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SLC6A8 (solute carrier family 6 member 8)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
6535
Gene nameGene Name - the full gene name approved by the HGNC.
Solute carrier family 6 member 8
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
SLC6A8
SynonymsGene synonyms aliases
CCDS1, CRT, CRT-1, CRT1, CRTR, CT1, CTR5
ChromosomeChromosome number
X
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
Xq28
SummarySummary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is a plasma membrane protein whose function is to transport creatine into and out of cells. Defects in this gene can result in X-linked creatine deficiency syndrome. Multiple transcript variants encoding different isoforms
SNPsSNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs2872524 G>A Conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
rs80338739 CTT>- Pathogenic, likely-pathogenic Coding sequence variant, 5 prime UTR variant, inframe deletion
rs80338740 TTC>- Pathogenic Coding sequence variant, inframe deletion
rs122453113 C>T Pathogenic Coding sequence variant, stop gained
rs122453114 G>C Pathogenic Coding sequence variant, missense variant
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT049670 hsa-miR-92a-3p CLASH 23622248
MIRT048259 hsa-miR-196a-5p CLASH 23622248
MIRT044490 hsa-miR-320a CLASH 23622248
MIRT041648 hsa-miR-484 CLASH 23622248
MIRT036805 hsa-miR-877-3p CLASH 23622248
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0003674 Function Molecular_function ND
GO:0005308 Function Creatine transmembrane transporter activity NAS 8661037
GO:0005309 Function Creatine:sodium symporter activity IEA
GO:0005886 Component Plasma membrane TAS
GO:0005887 Component Integral component of plasma membrane IBA 21873635
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID P48029
Protein name Sodium- and chloride-dependent creatine transporter 1 (CT1) (Creatine transporter 1) (Solute carrier family 6 member 8)
Protein function Creatine:sodium symporter which mediates the uptake of creatine (PubMed:17465020, PubMed:22644605, PubMed:25861866, PubMed:7945388, PubMed:7953292, PubMed:9882430). Plays an important role in supplying creatine to the brain via the blood-brain b
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00209 SNF
52 583
Sodium:neurotransmitter symporter family
Family
Sequence
Sequence length 635
Interactions View interactions
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
 
Reactome
    Creatine metabolism
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Attention deficit hyperactivity disorder Attention deficit hyperactivity disorder rs120074176, rs786205019
Autism Autistic Disorder, Autistic behavior rs121964908, rs121912597, rs2710102, rs7794745, rs142990298, rs62643608, rs181327458, rs797046134, rs869312704, rs1555013332, rs876657679, rs1057518999, rs1057518658, rs771827120, rs1555187899, rs773080572, rs753871454, rs1684130791, rs1684180699, rs1553510219, rs1684182454, rs1559060428, rs1553510677, rs1576352885, rs1574152522, rs1574152672, rs1696658542, rs1751123722, rs1750373491, rs1751075634 18461508
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291, rs886041382, rs1057518991, rs1057518699, rs753254213, rs748294403, rs762552974, rs1135401795, rs1553121073, rs1553122926, rs1364690005, rs1554086554, rs1554210415, rs1554168326, rs1554776342, rs1553873247, rs1567860112, rs779009256, rs1557447255, rs1564568350, rs780011005, rs1597464953, rs1200336864, rs1569513017, rs1587459606, rs1570332505, rs748888652, rs1575155995, rs2087029320, rs1589669105, rs1601769604, rs1184981709, rs749201074
Hirschsprung disease Hirschsprung Disease rs104893891, rs76262710, rs75075748, rs75996173, rs79014735, rs77316810, rs75076352, rs76087194, rs76534745, rs76764689, rs76449634, rs78098482, rs79661516, rs104894389, rs769735757, rs267606780, rs1568823467, rs377767412, rs193922699, rs75030001, rs606231342, rs1553540620, rs759944122, rs1057519322, rs1057519323, rs1057519052, rs1588873476, rs1588866040, rs1838178869
Unknown
Disease name Disease term dbSNP ID References
Creatine deficiency Creatine deficiency, X-linked rs384573, rs782028471, rs150207268, rs376038235, rs781925657, rs782388832, rs782114947, rs140601882, rs1131691726, rs1238996324, rs374163604, rs782676733, rs1236176576, rs1557043775, rs1198790754, rs1181103233, rs1261794545, rs1233444890, rs782598816, rs782000377, rs782808736, rs782416756, rs201838389, rs782748657, rs1557044433, rs199937648, rs202136567, rs782764159, rs781814962, rs782128137, rs782551106, rs782488606, rs782481058, rs1557045747, rs1160275875 23644449, 21140503, 21836662, 15154114, 17465020, 24123876, 11326334, 12210795, 23660394, 21910234, 23033978, 25803912, 17101918, 16601898, 22644605, 20602486, 11898126, 19706062, 16738945, 17603797, 25861866
Creatine transporter deficiency, x-linked X-linked creatine transporter deficiency
Development disorder Developmental Disabilities, Child Development Deviations, Child Development Disorders, Specific 11326334
Dwarfism Dwarfism

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