogenic |
Intron variant, non coding transcript variant, missense variant, 5 prime UTR variant, coding sequence variant |
rs1057517200 |
GT>- |
Likely-pathogenic |
Non coding transcript variant, coding sequence variant, frameshift variant |
rs1057517345 |
CC>G |
Likely-pathogenic |
Non coding transcript variant, intron variant, coding sequence variant, frameshift variant |
rs1057517390 |
TCTG>- |
Likely-pathogenic |
Non coding transcript variant, stop gained, coding sequence variant |
rs1057517826 |
T>G |
Likely-pathogenic |
Non coding transcript variant, 3 prime UTR variant, coding sequence variant, missense variant |
rs1064795484 |
G>T |
Likely-pathogenic |
Intron variant, non coding transcript variant, stop gained, 5 prime UTR variant, coding sequence variant |
rs1205990349 |
C>T |
Likely-pathogenic |
Coding sequence variant, stop gained, 5 prime UTR variant, non coding transcript variant |
rs1225462507 |
T>A,C |
Likely-pathogenic |
Splice donor variant |
rs1342372980 |
C>G,T |
Pathogenic |
Non coding transcript variant, coding sequence variant, intron variant, missense variant |
rs1422720020 |
->G |
Likely-pathogenic |
Frameshift variant, intron variant, coding sequence variant, non coding transcript variant |
rs1423504237 |
C>A,T |
Likely-pathogenic |
Intron variant, coding sequence variant, synonymous variant, missense variant, non coding transcript variant, 5 prime UTR variant |
rs1428487333 |
G>A,T |
Likely-pathogenic |
Coding sequence variant, missense variant, non coding transcript variant, stop gained, 5 prime UTR variant |
rs1437508852 |
CT>- |
Likely-pathogenic |
Non coding transcript variant, frameshift variant, 3 prime UTR variant, coding sequence variant |
rs1470998208 |
G>A |
Likely-pathogenic |
Stop gained, intron variant, non coding transcript variant, coding sequence variant, missense variant |
rs1554933746 |
A>- |
Conflicting-interpretations-of-pathogenicity |
Coding sequence variant, non coding transcript variant, frameshift variant, 5 prime UTR variant |
rs1554933751 |
C>T |
Likely-pathogenic |
Coding sequence variant, non coding transcript variant, stop gained, 5 prime UTR variant |
rs1554933780 |
G>A |
Likely-pathogenic |
Coding sequence variant, non coding transcript variant, stop gained, 5 prime UTR variant |
rs1554934193 |
G>A |
Pathogenic |
Stop gained, 5 prime UTR variant, coding sequence variant, intron variant, non coding transcript variant |
rs1554934210 |
G>- |
Likely-pathogenic |
Stop gained, 5 prime UTR variant, coding sequence variant, intron variant, non coding transcript variant |
rs1554934212 |
G>A |
Likely-pathogenic |
Stop gained, 5 prime UTR variant, coding sequence variant, intron variant, non coding transcript variant |
rs1554934241 |
->T |
Pathogenic |
5 prime UTR variant, coding sequence variant, intron variant, non coding transcript variant, frameshift variant |
rs1554934309 |
TCCTCACTGACCTGCACTGGGATCATGACTACCT>- |
Likely-pathogenic |
5 prime UTR variant, coding sequence variant, intron variant, non coding transcript variant, frameshift variant |
rs1554934406 |
G>T |
Likely-pathogenic |
Stop gained, 5 prime UTR variant, coding sequence variant, intron variant, non coding transcript variant |
rs1554935136 |
G>A |
Likely-pathogenic |
Coding sequence variant, non coding transcript variant, missense variant |
rs1554935254 |
->TTCTGGCCAGGTATGAGAACACCCTGGCTGCTCAGTTCTTTGGCCACACTCATGTGGATGAATTTGAGGTCTTCTATGATGAAGAGACTCTGAGCCGGC |
Likely-pathogenic |
Coding sequence variant, non coding transcript variant, splice acceptor variant, intron variant |
rs1554935273 |
G>- |
Likely-pathogenic |
Coding sequence variant, non coding transcript variant, frameshift variant |
rs1554935285 |
C>- |
Likely-pathogenic |
Coding sequence variant, non coding transcript variant, frameshift variant |
rs1554935439 |
C>G |
Likely-pathogenic |
Coding sequence variant, non coding transcript variant, missense variant, stop gained |
rs1554935555 |
T>C |
Likely-pathogenic |
Coding sequence variant, non coding transcript variant, missense variant, 3 prime UTR variant |
rs1554935600 |
C>AA |
Likely-pathogenic |
Coding sequence variant, non coding transcript variant, frameshift variant, 3 prime UTR variant |
rs1554935610 |
G>A |
Likely-pathogenic |
Coding sequence variant, non coding transcript variant, stop gained, 3 prime UTR variant |
rs1554935746 |
C>- |
Likely-pathogenic |
Coding sequence variant, non coding transcript variant, frameshift variant, 3 prime UTR variant |
rs1564927308 |
C>- |
Pathogenic |
Coding sequence variant, non coding transcript variant, frameshift variant, 3 prime UTR variant |
rs1590735238 |
->G |
Pathogenic |
5 prime UTR variant, coding sequence variant, frameshift variant, non coding transcript variant |
rs1590735307 |
TGCTGGCGCT>CGC |
Pathogenic |
5 prime UTR variant, coding sequence variant, frameshift variant, non coding transcript variant |
rs1590739350 |
G>A |
Likely-pathogenic |
Non coding transcript variant, 5 prime UTR variant, coding sequence variant, missense variant, intron variant |
rs1590743683 |
->G |
Pathogenic |
Coding sequence variant, frameshift variant, intron variant, non coding transcript variant |
|
miRNAmiRNA information provided by mirtarbase database.
