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ARV1 (ARV1 fatty acid homeostasis modulator)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
64801
Gene nameGene Name - the full gene name approved by the HGNC.
ARV1 fatty acid homeostasis modulator
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
ARV1
SynonymsGene synonyms aliases
DEE38, EIEE38
ChromosomeChromosome number
1
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
1q42.2
SummarySummary of gene provided in NCBI Entrez Gene.
this gene encodes a transmembrane protein that contains a conserved zinc ribbon motif at the N- terminus. A similar protein in mouse is thought to function in fatty acid homeostasis. Mutations in this gene are associated with early infantile epileptic enc
SNPsSNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs150619347 G>A Pathogenic Splice donor variant
rs730882241 G>A Likely-pathogenic, pathogenic Coding sequence variant, missense variant, non coding transcript variant
rs1572343011 ->C Likely-pathogenic Coding sequence variant, non coding transcript variant, frameshift variant
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT801474 hsa-miR-3151 CLIP-seq
MIRT801475 hsa-miR-3185 CLIP-seq
MIRT801476 hsa-miR-3606 CLIP-seq
MIRT801477 hsa-miR-4265 CLIP-seq
MIRT801478 hsa-miR-4296 CLIP-seq
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 28514442, 32296183
GO:0005789 Component Endoplasmic reticulum membrane IDA 20663892
GO:0005789 Component Endoplasmic reticulum membrane TAS
GO:0005794 Component Golgi apparatus IBA 21873635
GO:0006665 Process Sphingolipid metabolic process IBA 21873635
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q9H2C2
Protein name Protein ARV1 (hARV1)
Protein function Plays a role as a mediator in the endoplasmic reticulum (ER) cholesterol and bile acid homeostasis (PubMed:11063737, PubMed:12145310, PubMed:20663892). Participates in sterol transport out of the ER and distribution into plasma membranes (PubMed
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF04161 Arv1
33 223
Arv1-like family
Family
Sequence
Sequence length 271
Interactions View interactions
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
 
Reactome
    Cholesterol biosynthesis
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Attention deficit hyperactivity disorder Attention deficit hyperactivity disorder rs120074176, rs786205019
Autism Autistic Disorder rs121964908, rs121912597, rs2710102, rs7794745, rs142990298, rs62643608, rs181327458, rs797046134, rs869312704, rs1555013332, rs876657679, rs1057518999, rs1057518658, rs771827120, rs1555187899, rs773080572, rs753871454, rs1684130791, rs1684180699, rs1553510219, rs1684182454, rs1559060428, rs1553510677, rs1576352885, rs1574152522, rs1574152672, rs1696658542, rs1751123722, rs1750373491, rs1751075634
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291, rs886041382, rs1057518991, rs1057518699, rs753254213, rs748294403, rs762552974, rs1135401795, rs1553121073, rs1553122926, rs1364690005, rs1554086554, rs1554210415, rs1554168326, rs1554776342, rs1553873247, rs1567860112, rs779009256, rs1557447255, rs1564568350, rs780011005, rs1597464953, rs1200336864, rs1569513017, rs1587459606, rs1570332505, rs748888652, rs1575155995, rs2087029320, rs1589669105, rs1601769604, rs1184981709, rs749201074
Developmental regression Developmental regression rs1224421127
Unknown
Disease name Disease term dbSNP ID References
Cerebral atrophy Cerebral atrophy
Dwarfism Dwarfism
Dyskinetic syndrome Dyskinetic syndrome
Gastroesophageal reflux disease Gastroesophageal reflux disease

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