PINK1 (PTEN induced kinase 1)
|
Gene
|
Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
|
65018 |
Gene nameGene Name - the full gene name approved by the HGNC.
|
PTEN induced kinase 1 |
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
|
PINK1 |
SynonymsGene synonyms aliases
|
BRPK, PARK6 |
ChromosomeChromosome number
|
1 |
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
|
1p36.12 |
SummarySummary of gene provided in NCBI Entrez Gene.
|
This gene encodes a serine/threonine protein kinase that localizes to mitochondria. It is thought to protect cells from stress-induced mitochondrial dysfunction. Mutations in this gene cause one form of autosomal recessive early-onset Parkinson disease. [ |
SNPsSNP information provided by dbSNP.
|
SNP ID |
Visualize variation |
Clinical significance |
Consequence |
rs45604240 |
C>T |
Uncertain-significance, conflicting-interpretations-of-pathogenicity |
Coding sequence variant, missense variant |
rs74315357 |
C>A,T |
Pathogenic |
Stop gained, coding sequence variant, synonymous variant |
rs74315360 |
C>A |
Pathogenic |
Missense variant, coding sequence variant |
rs756677845 |
G>- |
Pathogenic |
Frameshift variant, coding sequence variant |
rs756783990 |
C>A |
Pathogenic |
Coding sequence variant, stop gained |
rs768091663 |
G>C |
Not-provided, pathogenic |
Missense variant, coding sequence variant |
rs1557561340 |
C>- |
Pathogenic |
Coding sequence variant, frameshift variant |
|
miRNAmiRNA information provided by mirtarbase database.
|
|
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
|
GO ID |
Ontology |
Definition |
Evidence |
Reference |
GO:0000287 |
Function |
Magnesium ion binding |
IDA |
14607334 |
GO:0000422 |
Process |
Autophagy of mitochondrion |
IBA |
21873635 |
GO:0000422 |
Process |
Autophagy of mitochondrion |
IMP |
20798600, 23933751, 24896179 |
GO:0000785 |
Component |
Chromatin |
IDA |
24798695 |
GO:0001934 |
Process |
Positive regulation of protein phosphorylation |
IDA |
25244949 |
GO:0002020 |
Function |
Protease binding |
IPI |
21138942 |
GO:0002020 |
Function |
Protease binding |
TAS |
24522549 |
GO:0002082 |
Process |
Regulation of oxidative phosphorylation |
IDA |
20871098 |
GO:0002931 |
Process |
Response to ischemia |
IEA |
|
GO:0004672 |
Function |
Protein kinase activity |
IBA |
21873635 |
GO:0004672 |
Function |
Protein kinase activity |
IMP |
25527497, 32047033 |
GO:0004674 |
Function |
Protein serine/threonine kinase activity |
IBA |
21873635 |
GO:0004674 |
Function |
Protein serine/threonine kinase activity |
IDA |
14607334, 17579517, 19880420, 24784582, 25527291 |
GO:0004674 |
Function |
Protein serine/threonine kinase activity |
ISS |
|
GO:0004674 |
Function |
Protein serine/threonine kinase activity |
TAS |
24522549 |
GO:0005515 |
Function |
Protein binding |
IPI |
16632486, 17579517, 19229105, 20153330, 21177249, 22078885, 23933751, 24357652, 24475098, 25814554, 31536960, 32814053 |
GO:0005524 |
Function |
ATP binding |
IDA |
14607334 |
GO:0005634 |
Component |
Nucleus |
IDA |
24798695 |
GO:0005737 |
Component |
Cytoplasm |
IDA |
16702191 |
GO:0005739 |
Component |
Mitochondrion |
IBA |
21873635 |
GO:0005739 |
Component |
Mitochondrion |
IDA |
15087508, 15824318, 16702191, 18957282, 19229105, 20798600, 21138942, 22354088, 23933751, 31536960 |
GO:0005739 |
Component |
Mitochondrion |
IGI |
21355049 |
GO:0005739 |
Component |
Mitochondrion |
IMP |
24184327 |
GO:0005741 |
Component |
Mitochondrial outer membrane |
IDA |
21426348 |
GO:0005741 |
Component |
Mitochondrial outer membrane |
IMP |
25527497 |
GO:0005741 |
Component |
Mitochondrial outer membrane |
TAS |
|
GO:0005743 |
Component |
Mitochondrial inner membrane |
IDA |
17579517, 21426348 |