|
|
Transcription factors
|
Transcription factor |
Regulation |
Reference |
SP1 |
Activation |
10224156 |
|
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
|
GO ID |
Ontology |
Definition |
Evidence |
Reference |
GO:0001778 |
Process |
Plasma membrane repair |
IDA |
20530211 |
GO:0004767 |
Function |
Sphingomyelin phosphodiesterase activity |
IDA |
9660788, 21098024, 22573858 |
GO:0004767 |
Function |
Sphingomyelin phosphodiesterase activity |
TAS |
|
GO:0005515 |
Function |
Protein binding |
IPI |
16787399, 21157428 |
GO:0005615 |
Component |
Extracellular space |
IBA |
21873635 |
GO:0005615 |
Component |
Extracellular space |
IDA |
8702487, 9660788, 16787399, 17303575, 20530211, 20807762, 21098024, 22573858, 27659707 |
GO:0005764 |
Component |
Lysosome |
IBA |
21873635 |
GO:0005764 |
Component |
Lysosome |
IDA |
9660788, 16787399, 18815062, 20530211, 20807762, 20956541, 21098024, 27659707 |
GO:0005768 |
Component |
Endosome |
IDA |
20956541 |
GO:0005886 |
Component |
Plasma membrane |
IDA |
20956541 |
GO:0006684 |
Process |
Sphingomyelin metabolic process |
TAS |
7670466 |
GO:0006685 |
Process |
Sphingomyelin catabolic process |
IBA |
21873635 |
GO:0006685 |
Process |
Sphingomyelin catabolic process |
IDA |
18815062, 20807762, 22573858 |
GO:0006687 |
Process |
Glycosphingolipid metabolic process |
TAS |
|
GO:0007165 |
Process |
Signal transduction |
TAS |
7670466 |
GO:0007399 |
Process |
Nervous system development |
TAS |
7670466 |
GO:0008081 |
Function |
Phosphoric diester hydrolase activity |
IBA |
21873635 |
GO:0008203 |
Process |
Cholesterol metabolic process |
IEA |
|
GO:0008270 |
Function |
Zinc ion binding |
IDA |
8702487, 9660788 |
GO:0009615 |
Process |
Response to virus |
IDA |
22573858 |
GO:0010212 |
Process |
Response to ionizing radiation |
IMP |
8706124 |
GO:0016798 |
Function |
Hydrolase activity, acting on glycosyl bonds |
IEA |
|
GO:0023021 |
Process |
Termination of signal transduction |
IMP |
19279008 |
GO:0034340 |
Process |
Response to type I interferon |
IDA |
20807762 |
GO:0034612 |
Process |
Response to tumor necrosis factor |
IDA |
20807762 |
GO:0034644 |
Process |
Cellular response to UV |
IDA |
17303575 |
GO:0035307 |
Process |
Positive regulation of protein dephosphorylation |
IMP |
19279008 |
GO:0036019 |
Component |
Endolysosome |
IDA |
17303575 |
GO:0042060 |
Process |
Wound healing |
IDA |
20530211 |
GO:0042220 |
Process |
Response to cocaine |
IEA |
|
GO:0042493 |
Process |
Response to drug |
IEA |
|
GO:0042599 |
Component |
Lamellar body |
IEA |
|
GO:0043065 |
Process |
Positive regulation of apoptotic process |
IMP |
8706124 |
GO:0043202 |
Component |
Lysosomal lumen |
TAS |
|
GO:0043407 |
Process |
Negative regulation of MAP kinase activity |
IMP |
19279008 |
GO:0045807 |
Process |
Positive regulation of endocytosis |
IDA |
20530211 |
GO:0046513 |
Process |
Ceramide biosynthetic process |
IBA |
21873635 |
GO:0046513 |
Process |
Ceramide biosynthetic process |
IDA |
17303575, 18815062, 20807762 |
GO:0046513 |
Process |
Ceramide biosynthetic process |
IMP |
8706124, 19279011 |
GO:0046718 |
Process |
Viral entry into host cell |
IDA |
22573858 |
GO:0061750 |
Function |
Acid sphingomyelin phosphodiesterase activity |
IBA |
21873635 |
GO:0061750 |
Function |
Acid sphingomyelin phosphodiesterase activity |
IDA |
8702487, 17303575, 18815062, 20807762 |
GO:0070062 |
Component |
Extracellular exosome |
HDA |
23533145 |
GO:0070555 |
Process |
Response to interleukin-1 |
IDA |
20807762 |
GO:0071277 |
Process |
Cellular response to calcium ion |
IDA |
20530211 |
|
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
|
|
Protein
|
UniProt ID |
P17405 |
Protein name |
Sphingomyelin phosphodiesterase (EC 3.1.4.12) (EC 3.1.4.3) (Acid sphingomyelinase) (aSMase) [Cleaved into: Sphingomyelin phosphodiesterase, processed form] |
Protein function |
Converts sphingomyelin to ceramide (PubMed:12563314, PubMed:1840600, PubMed:18815062, PubMed:25339683, PubMed:25920558, PubMed:27659707, PubMed:33163980). Exists as two enzymatic forms that arise from alternative trafficking of a single protein |
PDB |
5I81
,
5I85
,
5I8R
,
5JG8
|
Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF00149 |
Metallophos |
201 → 463 |
Calcineurin-like phosphoesterase |
Domain |
|
Sequence |
|
Sequence length |
631 |
Interactions |
View interactions |
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
|
|
Associated diseases
|
Causal |
Disease name |
Disease term |
dbSNP ID |
References |
Anemia |
Iron-Refractory Iron Deficiency Anemia |
