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CSMD1 (CUB and Sushi multiple domains 1)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
64478
Gene nameGene Name - the full gene name approved by the HGNC.
CUB and Sushi multiple domains 1
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
CSMD1
SynonymsGene synonyms aliases
PPP1R24
ChromosomeChromosome number
8
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
8p23.2
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT503857 hsa-miR-1277-5p HITS-CLIP 21572407
MIRT541802 hsa-miR-338-5p HITS-CLIP 21572407
MIRT503854 hsa-miR-4704-5p HITS-CLIP 21572407
MIRT503853 hsa-miR-5011-5p HITS-CLIP 21572407
MIRT503852 hsa-miR-567 HITS-CLIP 21572407
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0016021 Component Integral component of membrane IEA
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q96PZ7
Protein name CUB and sushi domain-containing protein 1 (CUB and sushi multiple domains protein 1)
Protein function Potential suppressor of squamous cell carcinomas.
PDB 2EHF
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00431 CUB
32 137
CUB domain
Domain
PF00084 Sushi
145 202
Sushi repeat (SCR repeat)
Domain
PF00431 CUB
208 309
CUB domain
Domain
PF00084 Sushi
349 406
Sushi repeat (SCR repeat)
Domain
PF00431 CUB
411 519
CUB domain
Domain
PF00084 Sushi
527 580
Sushi repeat (SCR repeat)
Domain
PF00431 CUB
584 689
CUB domain
Domain
PF00084 Sushi
697 754
Sushi repeat (SCR repeat)
Domain
PF00431 CUB
758 863
CUB domain
Domain
PF00084 Sushi
873 926
Sushi repeat (SCR repeat)
Domain
PF00431 CUB
930 1037
CUB domain
Domain
PF00084 Sushi
1045 1100
Sushi repeat (SCR repeat)
Domain
PF00431 CUB
1104 1209
CUB domain
Domain
PF00084 Sushi
1217 1273
Sushi repeat (SCR repeat)
Domain
PF00431 CUB
1277 1383
CUB domain
Domain
PF00084 Sushi
1391 1447
Sushi repeat (SCR repeat)
Domain
PF00431 CUB
1451 1556
CUB domain
Domain
PF00084 Sushi
1564 1621
Sushi repeat (SCR repeat)
Domain
PF00431 CUB
1625 1730
CUB domain
Domain
PF00084 Sushi
1741 1798
Sushi repeat (SCR repeat)
Domain
PF00431 CUB
1802 1907
CUB domain
Domain
PF00084 Sushi
1915 1970
Sushi repeat (SCR repeat)
Domain
PF00431 CUB
1974 2079
CUB domain
Domain
PF00084 Sushi
2087 2142
Sushi repeat (SCR repeat)
Domain
PF00431 CUB
2146 2249
CUB domain
Domain
PF00084 Sushi
2258 2315
Sushi repeat (SCR repeat)
Domain
PF00431 CUB
2319 2427
CUB domain
Domain
PF00084 Sushi
2432 2490
Sushi repeat (SCR repeat)
Domain
PF00084 Sushi
2495 2552
Sushi repeat (SCR repeat)
Domain
PF00084 Sushi
2571 2617
Sushi repeat (SCR repeat)
Domain
PF00084 Sushi
2622 2675
Sushi repeat (SCR repeat)
Domain
PF00084 Sushi
2680 2733
Sushi repeat (SCR repeat)
Domain
PF00084 Sushi
2738 2791
Sushi repeat (SCR repeat)
Domain
PF00084 Sushi
2796 2854
Sushi repeat (SCR repeat)
Domain
PF00084 Sushi
2859 2912
Sushi repeat (SCR repeat)
Domain
PF00084 Sushi
2920 2973
Sushi repeat (SCR repeat)
Domain
PF00084 Sushi
2978 3032
Sushi repeat (SCR repeat)
Domain