GO:0005758 |
Component |
Mitochondrial intermembrane space |
IDA |
17579517, 21426348 |
GO:0005758 |
Component |
Mitochondrial intermembrane space |
TAS |
|
GO:0005783 |
Component |
Endoplasmic reticulum |
IDA |
31536960 |
GO:0005829 |
Component |
Cytosol |
IDA |
18957282, 19229105, 19880420, 20798600, 21138942, 21426348, 24798695 |
GO:0005829 |
Component |
Cytosol |
TAS |
|
GO:0005856 |
Component |
Cytoskeleton |
IDA |
24798695 |
GO:0006468 |
Process |
Protein phosphorylation |
IBA |
21873635 |
GO:0006468 |
Process |
Protein phosphorylation |
IDA |
14607334, 21177249, 25527291 |
GO:0006468 |
Process |
Protein phosphorylation |
IMP |
18957282, 25527497 |
GO:0006468 |
Process |
Protein phosphorylation |
TAS |
24522549 |
GO:0006511 |
Process |
Ubiquitin-dependent protein catabolic process |
TAS |
24522549 |
GO:0006979 |
Process |
Response to oxidative stress |
IGI |
24475098 |
GO:0007005 |
Process |
Mitochondrion organization |
IMP |
18560593 |
GO:0010310 |
Process |
Regulation of hydrogen peroxide metabolic process |
IEA |
|
GO:0010629 |
Process |
Negative regulation of gene expression |
ISS |
24475098 |
GO:0010821 |
Process |
Regulation of mitochondrion organization |
IMP |
21508222 |
GO:0010857 |
Function |
Calcium-dependent protein kinase activity |
IDA |
19880420 |
GO:0010952 |
Process |
Positive regulation of peptidase activity |
TAS |
24522549 |
GO:0016020 |
Component |
Membrane |
IDA |
24798695 |
GO:0016236 |
Process |
Macroautophagy |
TAS |
|
GO:0016239 |
Process |
Positive regulation of macroautophagy |
IMP |
20871098 |
GO:0016242 |
Process |
Negative regulation of macroautophagy |
IMP |
19279012 |
GO:0016301 |
Function |
Kinase activity |
IDA |
15824318 |
GO:0016301 |
Function |
Kinase activity |
NAS |
21563316 |
GO:0016504 |
Function |
Peptidase activator activity |
TAS |
24522549 |
GO:0016567 |
Process |
Protein ubiquitination |
IMP |
23933751 |
GO:0018105 |
Process |
Peptidyl-serine phosphorylation |
IDA |
17579517, 19880420 |
GO:0018105 |
Process |
Peptidyl-serine phosphorylation |
ISS |
|
GO:0018105 |
Process |
Peptidyl-serine phosphorylation |
TAS |
23626584 |
GO:0022904 |
Process |
Respiratory electron transport chain |
IEA |
|
GO:0030424 |
Component |
Axon |
IDA |
16702191 |
GO:0030426 |
Component |
Growth cone |
IEA |
|
GO:0031307 |
Component |
Integral component of mitochondrial outer membrane |
IDA |
18687899 |
GO:0031396 |
Process |
Regulation of protein ubiquitination |
IDA |
19880420 |
GO:0031396 |
Process |
Regulation of protein ubiquitination |
IMP |
20871098, 23212910 |
GO:0031398 |
Process |
Positive regulation of protein ubiquitination |
ISS |
|
GO:0031625 |
Function |
Ubiquitin protein ligase binding |
IPI |
20798600 |
GO:0032148 |
Process |
Activation of protein kinase B activity |
IC |
21177249 |
GO:0032226 |
Process |
Positive regulation of synaptic transmission, dopaminergic |
IEA |
|
GO:0033138 |
Process |
Positive regulation of peptidyl-serine phosphorylation |
IDA |
21177249 |
GO:0033138 |
Process |
Positive regulation of peptidyl-serine phosphorylation |
IMP |
24660806 |
GO:0033138 |
Process |
Positive regulation of peptidyl-serine phosphorylation |
TAS |
18221368 |
GO:0033603 |
Process |
Positive regulation of dopamine secretion |
IEA |
|
GO:0034599 |
Process |
Cellular response to oxidative stress |
IMP |
22764206 |
GO:0035307 |
Process |
Positive regulation of protein dephosphorylation |
IEA |
|
GO:0035556 |
Process |
Intracellular signal transduction |
IDA |
14607334 |
GO:0036289 |
Process |
Peptidyl-serine autophosphorylation |
IMP |
25527497 |
GO:0036289 |
Process |
Peptidyl-serine autophosphorylation |
TAS |
23626584 |
GO:0038203 |
Process |
TORC2 signaling |
IC |
21177249 |
GO:0042981 |