rs118204044, rs118204045, rs118204046, rs121918330, rs869320719, rs869312029, rs121918332, rs869320724, rs767094129, rs786205058, rs786205059, rs137853119, rs137853120, rs137853121, rs1384933966, rs137853122, rs137853123, rs786205060, rs267607121, rs121908584, rs80338697, rs80338699, rs120074166, rs120074167, rs1050828, rs74575103, rs137852314, rs5030868, rs137852316, rs137852317, rs137852318, rs137852319, rs137852320, rs137852321, rs137852322, rs137852323, rs137852324, rs72554665, rs387906468, rs5030872, rs137852326, rs137852333, rs137852327, rs137852328, rs137852329, rs137852330, rs137852331, rs137852332, rs137852334, rs137852335, rs137852336, rs137852339, rs76645461, rs137852340, rs137852341, rs78478128, rs137852343, rs137852344, rs137852345, rs587776730, rs137852346, rs137852347, rs137852349, rs2070404412, rs2070350038, rs2070350009, rs137852303, rs137852304, rs33946267, rs34378160, rs33933298, rs11549407, rs35724775, rs34598529, rs41469945, rs267607201, rs80338694, rs80338696, rs387907018, rs398123546, rs78365220, rs587777100, rs587777101, rs483352840, rs869312752, rs765487627, rs1557229599, rs1557230040, rs1555524842, rs782090947, rs1358275550, rs1557229736, rs1557230573, rs1556323334, rs1233124208, rs1293528130, rs146864395, rs1595503440, rs1603411214, rs137852325, rs1575247302, rs1603411177, rs1336651679, rs782322505 |
|
Apraxia |
Apraxias |
rs121908377, rs121908378, rs1135401820, rs1178491246, rs1584969672 |
|
Attention deficit hyperactivity disorder |
Attention deficit hyperactivity disorder |
rs120074176, rs786205019 |
|
Cholelithiasis |
Cholelithiasis |
rs121918440, rs72552778, rs387906528, rs759202962, rs377160065, rs1051861187, rs757693457, rs752563752 |
|
Developmental delay |
Global developmental delay, Gross motor development delay |
rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291, rs886041382, rs1057518991, rs1057518699, rs753254213, rs748294403, rs762552974, rs1135401795, rs1553121073, rs1553122926, rs1364690005, rs1554086554, rs1554210415, rs1554168326, rs1554776342, rs1553873247, rs1567860112, rs779009256, rs1557447255, rs1564568350, rs780011005, rs1597464953, rs1200336864, rs1569513017, rs1587459606, rs1570332505, rs748888652, rs1575155995, rs2087029320, rs1589669105, rs1601769604, rs1184981709, rs749201074 |
|
Kidney disease |
Kidney Diseases |
rs74315342, rs749740335, rs757649673, rs112417755, rs35138315 |
26980705 |
Liver failure |
Liver Failure |
rs118203990, rs118203991, rs118203992, rs387907022, rs201861847, rs796065037, rs759315662, rs368196005, rs796052121, rs369437593, rs367683258, rs766314948, rs368085185, rs770446752, rs753039116, rs776797592, rs1490906786, rs1562849964, rs759960319, rs776597537, rs375350359, rs1573008071, rs1601977105, rs1174791046, rs1019313682 |
|
Mental retardation |
Intellectual Disability |
rs5742905, rs267607136, rs267607137, rs2131714307, rs267607038, rs267607042, rs80338685, rs137853127, rs80338815, rs28940893, rs387906309, rs121908096, rs121908099, rs587784365, rs121918315, rs121918316, rs397515320, rs121434489, rs1585215916, rs267607233, rs267606752, rs137852214, rs606231193, rs132630297, rs80338758, rs137852815, rs122455132, rs28935171, rs122453113, rs122445108, rs28934904, rs28934908, rs28935468, rs61748421, rs121918624, rs202060209, rs80338708, rs113994198, rs199422192, rs387906635, rs1554770064, rs1057519611, rs1060499526, rs387906636, rs1057519612, rs281875189, rs281875322, rs387906799, rs387906804, rs875989800, rs797045262, rs387906845, rs387906846, rs876657378, rs281875227, rs281875228, rs281875229, rs281875230, rs387906861, rs370667926, rs387906932, rs387906943, rs1557612719, rs387907190, rs387907191, rs2126499522, rs587776908, rs1560982564, rs80359505, rs398123009, rs587776929, rs587776930, rs397514555, rs398122824, rs398122825, rs397514556, rs2147483647, rs587776937, rs397514627, rs397514655, rs397514656, rs730882192, rs1587520018, rs1581995953, rs1554121970, rs1581987445, rs397514670, rs376395543, rs137854128, rs397509411, rs397509412, rs397514741, rs398122394, rs879255516, rs397518483, rs398122406, rs398122412, rs398123561, rs200667343, rs587777162, rs587777202, rs62507350, rs587777219, rs587777225, rs587777226, rs587779750, rs587777326, rs587777334, rs281875332, rs587780470, rs587780474, rs587780486, rs587777378, rs587777406, rs587777408, rs587777409, rs587777411, rs587777522, rs527236034, rs527236035, rs267608571, rs267608382, rs267608597, rs61753979, rs61751444, rs267608493, rs587777644, rs587777645, rs587777646, rs587777703, rs587779388, rs606231266, rs606231267, rs672601340, rs606231268, rs672601341, rs606231269, rs672601342, rs606231270, rs606231271, rs606231272, rs606231273, rs587784566, rs587784092, rs587783749, rs587783747, rs587783640, rs587783483, rs606231456, rs606231457, rs606231458, rs606231459, rs672601370, rs672601369, rs672601371, rs672601367, rs672601366, rs672601365, rs672601364, rs672601363, rs672601362, rs672601376, rs672601377, rs672601378, rs724159949, rs724159950, rs724159948, rs724159956, rs724159953, rs727502860, rs727502861, rs730882197, rs749995448, rs786205143, rs794726770, rs1135401808, rs786205583, rs786205595, rs786205859, rs794727792, rs794727928, rs794729221, rs797044519, rs797044523, rs797044521, rs797044524, rs797044526, rs797044522, rs797044520, rs794727642, rs796052719, rs781746113, rs796052510, rs796052733, rs796052724, rs796052728, rs796052676, rs796053353, rs796053366, rs796053368, rs1555103986, rs1555110818, rs796052571, rs1555