PF00084 Sushi
3037 3092
Sushi repeat (SCR repeat)
Domain
PF00084 Sushi
3097 3150
Sushi repeat (SCR repeat)
Domain
PF00084 Sushi
3155 3208
Sushi repeat (SCR repeat)
Domain
PF00084 Sushi
3216 3270
Sushi repeat (SCR repeat)
Domain
PF00084 Sushi
3275 3330
Sushi repeat (SCR repeat)
Domain
Sequence
MTAWRRFQSLLLLLGLLVLCARLLTAAKGQNCGGLVQGPNGTIESPGFPHGYPNYANCTW
IIITGERNRIQLSFHTFALEEDFDILSVYDGQPQQGNLKVRLSGFQLPSSIVSTGSILTL
WFTTDFAVSAQGFKALY
EVLPSHTCGNPGEILKGVLHGTRFNIGDKIRYSCLPGYILEGH
AILTCIVSPGNGASWDFPAPFC
RAEGACGGTLRGTSSSISSPHFPSEYENNADCTWTILA
EPGDTIALVFTDFQLEEGYDFLEISGTEAPSIWLTGMNLPSPVISSKNWLRLHFTSDSNH
RRKGFNAQF
QVKKAIELKSRGVKMLPSKDGSHKNSVLSQGGVALVSDMCPDPGIPENGRR
AGSDFRVGANVQFSCEDNYVLQGSKSITCQRVTETLAAWSDHRPIC
RARTCGSNLRGPSG
VITSPNYPVQYEDNAHCVWVITTTDPDKVIKLAFEEFELERGYDTLTVGDAGKVGDTRSV
LYVLTGSSVPDLIVSMSNQMWLHLQSDDSIGSPGFKAVY
QEIEKGGCGDPGIPAYGKRTG
SSFLHGDTLTFECPAAFELVGERVITCQQNNQWSGNKPSC
VFSCFFNFTASSGIILSPNY
PEEYGNNMNCVWLIISEPGSRIHLIFNDFDVEPQFDFLAVKDDGISDITVLGTFSGNEVP
SQLASSGHIVRLEFQSDHSTTGRGFNITY
TTFGQNECHDPGIPINGRRFGDRFLLGSSVS
FHCDDGFVKTQGSESITCILQDGNVVWSSTVPRC
EAPCGGHLTASSGVILPPGWPGYYKD
SLHCEWIIEAKPGHSIKITFDRFQTEVNYDTLEVRDGPASSSPLIGEYHGTQAPQFLIST
GNFMYLLFTTDNSRSSIGFLIHY
ESVTLESDSCLDPGIPVNGHRHGGDFGIRSTVTFSCD
PGYTLSDDEPLVCERNHQWNHALPSC
DALCGGYIQGKSGTVLSPGFPDFYPNSLNCTWTI
EVSHGKGVQMIFHTFHLESSHDYLLITEDGSFSEPVARLTGSVLPHTIKAGLFGNFTAQL
RFISDFSISYEGFNITF
SEYDLEPCDDPGVPAFSRRIGFHFGVGDSLTFSCFLGYRLEGA
TKLTCLGGGRRVWSAPLPRC
VAECGASVKGNEGTLLSPNFPSNYDNNHECIYKIETEAGK
GIHLRTRSFQLFEGDTLKVYDGKDSSSRPLGTFTKNELLGLILNSTSNHLWLEFNTNGSD
TDQGFQLTY
TSFDLVKCEDPGIPNYGYRIRDEGHFTDTVVLYSCNPGYAMHGSNTLTCLS
GDRRVWDKPLPSC
IAECGGQIHAATSGRILSPGYPAPYDNNLHCTWIIEADPGKTISLHF
IVFDTEMAHDILKVWDGPVDSDILLKEWSGSALPEDIHSTFNSLTLQFDSDFFISKSGFS
IQF
STSIAATCNDPGMPQNGTRYGDSREAGDTVTFQCDPGYQLQGQAKITCVQLNNRFFW
QPDPPTC
IAACGGNLTGPAGVILSPNYPQPYPPGKECDWRVKVNPDFVIALIFKSFNMEP
SYDFLHIYEGEDSNSPLIGSYQGSQAPERIESSGNSLFLAFRSDASVGLSGFAIEF
KEKP
REACFDPGNIMNGTRVGTDFKLGSTITYQCDSGYKILDPSSITCVIGADGKPSWDQVLPS
C
NAPCGGQYTGSEGVVLSPNYPHNYTAGQICLYSITVPKEFVVFGQFAYFQTALNDLAEL
FDGTHAQARLLSSLSGSHSGETLPLATSNQILLRFSAKSGASARGFHFVY
QAVPRTSDTQ
CSSVPEPRYGRRIGSEFSAGSIVRFECNPGYLLQGSTALHCQSVPNALAQWNDTIPSCVV
PCSGNFTQRRGTILSPGYPEPYGNNLNCIWKIIVTEGSGIQIQVISFATEQNWDSLEIHD
GGDVTAPRLGSFSGTTVPALLNSTSNQLYLHFQSDISVAAAGFHLEY
KTVGLAACQEPAL
PSNSIKIGDRYMVNDVLSFQCEPGYTLQGRSHISCMPGTVRRWNYPSPLC
IATCGGTLST
LGGVILSPGFPGSYPNNLDCTWRISLPIGYGAHIQFLNFSTEANHDFLEIQNGPYHTSPM
IGQFSGTDLPAALLSTTHETLIHFYSDHSQNRQGFKLAY
QAYELQNCPDPPPFQNGYMIN
SDYSVGQSVSFECYPGYILIGHPVLTCQHGINRNWNYPFPRC
DAPCGYNVTSQNGTIYSP
GFPDEYPILKDCIWLITVPPGHGVYINFTLLQTEAVNDYIAVWDGPDQNSPQLGVFSGNT
ALETAYSSTNQVLLKFHSDFSNGGFFVLN
FHAFQLKKCQPPPAVPQAEMLTEDDDFEIGD
FVKYQCHPGYTLVGTDILTCKLSSQLQFEGSLPTC
EAQCPANEVRTGSSGVILSPGYPGN
YFNSQTCSWSIKVEPNYNITIFVDTFQSEKQFDALEVFDGSSGQSPLLVVLSGNHTEQSN
FTSRSNQLYLRWSTDHATSKKGFKIRY
AAPYCSLTHPLKNGGILNRTAGAVGSKVHYFCK
PGYRMVGHSNATCRRNPLGMYQWDSLTPLC
QAVSCGIPESPGNGSFTGNEFTLDSKVVYE
CHEGFKLESSQQATAVCQEDGLWSNKGKPPTC
KPVACPSIEAQLSEHVIWRLVSGSLNEY