Process |
Regulation of apoptotic process |
IBA |
21873635 |
GO:0043123 |
Process |
Positive regulation of I-kappaB kinase/NF-kappaB signaling |
IDA |
19880420 |
GO:0043254 |
Process |
Regulation of protein-containing complex assembly |
IDA |
19880420 |
GO:0043422 |
Function |
Protein kinase B binding |
IDA |
21177249 |
GO:0043524 |
Process |
Negative regulation of neuron apoptotic process |
IMP |
18560593 |
GO:0044297 |
Component |
Cell body |
IDA |
16702191 |
GO:0044877 |
Function |
Protein-containing complex binding |
IMP |
24270810 |
GO:0045727 |
Process |
Positive regulation of translation |
IEA |
|
GO:0046329 |
Process |
Negative regulation of JNK cascade |
TAS |
18221368 |
GO:0048471 |
Component |
Perinuclear region of cytoplasm |
IDA |
16702191 |
GO:0050821 |
Process |
Protein stabilization |
IMP |
19229105 |
GO:0051091 |
Process |
Positive regulation of DNA-binding transcription factor activity |
IEA |
|
GO:0051443 |
Process |
Positive regulation of ubiquitin-protein transferase activity |
TAS |
24522549 |
GO:0051881 |
Process |
Regulation of mitochondrial membrane potential |
IGI |
24475098 |
GO:0051881 |
Process |
Regulation of mitochondrial membrane potential |
IMP |
18560593, 21138942 |
GO:0051897 |
Process |
Positive regulation of protein kinase B signaling |
IC |
21177249 |
GO:0055131 |
Function |
C3HC4-type RING finger domain binding |
IPI |
19880420 |
GO:0061136 |
Process |
Regulation of proteasomal protein catabolic process |
NAS |
22078885 |
GO:0071456 |
Process |
Cellular response to hypoxia |
IMP |
24553947 |
GO:0072655 |
Process |
Establishment of protein localization to mitochondrion |
IMP |
18957282, 25527497 |
GO:0072656 |
Process |
Maintenance of protein location in mitochondrion |
IMP |
25527497 |
GO:0090141 |
Process |
Positive regulation of mitochondrial fission |
IBA |
21873635 |
GO:0090200 |
Process |
Positive regulation of release of cytochrome c from mitochondria |
IMP |
19880420 |
GO:0090258 |
Process |
Negative regulation of mitochondrial fission |
IMP |
19279012 |
GO:0097237 |
Process |
Cellular response to toxic substance |
TAS |
18221368 |
GO:0097413 |
Component |
Lewy body |
TAS |
24522549 |
GO:0097449 |
Component |
Astrocyte projection |
IDA |
16702191 |
GO:0098779 |
Process |
Positive regulation of mitophagy in response to mitochondrial depolarization |
IMP |
20871098 |
GO:0099074 |
Process |
Mitochondrion to lysosome transport |
IMP |
24446486 |
GO:0106310 |
Function |
Protein serine kinase activity |
IEA |
|
GO:0106311 |
Function |
Protein threonine kinase activity |
IEA |
|
GO:1900407 |
Process |
Regulation of cellular response to oxidative stress |
IMP |
24446486 |
GO:1901727 |
Process |
Positive regulation of histone deacetylase activity |
IEA |
|
GO:1902803 |
Process |
Regulation of synaptic vesicle transport |
TAS |
21563316 |
GO:1902902 |
Process |
Negative regulation of autophagosome assembly |
IMP |
19279012 |
GO:1902958 |
Process |
Positive regulation of mitochondrial electron transport, NADH to ubiquinone |
TAS |
21138942 |
GO:1903146 |
Process |
Regulation of autophagy of mitochondrion |
TAS |
21563316 |
GO:1903147 |
Process |
Negative regulation of autophagy of mitochondrion |
IMP |
19279012 |
GO:1903202 |
Process |
Negative regulation of oxidative stress-induced cell death |
IDA |
16632486 |
GO:1903204 |
Process |
Negative regulation of oxidative stress-induced neuron death |
TAS |
24522549 |
GO:1903214 |
Process |
Regulation of protein targeting to mitochondrion |
IDA |
25244949 |
GO:1903214 |
Process |
Regulation of protein targeting to mitochondrion |
IGI |
21508222 |
GO:1903214 |
Process |
Regulation of protein targeting to mitochondrion |
IMP |
23212910 |
GO:1903298 |