110843, rs796052626, rs796052618, rs796053290, rs796052217, rs672601368, rs797045164, rs797044961, rs797044962, rs200070245, rs797044963, rs869320675, rs869320676, rs797045012, rs752746786, rs797044885, rs797044925, rs797044854, rs797044849, rs797044930, rs797044901, rs797044918, rs797044884, rs797045177, rs797045178, rs797045050, rs797045036, rs797045053, rs797045047, rs797045037, rs797045042, rs797045041, rs879255261, rs782397980, rs797045263, rs797045264, rs797045655, rs797045586, rs545185248, rs797046031, rs797046028, rs797046029, rs797046030, rs797045249, rs797045529, rs797045952, rs797045984, rs797045540, rs797045539, rs797045989, rs863224930, rs869025202, rs863225264, rs863225077, rs876661308, rs869025222, rs864309560, rs758252808, rs745756308, rs869025286, rs869025287, rs869025578, rs143038880, rs869025579, rs869025580, rs869025581, rs869312704, rs869312674, rs869312677, rs869312689, rs869312693, rs869312698, rs869312708, rs869312711, rs869312826, rs869312825, rs869312824, rs869312823, rs758432471, rs869312821, rs761993070, rs869312844, rs869312842, rs869312843, rs869312841, rs869312847, rs869320632, rs869312955, rs773432002, rs869320713, rs869320772, rs869320773, rs879255270, rs875989848, rs875989849, rs1716457622, rs2108414289, rs878854401, rs875989786, rs1085307109, rs1085307108, rs876657679, rs876661167, rs876661076, rs876661055, rs876661219, rs876661064, rs876661151, rs876661041, rs200440467, rs876661295, rs878853045, rs878853143, rs878853142, rs878853149, rs1555910048, rs878853152, rs878853146, rs878853145, rs878853141, rs878853151, rs878853144, rs878853148, rs878853147, rs878853251, rs878853269, rs879253762, rs886037841, rs879253888, rs879253931, rs879254016, rs879255618, rs879255619, rs879255620, rs886037847, rs879255621, rs886039332, rs746177928, rs886039520, rs886041003, rs886041058, rs750035706, rs886041059, rs886041060, rs886041061, rs886041090, rs886041088, rs886041089, rs886041095, rs886041097, rs886041989, rs886041944, rs886041692, rs886041593, rs886041687, rs886041207, rs886041309, rs886041239, rs886041448, rs138336847, rs149644940, rs886041295, rs886041521, rs886041125, rs886042041, rs886041238, rs886041469, rs886041197, rs886041291, rs886041658, rs886041705, rs886041876, rs139716296, rs1057516030, rs1057517408, rs749655461, rs141179774, rs370916968, rs1057517676, rs1057517933, rs1057517708, rs1057518352, rs1057518183, rs1057518474, rs1057518204, rs1057517825, rs1057518796, rs1057518961, rs1057518772, rs1057518988, rs1057519004, rs1057518700, rs772450541, rs371310428, rs1057519019, rs1057519491, rs1057519546, rs1057519560, rs1057519565, rs1057519400, rs1057519402, rs1057519405, rs1057519593, rs1057519594, rs1057519628, rs1556912828, rs1060505029, rs1060505030, rs147001633, rs1057519947, rs1057519617, rs1057524832, rs774592932, rs797045045, rs1039571136, rs1555910821, rs1060499626, rs1060499655, rs1554770185, rs1060499936, rs1060501153, rs1060501151, rs1064792984, rs1060503378, rs1060503386, rs1060503383, rs1060500046, rs1064792999, rs1060505033, rs1064796564, rs1064797002, rs1064793161, rs150802299, rs1064796830, rs1064794996, rs1064795444, rs1064796034, rs1064796403, rs1064794979, rs1064796765, rs1064793539, rs760933323, rs1064793546, rs1064796406, rs1064796367, rs780441716, rs1064794894, rs1064796023, rs1064797355, rs1085307484, rs1064794935, rs1085307547, rs1131690804, rs757511770, rs1131691875, rs1131691979, rs398122823, rs1131691866, rs1131692159, rs1131692228, rs1131692154, rs113331868, rs1554121872, rs1554121875, rs926027867, rs1554122123, rs1554122129, rs1287121256, rs1554122526, rs1554123982, rs1554385102, rs1554385111, rs1554385305, rs1554386687, rs1554389088, rs1554402092, rs1554434435, rs1135401778, rs1135401760, rs1135401770, rs1135401771, rs1135401768, rs1135401779, rs1135401805, rs1135401797, rs1135401799, rs1135401816, rs1135401823, rs1135401824, rs1555769968, rs1135401825, rs1135401955, rs1135401956, rs1135401957, rs1135401958, rs1554129040, rs1554150543, rs1553188463, rs1553146165, rs1485978447, rs1361547443, rs750079325, rs369692236, rs1554231836, rs749188610, rs1554122735, rs1554689877, rs1174482090, rs781053477, rs1554623112, rs1555409836, rs1555411305, rs770014321, rs1555984461, rs1555990958, rs762292772, rs1554944271, rs1057524157, rs1485749468, rs1555984343, rs1293450628, rs373584239, rs1553722309, rs1553738686, rs1376334317, rs1553722294, rs1553283831, rs1554120589, rs1555985554, rs1555877287, rs1555411378, rs750922282, rs1553264873, rs1554263326, rs1554264268, rs1554263626, rs1554263625, rs766614772, rs1553620494, rs1555050158, rs1555050165, rs1555050171, rs1555050174, rs765556214, rs1402086660, rs1554645052, rs1555661648, rs1293246328, rs749494995, rs775592405, rs1553265189, rs1553242856, rs1553247374, rs1553241570, rs1553997065, rs1553998565, rs1380822792, rs1555028154, rs1555023232, rs1553194155, rs1553130904, rs1553152590, rs1553567864, rs1553638614, rs120074160, rs1554486894, rs1554767754, rs1554843977, rs1555443581, rs1555443600, rs1555