GAQVLLSCSPGYYLEGWRLLRCQANGTWNIGDERPSC
RVISCGSLSFPPNGNKIGTLTVY
GATAIFTCNTGYTLVGSHVRECLANGLWSGSETRC
LAGHCGSPDPIVNGHISGDGFSYRD
TVVYQCNPGFRLVGTSVRICLQDHKWSGQTPVC
VPITCGHPGNPAHGFTNGSEFNLNDVV
NFTCNTGYLLQGVSRAQCRSNGQWSSPLPTC
RVVNCSDPGFVENAIRHGQQNFPESFEYG
MSILYHCKKGFYLLGSSALTCMANGLWDRSLPKC
LAISCGHPGVPANAVLTGELFTYGAV
VHYSCRGSESLIGNDTRVCQEDSHWSGALPHC
TGNNPGFCGDPGTPAHGSRLGDDFKTKS
LLRFSCEMGHQLRGSPERTCLLNGSWSGLQPVC
EAVSCGNPGTPTNGMIVSSDGILFSSS
VIYACWEGYKTSGLMTRHCTANGTWTGTAPDC
TIISCGDPGTLANGIQFGTDFTFNKTVS
YQCNPGYVMEAVTSATIRCTKDGRWNPSKPVC
KAVLCPQPPPVQNGTVEGSDFRWGSSIS
YSCMDGYQLSHSAILSCEGRGVWKGEIPQC
LPVFCGDPGIPAEGRLSGKSFTYKSEVFFQ
CKSPFILVGSSRRVCQADGTWSGIQPTC
IDPAHNTCPDPGTPHFGIQNSSRGYEVGSTVF
FRCRKGYHIQGSTTRTCLANLTWSGIQTEC
IPHACRQPETPAHADVRAIDLPTFGYTLVY
TCHPGFFLAGGSEHRTCKADMKWTGKSPVC
KSKGVREVNETVTKTPVPSDVFFVNSLWKG
YYEYLGKRQPATLTVDWFNATSSKVNATFSEASPVELKLTGIYKKEEAHLLLKAFQIKGQ
ADIFVSKFENDNWGLDGYVSSGLERGGFTFQGDIHGKDFGKFKLERQDPLNPDQDSSSHY
HGTSSGSVAAAILVPFFALILSGFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYD
TNLKPTEAKAVRFDTTLNTVCTVV
Sequence length 3564
Interactions View interactions
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Alzheimer disease Alzheimer`s Disease rs63750215, rs28936379, rs63749851, rs63749884, rs28936380, rs63750048, rs63750579, rs63750264, rs63749964, rs63750671, rs281865161, rs63750066, rs63750399, rs63750734, rs63751039, rs63750973, rs63749810, rs63750643, rs193922916, rs63750306, rs63750590, rs63750526, rs63751235, rs661, rs63751037, rs63749885, rs63750231, rs63751229, rs63751272, rs63751223, rs63750391, rs63751163, rs281875357, rs63751141, rs63750082, rs121917807, rs63751399, rs63750265, rs63751144, rs63750886, rs63751068, rs121917808, rs63749891, rs63750083, rs63749824, rs63750577, rs267606983, rs63750218, rs63751287, rs63750900, rs145518263, rs63751475, rs63750450, rs63749805, rs63751278, rs63751106, rs63750004, rs63749806, rs63751024, rs63750248, rs63750779, rs63751139, rs63750219, rs63750298, rs63750687, rs63750851, rs1553268799, rs1561901881, rs1561905293, rs866101707, rs1566638673, rs63750009, rs1566656702, rs1566657804, rs1567885728, rs1568339995, rs1566630791, rs1555358260, rs63750964, rs1594998354, rs63751316 23535033, 30514930
Arthritis Juvenile arthritis rs1594890601, rs1594882933, rs184370809, rs776489319, rs1594883470 24709693
Attention deficit hyperactivity disorder Attention deficit hyperactivity disorder rs120074176, rs786205019 23453885
Chronic obstructive pulmonary disease Chronic Obstructive Airway Disease rs2227956, rs1008438, rs1043618, rs562047, rs1061581, rs2763979, rs6457452, rs13147758, rs1828591, rs13118928 25241909
Unknown
Disease name Disease term dbSNP ID References
Bipolar disorder Bipolar Disorder 23453885, 24387768, 24166486
Development disorder Child Development Disorders, Pervasive 23453885
Bronchitis Bronchitis, Chronic 25241909
Intervertebral disc degeneration Intervertebral Disc Degeneration 22993228

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