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ABCG5 (ATP binding cassette subfamily G member 5)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
64240
Gene nameGene Name - the full gene name approved by the HGNC.
ATP binding cassette subfamily G member 5
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
ABCG5
SynonymsGene synonyms aliases
STSL, STSL2
ChromosomeChromosome number
2
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
2p21
SummarySummary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, M
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT724539 hsa-miR-6771-3p HITS-CLIP 19536157
MIRT724538 hsa-miR-130b-5p HITS-CLIP 19536157
MIRT724537 hsa-miR-3191-5p HITS-CLIP 19536157
MIRT724536 hsa-miR-4753-3p HITS-CLIP 19536157
MIRT724535 hsa-miR-4768-5p HITS-CLIP 19536157
Transcription factors
Transcription factor Regulation Reference
HNF4A Repression 21123766
NR5A2 Activation 15121760
SREBF2 Repression 21123766
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 16870176, 17474147
GO:0005524 Function ATP binding IDA 16893193
GO:0005886 Component Plasma membrane TAS
GO:0005887 Component Integral component of plasma membrane ISS
GO:0007584 Process Response to nutrient IEA
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q9H222
Protein name ATP-binding cassette sub-family G member 5 (EC 7.6.2.-) (Sterolin-1)
Protein function ABCG5 and ABCG8 form an obligate heterodimer that mediates Mg(2+)- and ATP-dependent sterol transport across the cell membrane (PubMed:27144356). Plays an essential role in the selective transport of dietary plant sterols and cholesterol in and
PDB 5DO7 , 7JR7 , 7R87 , 7R88 , 7R89 , 7R8A , 7R8B , 8CUB
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00005 ABC_tran
69 221
ABC transporter
Domain
PF19055 ABC2_membrane_7
250 362
ABC-2 type transporter
Family
PF01061 ABC2_membrane
366 580
ABC-2 type transporter
Family
Sequence
Sequence length 651
Interactions View interactions
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
 
KEGG
 
Reactome
  ABC transporters
Fat digestion and absorption
Bile secretion
Cholesterol metabolism
  ABC transporters in lipid homeostasis
Defective ABCG8 causes gallbladder disease 4 and sitosterolemia
Defective ABCG5 causes sitosterolemia
NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Anemia stomatocytic anemia rs118204044, rs118204045, rs118204046, rs121918330, rs869320719, rs869312029, rs121918332, rs869320724, rs767094129, rs786205058, rs786205059, rs137853119, rs137853120, rs137853121, rs1384933966, rs137853122, rs137853123, rs786205060, rs267607121, rs121908584, rs80338697, rs80338699, rs120074166, rs120074167, rs1050828, rs74575103, rs137852314, rs5030868, rs137852316, rs137852317, rs137852318, rs137852319, rs137852320, rs137852321, rs137852322, rs137852323, rs137852324, rs72554665, rs387906468, rs5030872, rs137852326, rs137852333, rs137852327, rs137852328, rs137852329, rs137852330, rs137852331, rs137852332, rs137852334, rs137852335, rs137852336, rs137852339, rs76645461, rs137852340, rs137852341, rs78478128, rs137852343, rs137852344, rs137852345, rs587776730, rs137852346, rs137852347, rs137852349, rs2070404412, rs2070350038, rs2070350009, rs137852303, rs137852304, rs33946267, rs34378160, rs33933298, rs11549407, rs35724775, rs34598529, rs41469945, rs267607201, rs80338694, rs80338696, rs387907018, rs398123546, rs78365220, rs587777100, rs587777101, rs483352840, rs869312752, rs765487627, rs1557229599, rs1557230040, rs1555524842, rs782090947, rs1358275550, rs1557229736, rs1557230573, rs1556323334, rs1233124208, rs1293528130, rs146864395, rs1595503440, rs1603411214, rs137852325, rs1575247302, rs1603411177, rs1336651679, rs782322505
Arthritis Arthritis rs1594890601, rs1594882933, rs184370809, rs776489319, rs1594883470
Coronary artery disease Coronary Artery Disease rs137852988, rs121918313, rs121918529, rs121918531, rs137852340, rs405509, rs1555800701, rs1215189537 11099417, 11138003
Hemolytic anemia Chronic hemolytic anemia rs104894025, rs104894026, rs397518435, rs397518436, rs104894027, rs397518437, rs104894028, rs397518438, rs104894029, rs137853583, rs137853585, rs137853586, rs137853587, rs267606851, rs267606852, rs267606853, rs137853249, rs33924146, rs104894101, rs104894102, rs137853203, rs137853204, rs137853205, rs387906582, rs387906583, rs398122379, rs1064794848, rs774419705, rs1555367318, rs1345036090, rs1586033745, rs1571436535, rs2022057
Unknown
Disease name Disease term dbSNP ID References
Arteriosclerosis Premature arteriosclerosis
Atherosclerosis Atherosclerosis rs699947, rs59439148 11138003
Cerebral artery atherosclerosis Cerebral artery atherosclerosis
Coronary aneurysm Coronary Aneurysm

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