439545, rs1555525088, rs770680174, rs1555889130, rs373178770, rs1555985532, rs1553519853, rs781325598, rs1410587479, rs1553638086, rs150259543, rs1554093891, rs1554121228, rs1554120498, rs1554121189, rs1212517874, rs1554770628, rs1555979158, rs1554770054, rs771610568, rs1451230055, rs1554770624, rs1555906707, rs1555906768, rs1555906781, rs1555907620, rs1555907623, rs1555907626, rs1555907653, rs1555907864, rs1554094145, rs1554202698, rs1554200722, rs773327091, rs1555607621, rs1555604778, rs1555607159, rs1555607682, rs1553364018, rs1553324416, rs1555411394, rs1554102556, rs1554122363, rs1555705966, rs1555103971, rs1555408401, rs1554461593, rs1554304254, rs1554120978, rs1047509819, rs1555982601, rs767774867, rs1554789246, rs1555111511, rs1555950676, rs1555954380, rs1555985649, rs1553194162, rs1553518509, rs1274633498, rs1554274371, rs1554122252, rs1554122458, rs1554122729, rs1554297905, rs1554776342, rs1554770046, rs1554770667, rs1554792556, rs1452715535, rs1555444885, rs1555534147, rs1427624649, rs1555611722, rs1555744282, rs1555706391, rs1178702025, rs1555984102, rs1554770589, rs1554121443, rs1559791842, rs1559824939, rs1555889127, rs1236702036, rs1553510280, rs1553511175, rs1553511226, rs1554150552, rs1554275163, rs1554201137, rs1553517991, rs1553518511, rs1553517984, rs1553518752, rs1554119814, rs1554122293, rs1554122341, rs1554122689, rs1554770243, rs1554770444, rs1557045250, rs959316981, rs1556270312, rs1553270640, rs978179634, rs1554093884, rs1491240980, rs1555943484, rs1554121453, rs1334099693, rs1554048616, rs1555660806, rs1555644480, rs1555651572, rs1567844992, rs1567855081, rs1567855669, rs1567855704, rs1567856045, rs1567856331, rs1567860075, rs1567860112, rs1567860640, rs1567860891, rs754919272, rs1567860919, rs1567861468, rs1567861489, rs1567861501, rs1567861894, rs1567863732, rs1567864750, rs1567877108, rs1567878511, rs758785463, rs1553808301, rs1553245038, rs1553789166, rs1553813646, rs1553631860, rs1554121265, rs1554770262, rs1555034768, rs1555984433, rs779009256, rs1553994814, rs1553996086, rs1553996072, rs1553270599, rs1553153291, rs760262127, rs1554119274, rs1554121878, rs1554387293, rs1554385203, rs757077698, rs750612085, rs1554776500, rs1564360978, rs1554776933, rs1554776938, rs1565278132, rs1567368243, rs1558478047, rs375695605, rs1558479778, rs1558501648, rs1565240833, rs114727354, rs1557591264, rs1557620758, rs1559099927, rs1561788984, rs369459721, rs1563831738, rs1562159088, rs1562159562, rs1562159599, rs1559094754, rs1559328283, rs755634856, rs1561784687, rs1554122296, rs1561789313, rs1562720119, rs1564363665, rs1561697465, rs1561785003, rs1561787845, rs1561789215, rs1554122305, rs1561784553, rs1561784560, rs1561787690, rs1554122888, rs749632782, rs1567139896, rs1569370887, rs1569371303, rs1564493599, rs1561875779, rs1569146542, rs1569146649, rs1275489527, rs1560115921, rs1468772495, rs749969789, rs1560108090, rs1569376809, rs1569355102, rs1560103306, rs1564365418, rs1559855453, rs1562928193, rs1558149913, rs1253072668, rs141976414, rs1558371790, rs1557898800, rs1567758622, rs1567844041, rs1567844114, rs1567920106, rs1567920209, rs138247472, rs1567974030, rs1567995650, rs1283838287, rs1568003569, rs1568006217, rs1568018905, rs1562505675, rs1561783309, rs1555980234, rs1559087186, rs1560966086, rs1560330387, rs769471341, rs1562493608, rs1562505335, rs1554121861, rs1554122200, rs1562957809, rs1568097623, rs1391600900, rs1568234874, rs1568235086, rs1555990955, rs1567870541, rs1557570794, rs1562869207, rs1571818248, rs1431778557, rs369691608, rs1595808957, rs1597665063, rs1597846084, rs1603401125, rs1603350606, rs1601946481, rs1601932069, rs1602880906, rs1602308324, rs1574554519, rs1573882268, rs1603198937, rs1558148010, rs1558498928, rs1569459580, rs1569380375, rs1560062082, rs1557889974, rs1558414255, rs756429763, rs781663444, rs1569016820, rs1569017025, rs1569017160, rs1557612048, rs1568504941, rs1581987022, rs1576983339, rs1599892470, rs1265340906, rs1602284689, rs1574949440, rs1576220938, rs1576280892, rs1576288424, rs1574459612, rs1574511051, rs1575654528, rs1577094794, rs1294683568, rs771819481, rs1580984895, rs1581338441, rs1580988138, rs1581980317, rs1581986872, rs1554121207, rs1581987268, rs1581987476, rs1581987885, rs763770519, rs1581991929, rs1581992099, rs1581992998, rs1581995453, rs1554122242, rs1581996778, rs1581997228, rs1588735247, rs1555980467, rs1555985742, rs1601319086, rs1601970168, rs1574451881, rs876661168, rs1576994053, rs1573589807, rs1581036396, rs1601267617, rs1572531830, rs1573483715, rs1590954686, rs1601315812, rs1573965358, rs1573972562, rs529087882, rs1570609440, rs1598940393, rs1575333081, rs1576028676, rs1596476657, rs1599375711, rs1603290366, rs1603060007, rs1603069440, rs1592939069, rs1591612223, rs2062994512, rs373701249, rs1600471396, rs1600501018, rs1600504088, rs1600514073, rs748436953, rs765723607, rs758170522, rs1561785045, rs1357591960, rs1591609136, rs1596891223, rs1579370234, rs2047850664, rs1579109565, rs1870202051, rs1574887674, rs