Process |
Negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway |
IEA |
|
GO:1903384 |
Process |
Negative regulation of hydrogen peroxide-induced neuron intrinsic apoptotic signaling pathway |
IDA |
21177249 |
GO:1903384 |
Process |
Negative regulation of hydrogen peroxide-induced neuron intrinsic apoptotic signaling pathway |
IMP |
23261939 |
GO:1903751 |
Process |
Negative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide |
IDA |
17579517 |
GO:1903852 |
Process |
Positive regulation of cristae formation |
IMP |
19279012 |
GO:1903955 |
Process |
Positive regulation of protein targeting to mitochondrion |
HMP |
24270810 |
GO:1904544 |
Process |
Positive regulation of free ubiquitin chain polymerization |
ISS |
|
GO:1904783 |
Process |
Positive regulation of NMDA glutamate receptor activity |
IEA |
|
GO:1904841 |
Function |
TORC2 complex binding |
IPI |
21177249 |
GO:1904881 |
Process |
Cellular response to hydrogen sulfide |
IEA |
|
GO:2000377 |
Process |
Regulation of reactive oxygen species metabolic process |
IGI |
24475098 |
GO:2000377 |
Process |
Regulation of reactive oxygen species metabolic process |
IMP |
21138942 |
GO:2000378 |
Process |
Negative regulation of reactive oxygen species metabolic process |
IMP |
18560593 |
GO:2001171 |
Process |
Positive regulation of ATP biosynthetic process |
TAS |
20871098 |
GO:2001243 |
Process |
Negative regulation of intrinsic apoptotic signaling pathway |
IDA |
15087508 |
|
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
|
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Protein
|
UniProt ID |
Q9BXM7 |
Protein name |
Serine/threonine-protein kinase PINK1, mitochondrial (EC 2.7.11.1) (BRPK) (PTEN-induced putative kinase protein 1) |
Protein function |
Serine/threonine-protein kinase which acts as a sensor of mitochondrial damage and protects against mitochondrial dysfunction during cellular stress. It phosphorylates mitochondrial proteins to coordinate mitochondrial quality control mechanisms |
PDB |
9EIH
,
9EII
,
9EIJ
|
Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF00069 |
Pkinase |
264 → 509 |
Protein kinase domain |
Domain |
|
Sequence |
|
Sequence length |
581 |
Interactions |
View interactions |
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
|
|
Associated diseases
|
Causal |
Disease name |
Disease term |
dbSNP ID |
References |
Dysautonomia |
Dysautonomia |
rs111033171, rs137853022, rs28939712, rs754348901, rs749052963, rs1057517169, rs1057516865, rs763445509, rs767527819, rs781333644, rs1239081703, rs1554696574, rs539544212, rs1201626345, rs774890086, rs1554703061, rs1554703613, rs1319053366, rs1554703851, rs868073099, rs926177767, rs376078668, rs1554695299, rs1554696648, rs1554696934, rs1554699327, rs1554691572, rs1554695846, rs1554697001, rs770668926, rs1554698037, rs759412460, rs1554702142, rs765572951, rs1554702880, rs1554703831, rs760774999, rs1554696650, rs757972943, rs1554703874, rs1554703907, rs571348995 |
|
Glioblastoma |
Glioblastoma Multiforme |
rs121913500, rs886042842, rs1555138291, rs1558518449, rs1567176006, rs1558650888 |
|
Neuroblastoma |
Neuroblastoma |
rs121908161, rs113994087, rs113994089, rs281864719, rs863225285, rs863225284, rs863225283, rs281864720, rs863225282, rs863225281, rs1057519698, rs915983602, rs1469271544 |
23334666 |
Parkinson disease |
Parkinsonian Disorders, Autosomal Dominant Juvenile Parkinson Disease, PARKINSON DISEASE 2, AUTOSOMAL RECESSIVE JUVENILE, Parkinson Disease, Parkinson Disease 6, Autosomal Recessive Early-Onset, Young-onset Parkinson disease |
