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SCT (secretin)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
6343
Gene nameGene Name - the full gene name approved by the HGNC.
Secretin
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
SCT
SynonymsGene synonyms aliases
-
ChromosomeChromosome number
11
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
11p15.5
SummarySummary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the glucagon family of peptides. The encoded preproprotein is secreted by endocrine S cells in the proximal small intestinal mucosa as a prohormone, then proteolytically processed to generate the mature peptide hormone. The r
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT1330948 hsa-miR-361-3p CLIP-seq
MIRT1330949 hsa-miR-4722-3p CLIP-seq
MIRT1330950 hsa-miR-4793-5p CLIP-seq
Transcription factors
Transcription factor Regulation Reference
SP1 Unknown 15118068
SP3 Unknown 15118068
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001664 Function G protein-coupled receptor binding IPI 7612008
GO:0002024 Process Diet induced thermogenesis ISS
GO:0005102 Function Signaling receptor binding IBA 21873635
GO:0005179 Function Hormone activity ISS
GO:0005179 Function Hormone activity NAS 11060443
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID P09683
Protein name Secretin
Protein function Hormone involved in different processes, such as regulation of the pH of the duodenal content, food intake and water homeostasis (PubMed:25332973). Exerts its biological effects by binding to secretin receptor (SCTR), a G-protein coupled recepto
PDB 6WI9 , 6WZG , 7D3S
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00123 Hormone_2
28 55
Peptide hormone
Family
Sequence
MAPRPLLLLLLLLGGSAARPAPPRARRHSDGTFTSELSRLREGARLQRLLQGLVGKRSEQ
DAENSMAWTRLSAGLLCPSGSNMPILQAWMPLDGTWSPWLPPGPMVSEPAGAAAEGTLRP
R
Sequence length 121
Interactions View interactions
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
 
KEGG
 
Reactome
  Neuroactive ligand-receptor interaction
Pancreatic secretion
Bile secretion
  G alpha (s) signalling events
Glucagon-type ligand receptors
ADORA2B mediated anti-inflammatory cytokines production
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Autism Autistic Disorder rs121964908, rs121912597, rs2710102, rs7794745, rs142990298, rs62643608, rs181327458, rs797046134, rs869312704, rs1555013332, rs876657679, rs1057518999, rs1057518658, rs771827120, rs1555187899, rs773080572, rs753871454, rs1684130791, rs1684180699, rs1553510219, rs1684182454, rs1559060428, rs1553510677, rs1576352885, rs1574152522, rs1574152672, rs1696658542, rs1751123722, rs1750373491, rs1751075634 12732234, 15272612, 16168596, 15206007
Unknown
Disease name Disease term dbSNP ID References
Choledochal cyst Choledochal Cyst, Choledochal Cyst, Type I, Choledochal Cyst, Type II, Choledochal Cyst, Type III, Choledochal Cyst, Type IV, Choledochal Cyst, Type V 18988797
Sclerocystic ovaries Sclerocystic Ovaries 21411543
Polycystic ovary syndrome Polycystic Ovary Syndrome 21411543

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