778229060, rs1572531281, rs1570622663, rs1573501865, rs1576086299, rs1576164991, rs1574907198, rs1576656734, rs1554121438, rs1581995425, rs1581996813, rs1582001015, rs1588324025, rs1591371152, rs1590008294, rs1590956245, rs1590028691, rs1591606580, rs1591611001, rs1591612317, rs1591612370, rs763436882, rs997044541, rs1595897117, rs747706524, rs1579377990, rs1201878175, rs1894051550, rs1572531730, rs1579576029, rs1577017863, rs752545577, rs1582461267, rs1589460606, rs1588727276, rs1598620094, rs1599368323, rs1600082188, rs1601319352, rs1598226304, rs2076013475, rs2076017638, rs1600596180, rs1554121932, rs1680676671, rs1570607996, rs1382444181, rs1570640673, rs1574994308, rs1596667777, rs1602226289, rs1595629181, rs1595609005, rs1227643933, rs1572705473, rs1570621899, rs1722830922, rs1575094649, rs1417035592, rs1581997098, rs1589457762, rs1598211790, rs758726258, rs1601071971, rs863224922, rs1586692481, rs1586692548, rs1586692551, rs1580988074, rs1594129609, rs1588732344, rs1579368865, rs1586660389, rs1586660370, rs1586660338, rs1586657848, rs1586660381, rs1791701214, rs752676391, rs1680673822, rs758098717, rs1726676630, rs762288077, rs1759964009, rs1760905766, rs1761021165, rs1554121934, rs2055849544, rs1049773, rs587784300, rs1861628072, rs1761241410, rs1064797322, rs1948652423, rs2059194330, rs1777174302, rs2054280202, rs2081190512, rs772665884, rs1400164869, rs1861593395, rs1760897843, rs1761087122, rs1388355040, rs2068797192, rs1777175608, rs376898131 |
|
Neuronal ceroid lipofuscinosis |
CEROID LIPOFUSCINOSIS, NEURONAL, 6 |
rs118203975, rs118203976, rs118203977, rs267607235, rs140948465, rs1740291234, rs386833969, rs104894385, rs104894386, rs121908292, rs267606738, rs1555274312, rs119455953, rs119455954, rs119455955, rs56144125, rs119455956, rs28940573, rs119455957, rs119455958, rs104894064, rs28940569, rs104894060, rs137852883, rs1555468634, rs121434286, rs267606737, rs104894483, rs397515352, rs774543080, rs121908080, rs786205067, rs137852695, rs137852696, rs137852697, rs137852698, rs137852699, rs137852700, rs137852701, rs137852702, rs63749877, rs121912789, rs121912790, rs786205105, rs154774634, rs587776892, rs387907246, rs386833624, rs386833626, rs386833625, rs386833627, rs386833628, rs386833629, rs386833630, rs386833632, rs386833633, rs386833634, rs386833635, rs386833636, rs386833637, rs386833638, rs386833641, rs386833642, rs386833643, rs386833644, rs386833645, rs386833646, rs386833647, rs386833648, rs386833649, rs386833650, rs386833651, rs386833652, rs386833653, rs148412181, rs386833654, rs386833655, rs386833656, rs386833657, rs386833658, rs386833659, rs386833660, rs386833661, rs386833663, rs386833664, rs386833665, rs386833666, rs386833667, rs386833668, rs386833669, rs386833671, rs386833694, rs386833695, rs386833696, rs386833697, rs386833698, rs386833699, rs386833700, rs386833701, rs386833702, rs386833703, rs386833704, rs386833705, rs386833706, rs386833707, rs386833708, rs386833709, rs386833710, rs386833712, rs386833713, rs386833714, rs386833715, rs386833717, rs386833720, rs386833721, rs386833722, rs386833724, rs386833725, rs386833726, rs386833728, rs386833729, rs386833730, rs386833731, rs386833732, rs386833735, rs386833736, rs386833737, rs386833739, rs386833740, rs386833741, rs386833742, rs386833743, rs386833744, rs386833963, rs386833964, rs386833965, rs386833966, rs386833967, rs386833970, rs386833971, rs386833972, rs386833973, rs386833974, rs386833975, rs386833978, rs386833979, rs386833980, rs386833981, rs386833982, rs386833983, rs386834123, rs386834124, rs386834125, rs386834126, rs386834128, rs386834130, rs386834132, rs386834133, rs386834135, rs34238807, rs386834138, rs386834139, rs397514731, rs397514732, rs753084727, rs587778809, rs154774640, rs154774639, rs121908197, rs121908198, rs121908199, rs121908200, rs121908201, rs121908203, rs121908202, rs121908195, rs121908204, rs121908205, rs121908209, rs121908207, rs104895127, rs63750411, rs587779397, rs587780315, rs724159970, rs727502800, rs727502801, rs724159971, rs746645358, rs786204553, rs786204753, rs778232650, rs786204644, rs794727955, rs794729218, rs796052925, rs796052923, rs796052927, rs558274487, rs796052752, rs144495588, rs1554901472, rs750428882, rs796053439, rs763162812, rs756564767, rs202189057, rs759080581, rs746085696, rs546989392, rs143781303, rs796052356, rs796052351, rs796052335, rs797045136, rs797045137, rs765097897, rs864309505, rs869025274, rs869312751, rs1085307087, rs878853322, rs878853325, rs878853929, rs878855053, rs878855331, rs553522118, rs748710466, rs886041568, rs886041487, rs886041546, rs1057516575, rs1057516889, rs1057517401, rs1057516447, rs1057517049, rs1057517192, rs1057517368, rs1057517112, rs747204624, rs1057516867, rs1057516582, rs756267448, rs1057516579, rs1057516511, rs1057516264, rs1057516319, rs113019349, rs1057517313, rs1057516945, rs752164603, rs1057516366, rs1057516667, rs1057516814, rs780198002, rs1057517134, rs1057516390, rs764495616, rs750935331, rs1057516677, rs1057516267, rs771788391, rs1057