rs116074753, rs118203903, rs118203904, rs115735611, rs33939927, rs35801418, rs34805604, rs35870237, rs34995376, rs74315355, rs28940284, rs74315356, rs74315357, rs28940285, rs730880302, rs750664040, rs74315359, rs74315360, rs45539432, rs74315361, rs119451946, rs80356771, rs74500255, rs75822236, rs1141814, rs78973108, rs121908681, rs121908686, rs121908687, rs137853054, rs137853055, rs137853056, rs137853057, rs137853058, rs137853059, rs34424986, rs137853060, rs397518439, rs28938172, rs74315351, rs74315353, rs137853051, rs118192098, rs121917767, rs121918104, rs1589451049, rs104893877, rs104893878, rs283413, rs112176450, rs111290936, rs188286943, rs387906863, rs387906864, rs774631197, rs199935023, rs387906942, rs397514694, rs398122403, rs398122404, rs398122405, rs104886460, rs409652, rs431905511, rs63751392, rs756677845, rs864309527, rs864309650, rs750014782, rs1554391082, rs864622011, rs869312810, rs869312809, rs869312811, rs369100678, rs879253853, rs869320761, rs747506979, rs879255630, rs886039854, rs191486604, rs781442277, rs1060499619, rs751037529, rs55777503, rs768091663, rs34208370, rs1553122929, rs772786691, rs754809877, rs1555907463, rs1557561340, rs781600849, rs141263564, rs1557901552, rs777160388, rs756783990, rs867929413, rs1237637353, rs1005937012, rs755000580, rs747427602, rs1578089802, rs771586218, rs748142049, rs1582953433, rs746646126, rs771529549, rs121918106 |
11254447, 26558463, 15349871, 24441527, 24792327, 23046578, 15349871, 24792327, 26558463, 11254447, 23046578, 24441527, 11254447, 26558463, 15349871, 24441527, 23046578, 24792327, 21366594, 22043175, 17010972, 24374061, 25149416, 15349870, 16401616, 18524835, 17579517, 16632486, 17960343, 16009891, 22043288, 22956510, 23303188, 16207217, 27003823, 17030667, 18785233, 15824318, 24652937, 21996382, 15349860, 20558144, 20798600, 15087508, 21421046, 16482571, 15970950, 19229105, 15505171, 16966503, 15596610, 16207731, 17055324, 24475098, 16257123, 15955953, 18286320, 24784582, 18359116 |
Schizophrenia |
Schizophrenia |
rs74315508, rs74315509, rs13447324, rs1558507406, rs387906932, rs387906933, rs863223354, rs863223355, rs776061422, rs863223349, rs748809996, rs759748655, rs863223353, rs863223350, rs863223356, rs781821239, rs863223348, rs863223346, rs863223347, rs863223351, rs863223352, rs61734270, rs797045205, rs869312829, rs869312830, rs770913157, rs869312832, rs869312831, rs781720548, rs1262969313 |
25354644, 18261714, 18546294 |
|
Unknown |
Disease name |
Disease term |
dbSNP ID |
References |
Abnormal male sexual function |
Abnormal male sexual function |
|
|
Anxiety disorder |
Anxiety |
|
|
Dementia |
Dementia |
|
|
Dementia of frontal lobe |
Dementia of frontal lobe type |
|
|
Dyskinetic syndrome |
Dyskinetic syndrome |
|
|
Female sexual dysfunction |
Female sexual dysfunction |
|
|
Gastroparesis |
Gastroparesis |
|
|
Hallucinations |
Hallucinations |
|
|
Male sexual dysfunction |
Male sexual dysfunction |
|
|
Mental depression |
Depressive disorder, Unipolar Depression, Major Depressive Disorder |
rs587778876, rs587778877 |
18261714 |
Panic disorder |
Panic Attacks |
|
|
Parkinsonian disease |
Autosomal Dominant Parkinsonism, Autosomal Recessive Parkinsonism, Familial Juvenile Parkinsonism, Parkinsonism, Juvenile |
|
11254447, 24792327, 15349871, 24441527, 23046578, 26558463, 15349871, 26558463, 11254447, 24792327, 23046578, 24441527, 24441527, 24792327, 23046578, 11254447, 26558463, 15349871, 24792327, 15349871, 24441527, 11254447, 26558463, 23046578 |
Ramsay hunt paralysis syndrome |
Ramsay Hunt Paralysis Syndrome |
|
24441527, 11254447, 23046578, 24792327, 15349871, 26558463 |
Restless legs syndrome |
Restless Legs Syndrome |
|
|
Social communication disorder |
Social Communication Disorder |
|
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|
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