517350, rs1057516335, rs1057517287, rs1057517215, rs1057516343, rs777625354, rs764051026, rs559155109, rs1064796787, rs139842473, rs1064794233, rs181995380, rs1064795153, rs752612332, rs1131691676, rs1131691539, rs1555438255, rs1555058286, rs1555274005, rs1555468632, rs200348035, rs1265044710, rs1439582451, rs751696703, rs761621368, rs143730802, rs1554901580, rs1554902052, rs1553950197, rs200319160, rs143657539, rs1554901523, rs1555274338, rs1555273604, rs1555273881, rs1216139602, rs762226836, rs1553167863, rs1553166135, rs1553166147, rs1553167430, rs1349528345, rs1553166499, rs1553166337, rs1553167415, rs1553167474, rs1553167479, rs1554451504, rs746397087, rs1554449028, rs759830733, rs1554449124, rs554042394, rs1554451484, rs1554448874, rs1554448924, rs1554449047, rs1554449136, rs1554901463, rs1184563885, rs1554902043, rs763961289, rs1407106889, rs1554901576, rs1554901731, rs1424116749, rs1554901784, rs1554902216, rs779615685, rs1554902085, rs764790770, rs1555274343, rs1555274369, rs1555273567, rs1555274365, rs1555273609, rs1555274344, rs1555274373, rs1555274387, rs1451777867, rs762902907, rs756522171, rs1555438212, rs1555438443, rs1555468374, rs1555469452, rs1555467473, rs1418997146, rs1555273882, rs1478660606, rs1555273992, rs1555274014, rs1555274337, rs142456044, rs1555469159, rs758921701, rs1555469089, rs1555469477, rs1554901898, rs1554902217, rs1564855860, rs1564854729, rs1460276679, rs1560776422, rs556661896, rs868732642, rs1564855725, rs1566219136, rs1381427322, rs1557714302, rs1593914689, rs1302326945, rs1570470281, rs1570476221, rs775699005, rs1578912362, rs750162094, rs759664259, rs1589947644, rs1012449574, rs1570467252, rs778875017, rs1578794927, rs1578912759, rs1314967038, rs1465284719, rs1595816465, rs1595816474, rs1596563048, rs1565311875, rs2046113301, rs1578889355, rs776253867, rs1649597261, rs1649901192, rs749315686, rs1801297484, rs764256845, rs1242337070, rs2034349431, rs1380684360, rs1648444864, rs1739594685, rs1736369601, rs1739482158, rs1471253353, rs2046243804, rs1845791308, rs1397197980, rs2046158549 |
|
Niemann-pick disease |
Niemann-Pick Disease, Type A, Niemann-Pick Disease, Type B, Niemann-Pick Disease, Type E, Niemann-Pick disease type B, Niemann-Pick disease type A |
rs28942105, rs120074130, rs797044431, rs28942106, rs120074131, rs80358257, rs80358259, rs80358254, rs120074134, rs786200877, rs28942108, rs786200878, rs120074136, rs786200879, rs120074117, rs120074119, rs267607073, rs120074120, rs120074121, rs120074123, rs120074124, rs387906289, rs120074125, rs120074126, rs120074127, rs120074128, rs267607075, rs267607074, rs80358260, rs80358268, rs80358266, rs11694, rs104894457, rs104894458, rs80358253, rs80358258, rs80358262, rs80358263, rs80358267, rs80358264, rs80358265, rs398123474, rs398123476, rs182812968, rs398123478, rs398123479, rs281860677, rs587779408, rs483352886, rs483352888, rs483352893, rs727504166, rs727504165, rs727504167, rs543206298, rs369368181, rs786204506, rs786204733, rs786204694, rs786204514, rs753508874, rs370129081, rs758902805, rs200444084, rs786204455, rs143124972, rs786204512, rs139751448, rs372030650, rs794727252, rs120074118, rs769904764, rs797044797, rs747143343, rs875989833, rs875989835, rs875989832, rs875989837, rs875989834, rs771336819, rs879253740, rs377130051, rs770321568, rs886043098, rs759826138, rs1057516949, rs1057516722, rs1057517098, rs1057516931, rs868423827, rs1057517086, rs1057517195, rs748165078, rs989639224, rs120074122, rs750779804, rs1057517345, rs1057516432, rs1057516454, rs1057517390, rs1057516854, rs1057517200, rs943924098, rs373940701, rs1057516403, rs369098773, rs376213990, rs1057517455, rs762124334, rs1057516462, rs759075595, rs1057517826, rs757475924, rs1057517978, rs1554935254, rs750323164, rs886044580, rs1554935136, rs774943545, rs780592540, rs1342372980, rs756366019, rs773941375, rs1554934193, rs1428599096, rs1225462507, rs1554934212, rs1554934309, rs764317969, rs1554935555, rs1554935600, rs1554935610, rs281860663, rs1428487333, rs1554933746, rs750157176, rs1422720020, rs1554935273, rs1554935669, rs751269562, rs757934797, rs1554935439, rs756031857, rs1554935746, rs1205990349, rs1554933751, rs1554933780, rs1554934210, rs1423504237, rs1554934406, rs1554935285, rs1437508852, rs1555345616, rs1555346368, rs777654308, rs1555345873, rs1555346369, rs753419933, rs746715353, rs1555632003, rs753768576, rs202140203, rs749012588, rs1261939149, rs1555635957, rs377515417, rs794727629, rs745777805, rs765729815, rs770962157, rs1564923612, rs759389193, rs201550531, rs281860665, rs767899043, rs768299417, rs750292546, rs1590735238, rs1590735307, rs781535659, rs1590739350, rs1018556947, rs752148586, rs1470998208, rs755160837, rs779528546, rs748411156, rs1848015403, rs1319643225, rs2086689501 |
22818240, 12712061, 1391960, 8053910, 26913189, 8693491, 27338287, 16264060, 22796693, 15221801, 28600779, 15612058, 12369017, 17360762, 15877209, 27238910, 12694237, 17011332, 7762557, 23430949, 16151905, 21098024, 26084044, 1618760, 24446175, 8407868, 18815062, 16642440, 19405096, 27604308, 16434659, 20386867, 16010684, 23188845, 15545621, 26499107, 23252888, 25834946, 2023926, 1840600, 8664904, 1885770, 23356216, 10694919, 9266408, 8680412, 14681755, 17876723, 24767253, 12556236, 1718266, 16623786, 8499909, 15241805, 26851525, 23430884, 18625664, 15305357, 26169695, 15234149, 18052040, 8401540, 8225311, 23412609, 23430512, 27725636, 12607113, 23535491, 24718843, 27659707, 15221801, 22796693, 15877209, 12556236, 21621718, 23430512, 2023926, 1391960, 16623786, 17011332, 15241805, 26499107, 16472269, 26981555, 9266408, 20386867, 18815062, 21454466, 1885770, 16642440, 16010684, 22613662, 1301192, 23252888, 28600779, 8401540, 12694237, 17876723, 22818240, 12712061, 10694919, 19405096, 8664904, 23188845, 12369017, 8680412, 27338287, 23356216, 19050888, 8051942, 24767253, 1618760, 21502868, 26084044, 27604308, 8225311, 15234149, 15545621, 26913189, 25920558, 12607113 |
Nystagmus |
Nystagmus |
rs137852207, rs137852208, rs1928435502, rs137852209, rs137852210, rs1929191668, rs137852211, rs137852212, rs2124209414, rs387906720, rs387906721, rs1602791884, rs786205896 |
|
Osteoporosis |
Osteoporosis |
rs72658152, rs72667023, rs587776916, rs72656370, rs768615287 |
|
Sphingomyelinase deficiency |
Niemann-Pick Diseases |
rs28940897, rs28942105, rs797044431, rs28942106, rs80358257, rs80358259, rs80358254, rs120074134, rs120074135, rs28942107, rs786200877, rs80358252, rs28942108, rs786200878, rs120074136, rs786200879, rs387906289, rs104894458, rs80358253, rs80358258, rs398123284, rs483352883, rs483352885, rs483352886, rs483352879, rs483352887, rs483352888, rs483352889, rs483352890, rs483352882, rs483352881, rs483352884, rs483352880, rs543206298, rs730880963, rs369368181, rs758902805, rs200444084, rs786204455, rs786204586, rs143124972, rs786204714, rs786204641, rs786204512, rs764472245, rs139751448, rs372030650, rs794727897, rs863224902, rs777286835, rs876661319, rs377130051, rs768999208, rs751951695, rs886041356, rs886042268, rs886042270, rs770321568, rs759826138, rs750095738, rs369098773, rs1057516647, rs1057517149, rs1057517194, rs781261962, rs1057516603, rs550562774, rs376213990, rs1057517197, rs1057517455, rs1057517077, rs1057516813, rs1057516950, rs756853895, rs762124334, rs1057516260, rs752409181, rs1057516749, rs1057517186, rs1057516462, rs759075595, rs1057517005, rs778878523, rs1057518613, rs757475924, rs1057517978, rs113371321, rs372445155, rs1057518711, rs917070773, rs1064794009, rs750323164, rs886044580, rs1064795718, rs1555638409, rs1555637255, rs1555631982, rs1555632994, rs774943545, rs780592540, rs775629081, rs1298238512, rs1555633454, rs1555631998, rs773941375, rs1555637139, rs1428599096, rs1555637232, rs1555632971, rs1555633361, rs753419933, rs1555631653, rs1555631888, rs1555631957, rs746715353, rs775915490, rs1555633309, rs1555631571, rs758231839, rs1555634513, rs1555634690, rs1555632003, rs1555632977, rs753768576, rs1555634236, rs202140203, rs1555637164, rs749012588, rs1555641027, rs770580241, rs1555645630, rs1555633118, rs1555633326, rs1555634422, rs1055204017, rs1555642347, rs1555631610, rs1555631642, rs1555632182, rs771806960, rs761910746, rs1261939149, rs1555634508, rs1555635957, rs377515417, rs1555638833, rs1555642296, rs751249367, rs745777805, rs1567977251, rs765729815, rs1567965488, rs756366019, rs1598954455, rs772898831, rs768299417, rs750292546, rs1169032037, rs1160114136, rs1599011473, rs1598942578, rs755160837, rs2058596611, rs2058574038, rs2058616798, rs2058768195, rs2058769608, rs2058949697, rs2059233403, rs2058678962, rs2059231880, rs144973225 |
15877209, 12369017, 15545621, 12694237, 17011332, 25920558, 14681755, 12631268 |
|
Unknown |
Disease name |
Disease term |
dbSNP ID |
References |
Bipolar disorder |
Bipolar Disorder |
|
|
Cirrhosis |
Cirrhosis |
rs119465999, rs144369314, rs8056684, rs112053857, rs75998507 |
|
Coronary arteriosclerosis |
Coronary Arteriosclerosis |
|
|
Dwarfism |
Dwarfism |
|
|
Hypersplenism |
Hypersplenism |
|
|
Immune thrombocytopenic purpura |
Immune thrombocytopenic purpura |
|
|
Liver neoplasms |
Liver neoplasms |
|
|
Lung diseases |
Lung Diseases, Interstitial |
|
|
Lupus erythematosus |
Lupus Erythematosus, Systemic |
|
|
Major affective disorder |
MAJOR AFFECTIVE DISORDER 2, MAJOR AFFECTIVE DISORDER 1, MAJOR AFFECTIVE DISORDER 4, MAJOR AFFECTIVE DISORDER 6, MAJOR AFFECTIVE DISORDER 7, MAJOR AFFECTIVE DISORDER 8, MAJOR AFFECTIVE DISORDER 9 |
rs1601436804 |
|
Mental depression |
Depressive disorder |
rs587778876, rs587778877 |
|
Nervous system diseases |
Peripheral Nervous System Diseases |
|
|
Niemann-pick disease, protracted neurovisceral |
NIEMANN-PICK DISEASE, INTERMEDIATE, PROTRACTED NEUROVISCERAL (disorder) |
|
|
Osteopenia |
Osteopenia |
|
|
Promyelocytic leukemia |
Acute Promyelocytic Leukemia |
|
|
Sea-blue histiocytosis |
Sea-Blue Histiocyte Syndrome |
|
|
Specific learning disorder |
Specific learning disability |
rs1057519497 |
|
Xanthomatosis |
Xanthomatosis |
|
|
|
|
|